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8YT4
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BU of 8yt4 by Molmil
Structure of Aquifex aeolicus Lumazine Synthase by Cryo-Electron Microscopy to 1.42 Angstrom Resolution
分子名称: 6,7-dimethyl-8-ribityllumazine synthase, PHOSPHATE ION
著者Savva, C.G, Sobhy, M.A, De Biasio, A, Hamdan, S.M.
登録日2024-03-24
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (1.42 Å)
主引用文献Atomic Resolution structure of Aquifex aeolicus Lumazine Synthase by Cryo-Electron Microscopy
To Be Published
4H56
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BU of 4h56 by Molmil
Crystal structure of the Clostridium perfringens NetB toxin in the membrane inserted form
分子名称: Necrotic enteritis toxin B
著者Savva, C.G, Fernandes da Costa, S.P, Bokori-Brown, M, Naylor, C, Cole, A.R, Moss, D.S, Titball, R.W, Basak, A.K.
登録日2012-09-18
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Molecular Architecture and Functional Analysis of NetB, a Pore-forming Toxin from Clostridium perfringens.
J.Biol.Chem., 288, 2013
6RB9
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BU of 6rb9 by Molmil
The pore structure of Clostridium perfringens epsilon toxin
分子名称: Epsilon-toxin type B
著者Savva, C.G, Clark, A.R, Naylor, C.E, Popoff, M.R, Moss, D.S, Basak, A.K, Titball, R.W, Bokori-Brown, M.
登録日2019-04-09
公開日2019-06-19
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The pore structure of Clostridium perfringens epsilon toxin.
Nat Commun, 10, 2019
5GAQ
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BU of 5gaq by Molmil
Cryo-EM structure of the Lysenin Pore
分子名称: Lysenin
著者Savva, C.G, Bokori-Brown, M, Martin, T.G, Titball, R.W, Naylor, C.E, Basak, A.K.
登録日2016-01-05
公開日2016-04-06
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Cryo-EM structure of lysenin pore elucidates membrane insertion by an aerolysin family protein
Nat Commun, 7, 2016
3ZIX
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BU of 3zix by Molmil
Clostridium perfringens Enterotoxin with the N-terminal 37 residues deleted
分子名称: HEAT-LABILE ENTEROTOXIN B CHAIN, HEXAETHYLENE GLYCOL
著者Yelland, T, Naylor, C.E, Savva, C.G, Basak, A.K.
登録日2013-01-14
公開日2014-01-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a C. Perfringens Enterotoxin Mutant in Complex with a Modified Claudin-2 Extracellular Loop 2
J.Mol.Biol., 426, 2014
3J81
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BU of 3j81 by Molmil
CryoEM structure of a partial yeast 48S preinitiation complex
分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ...
著者Hussain, T, Llacer, J.L, Fernandez, I.S, Savva, C.G, Ramakrishnan, V.
登録日2014-08-29
公開日2014-11-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural changes enable start codon recognition by the eukaryotic translation initiation complex.
Cell(Cambridge,Mass.), 159, 2014
3J80
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BU of 3j80 by Molmil
CryoEM structure of 40S-eIF1-eIF1A preinitiation complex
分子名称: 18S rRNA, MAGNESIUM ION, RACK1, ...
著者Hussain, T, Llacer, J.L, Fernandez, I.S, Savva, C.G, Ramakrishnan, V.
登録日2014-08-28
公開日2014-11-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Structural changes enable start codon recognition by the eukaryotic translation initiation complex.
Cell(Cambridge,Mass.), 159, 2014
6Z2J
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BU of 6z2j by Molmil
The structure of the dimeric HDAC1/MIDEAS/DNTTIP1 MiDAC deacetylase complex
分子名称: Deoxynucleotidyltransferase terminal-interacting protein 1, Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, ...
著者Fairall, L, Saleh, A, Ragan, T.J, Millard, C.J, Savva, C.G, Schwabe, J.W.R.
登録日2020-05-16
公開日2020-07-08
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献The MiDAC histone deacetylase complex is essential for embryonic development and has a unique multivalent structure.
Nat Commun, 11, 2020
6Z2K
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BU of 6z2k by Molmil
The structure of the tetrameric HDAC1/MIDEAS/DNTTIP1 MiDAC deacetylase complex
分子名称: Deoxynucleotidyltransferase terminal-interacting protein 1, Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, ...
著者Fairall, L, Saleh, A, Ragan, T.J, Millard, C.J, Savva, C.G, Schwabe, J.W.R.
登録日2020-05-16
公開日2020-07-08
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献The MiDAC histone deacetylase complex is essential for embryonic development and has a unique multivalent structure.
Nat Commun, 11, 2020
2YPW
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BU of 2ypw by Molmil
Atomic model for the N-terminus of TraO fitted in the full-length structure of the bacterial pKM101 type IV secretion system core complex
分子名称: TRAO
著者Rivera-Calzada, A, Fronzes, R, Savva, C.G, Chandran, V, Lian, P.W, Laeremans, T, Pardon, E, Steyaert, J, Remaut, H, Waksman, G, Orlova, E.V.
登録日2012-11-02
公開日2013-04-03
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (12.4 Å)
主引用文献Structure of a Bacterial Type Iv Secretion Core Complex at Subnanometre Resolution.
Embo J., 32, 2013
7AOA
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BU of 7aoa by Molmil
Structure of the extended MTA1/HDAC1/MBD2/RBBP4 NURD deacetylase complex
分子名称: Histone deacetylase 1, Histone-binding protein RBBP4, INOSITOL HEXAKISPHOSPHATE, ...
著者Millard, C.J, Fairall, L, Ragan, T.J, Savva, C.G, Schwabe, J.W.R.
登録日2020-10-14
公開日2020-11-11
最終更新日2020-12-30
実験手法ELECTRON MICROSCOPY (19.4 Å)
主引用文献The topology of chromatin-binding domains in the NuRD deacetylase complex.
Nucleic Acids Res., 48, 2020
7AO9
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BU of 7ao9 by Molmil
Structure of the core MTA1/HDAC1/MBD2 NURD deacetylase complex
分子名称: Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, Metastasis-associated protein MTA1, ...
著者Millard, C.J, Fairall, L, Ragan, T.J, Savva, C.G, Schwabe, J.W.R.
登録日2020-10-14
公開日2020-11-11
最終更新日2020-12-30
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献The topology of chromatin-binding domains in the NuRD deacetylase complex.
Nucleic Acids Res., 48, 2020
7AO8
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BU of 7ao8 by Molmil
Structure of the MTA1/HDAC1/MBD2 NURD deacetylase complex
分子名称: Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, Metastasis-associated protein MTA1, ...
著者Millard, C.J, Fairall, L, Ragan, T.J, Savva, C.G, Schwabe, J.W.R.
登録日2020-10-14
公開日2020-11-11
最終更新日2020-12-30
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献The topology of chromatin-binding domains in the NuRD deacetylase complex.
Nucleic Acids Res., 48, 2020
3ZBI
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BU of 3zbi by Molmil
Fitting result in the O-layer of the subnanometer structure of the bacterial pKM101 type IV secretion system core complex digested with elastase
分子名称: TRAF PROTEIN, TRAN PROTEIN, TRAO PROTEIN
著者Rivera-Calzada, A, Fronzes, R, Savva, C.G, Chandran, V, Lian, P.W, Laeremans, T, Pardon, E, Steyaert, J, Remaut, H, Waksman, G, Orlova, E.V.
登録日2012-11-10
公開日2013-04-03
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Structure of a Bacterial Type Iv Secretion Core Complex at Subnanometre Resolution.
Embo J., 32, 2013
3ZIW
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BU of 3ziw by Molmil
Clostridium perfringens enterotoxin, D48A mutation and N-terminal 37 residues deleted
分子名称: HEAT-LABILE ENTEROTOXIN B CHAIN, HEXAETHYLENE GLYCOL
著者Yelland, T, Naylor, C.E, Savva, C.G, Basak, A.K.
登録日2013-01-14
公開日2014-01-29
最終更新日2014-08-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a C. Perfringens Enterotoxin Mutant in Complex with a Modified Claudin-2 Extracellular Loop 2
J.Mol.Biol., 426, 2014
3ZJX
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BU of 3zjx by Molmil
Clostridium perfringens epsilon toxin mutant H149A bound to octyl glucoside
分子名称: EPSILON-TOXIN, PHOSPHATE ION, octyl beta-D-glucopyranoside
著者Bokori-Brown, M, Kokkinidou, M.C, Savva, C.G, Fernandes da Costa, S.P, Naylor, C.E, Cole, A.R, Basak, A.K, Titball, R.W.
登録日2013-01-20
公開日2013-03-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Clostridium Perfringens Epsilon Toxin H149A Mutant as a Platform for Receptor Binding Studies.
Protein Sci., 22, 2013
3ZBJ
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BU of 3zbj by Molmil
Fitting results in the I-layer of the subnanometer structure of the bacterial pKM101 type IV secretion system core complex digested with elastase
分子名称: TRAO PROTEIN
著者Rivera-Calzada, A, Fronzes, R, Savva, C.G, Chandran, V, Lian, P.W, Laeremans, T, Pardon, E, Steyaert, J, Remaut, H, Waksman, G, Orlova, E.V.
登録日2012-11-10
公開日2013-04-03
最終更新日2017-08-30
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Structure of a Bacterial Type Iv Secretion Core Complex at Subnanometre Resolution.
Embo J., 32, 2013
5IT9
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BU of 5it9 by Molmil
Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES.
分子名称: 18S ribosomal RNA, Cricket paralysis virus IRES RNA, MAGNESIUM ION, ...
著者Murray, J, Savva, C.G, Shin, B.S, Dever, T.E, Ramakrishnan, V, Fernandez, I.S.
登録日2016-03-16
公開日2016-05-18
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural characterization of ribosome recruitment and translocation by type IV IRES.
Elife, 5, 2016
5IT7
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BU of 5it7 by Molmil
Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES and eEF2
分子名称: (2S)-1-amino-N,N,N-trimethyl-1-oxobutan-2-aminium, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Murray, J, Savva, C.G, Shin, B.S, Dever, T.E, Ramakrishnan, V, Fernandez, I.S.
登録日2016-03-16
公開日2016-05-18
最終更新日2018-11-21
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural characterization of ribosome recruitment and translocation by type IV IRES.
Elife, 5, 2016
1NL3
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BU of 1nl3 by Molmil
CRYSTAL STRUCTURE OF THE SECA PROTEIN TRANSLOCATION ATPASE FROM MYCOBACTERIUM TUBERCULOSIS in APO FORM
分子名称: PREPROTEIN TRANSLOCASE SECA 1 SUBUNIT
著者Sharma, V, Arockiasamy, A, Ronning, D.R, Savva, C.G, Holzenburg, A, Braunstein, M, Jacobs Jr, W.R, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2003-01-06
公開日2003-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of M. tuberculosis SecA, A Preprotein Translocating ATPase
Proc.Natl.Acad.Sci.USA, 100, 2003
1NKT
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BU of 1nkt by Molmil
CRYSTAL STRUCTURE OF THE SECA PROTEIN TRANSLOCATION ATPASE FROM MYCOBACTERIUM TUBERCULOSIS COMPLEX WITH ADPBS
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Preprotein translocase secA 1 subunit
著者Sharma, V, Arockiasamy, A, Ronning, D.R, Savva, C.G, Holzenburg, A, Braunstein, M, Jacobs Jr, W.R, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2003-01-03
公開日2003-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Crystal Structure of M. tuberculosis SecA, A Preprotein Translocating ATPase
Proc.Natl.Acad.Sci.USA, 100, 2003
7ZDQ
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BU of 7zdq by Molmil
Cryo-EM structure of Human ACE2 bound to a high-affinity SARS CoV-2 mutant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike protein S1
著者Bate, N, Savva, C.G, Moody, P.C.E, Brown, E.A, Schwabe, W.R, Brindle, N.P.J, Ball, J.K, Sale, J.E.
登録日2022-03-29
公開日2022-05-18
最終更新日2022-08-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献In vitro evolution predicts emerging SARS-CoV-2 mutations with high affinity for ACE2 and cross-species binding.
Plos Pathog., 18, 2022
7ZUB
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BU of 7zub by Molmil
Cryo-EM structure of the indirubin-bound Hsp90-XAP2-AHR complex
分子名称: (3~{Z})-3-(3-oxidanylidene-1~{H}-indol-2-ylidene)-1~{H}-indol-2-one, ADENOSINE-5'-DIPHOSPHATE, AH receptor-interacting protein, ...
著者Gruszczyk, J, Savva, C.G, Lai-Kee-Him, J, Bous, J, Ancelin, A, Kwong, H.S, Grandvuillemin, L, Bourguet, W.
登録日2022-05-12
公開日2022-11-23
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Cryo-EM structure of the agonist-bound Hsp90-XAP2-AHR cytosolic complex.
Nat Commun, 13, 2022
7QER
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BU of 7qer by Molmil
human Connexin 26 dodecamer at 55mm Hg PCO2, pH7.4
分子名称: DODECYL-BETA-D-MALTOSIDE, Gap junction beta-2 protein, PHOSPHATIDYLETHANOLAMINE
著者Brotherton, D.H, Cameron, A.D, Savva, C.G, Ragan, T.J.
登録日2021-12-03
公開日2022-03-30
最終更新日2022-05-18
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Conformational changes and CO 2 -induced channel gating in connexin26.
Structure, 30, 2022
7QET
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BU of 7qet by Molmil
human Connexin 26 dodecamer at 20mmHg PCO2, pH7.4
分子名称: DODECYL-BETA-D-MALTOSIDE, Gap junction beta-2 protein, PHOSPHATIDYLETHANOLAMINE
著者Brotherton, D.H, Cameron, A.D, Savva, C.G, Ragan, T.J.
登録日2021-12-03
公開日2022-03-30
最終更新日2022-05-18
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Conformational changes and CO 2 -induced channel gating in connexin26.
Structure, 30, 2022

 

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