Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1ZT3
DownloadVisualize
BU of 1zt3 by Molmil
C-terminal domain of Insulin-like Growth Factor Binding Protein-1 isolated from human amniotic fluid
Descriptor: 1,4-DIETHYLENE DIOXIDE, Insulin-like growth factor binding protein 1
Authors:Sala, A, Capaldi, S, Campagnoli, M, Faggion, B, Labo, S, Perduca, M, Romano, A, Carrizo, M.E, Valli, M, Visai, L, Minchiotti, L, Galliano, M, Monaco, H.L.
Deposit date:2005-05-26
Release date:2005-06-28
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Properties of the C-terminal Domain of Insulin-like Growth Factor-binding Protein-1 Isolated from Human Amniotic Fluid
J.Biol.Chem., 280, 2005
1ZT5
DownloadVisualize
BU of 1zt5 by Molmil
C-terminal domain of Insulin-like Growth Factor Binding Protein-1 isolated from human amniotic fluid complexed with Iron(II)
Descriptor: 1,4-DIETHYLENE DIOXIDE, FE (II) ION, Insulin-like growth factor binding protein 1
Authors:Sala, A, Capaldi, S, Campagnoli, M, Faggion, B, Labo, S, Perduca, M, Romano, A, Carrizo, M.E, Valli, M, Visai, L, Minchiotti, L, Galliano, M, Monaco, H.L.
Deposit date:2005-05-26
Release date:2005-06-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.818 Å)
Cite:Structure and Properties of the C-terminal Domain of Insulin-like Growth Factor-binding Protein-1 Isolated from Human Amniotic Fluid
J.Biol.Chem., 280, 2005
4L1G
DownloadVisualize
BU of 4l1g by Molmil
Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase from Bacillus cereus
Descriptor: ACETATE ION, Peptidoglycan N-acetylglucosamine deacetylase, SULFATE ION
Authors:Tsalafouta, A, Fadouloglou, V.E, Kokkinidis, M.
Deposit date:2013-06-03
Release date:2014-06-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.336 Å)
Cite:Unusual alpha-Carbon Hydroxylation of Proline Promotes Active-Site Maturation.
J.Am.Chem.Soc., 139, 2017
4X8K
DownloadVisualize
BU of 4x8k by Molmil
Mycobacterium tuberculosis RbpA-SID in complex with SigmaA domain 2
Descriptor: 1,2-ETHANEDIOL, RNA polymerase sigma factor SigA, RNA polymerase-binding protein RbpA, ...
Authors:Hubin, E.A, Flack, J.E, Tabib-Salazar, A, Paget, M.S, Darst, S.A, Campbell, E.A.
Deposit date:2014-12-10
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Structural, functional, and genetic analyses of the actinobacterial transcription factor RbpA.
Proc.Natl.Acad.Sci.USA, 112, 2015
7NNH
DownloadVisualize
BU of 7nnh by Molmil
Cryo-EM structure of VAR2CSA FCR3 domain DBL5/6
Descriptor: Erythrocyte membrane protein 1
Authors:Wang, K.T, Dagil, R, Salanti, A, Gourdon, P.E.
Deposit date:2021-02-24
Release date:2021-06-02
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding.
Nat Commun, 12, 2021
8C5R
DownloadVisualize
BU of 8c5r by Molmil
Omicron B.1.1.529 2 RBD up conformation
Descriptor: Spike glycoprotein
Authors:Raghavan, S.S.R, Walker, M.R, Salanti, A, Barfod, L.K, Wang, K.T.
Deposit date:2023-01-10
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Omicron B.1.1.529 2 RBD up conformation
To Be Published
2M6O
DownloadVisualize
BU of 2m6o by Molmil
The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
Descriptor: Uncharacterized protein
Authors:Liu, B, Tabib-Salazar, A, Doughty, P, Lewis, R, Ghosh, S, Parsy, M, Simpson, P, Matthews, S, Paget, M.
Deposit date:2013-04-06
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase.
Nucleic Acids Res., 41, 2013
8P2E
DownloadVisualize
BU of 8p2e by Molmil
Homotypic interacting B1 fab bound to Chondroitin Sulfate A
Descriptor: B1 fab heavy, B1 fab light
Authors:Raghavan, S.S.R, Dagil, R, Wang, K.T, Salanti, A.
Deposit date:2023-05-16
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of homotypic B1 fabs bound to Chondroiting Sulfate A
To Be Published
1O89
DownloadVisualize
BU of 1o89 by Molmil
Crystal structure of E. COLI K-12 yhdH
Descriptor: YHDH
Authors:Sulzenbacher, G, Roig-Zamboni, V, Pagot, F, Grisel, S, Salamoni, A, Valencia, C, Bignon, C, Vincentelli, R, Tegoni, M, Cambillau, C.
Deposit date:2002-11-26
Release date:2004-02-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of the Escherichia Coli Yhdh, a Putative Quinone Oxidoreductase
Acta Crystallogr.,Sect.D, 60, 2004
7B52
DownloadVisualize
BU of 7b52 by Molmil
VAR2CSA full ectodomain
Descriptor: Erythrocyte membrane protein 1
Authors:Wang, K.T, Gourdon, P.E, Dagil, R, Salanti, A.
Deposit date:2020-12-03
Release date:2021-04-21
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding.
Nat Commun, 12, 2021
7B54
DownloadVisualize
BU of 7b54 by Molmil
VAR2CSA full ectodomain in present of plCS, DBL1-DBL4
Descriptor: VAR2CSA in presence of plCS, DBl1-DBL4,Erythrocyte membrane protein 1
Authors:Wang, K.T, Dagil, R, Gourdon, P.E, Salanti, A.
Deposit date:2020-12-03
Release date:2021-06-02
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding.
Nat Commun, 12, 2021
5MWA
DownloadVisualize
BU of 5mwa by Molmil
human sEH Phosphatase in complex with 3-4-3,4-dichlorophenyl-5-phenyl-1,3-oxazol-2-yl-benzoic-acid
Descriptor: 3-[4-(3,4-dichlorophenyl)-5-phenyl-1,3-oxazol-2-yl]benzoic acid, Bifunctional epoxide hydrolase 2, MAGNESIUM ION
Authors:Kramer, J.S, Pogoryelov, D, Sorrell, F.J, Fox, N, Chaikuad, A, Knapp, S, Proschak, E.
Deposit date:2017-01-18
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of first in vivo active inhibitors of soluble epoxide hydrolase (sEH) phosphatase domain.
J.Med.Chem., 2019
5VWN
DownloadVisualize
BU of 5vwn by Molmil
Triosephosphate isomerases deletion loop 3 from Trichomonas vaginalis
Descriptor: SODIUM ION, Triosephosphate isomerase
Authors:Lara-Gonzalez, S, Rojas-Mendez, K, Jimenez-Sandoval, P, Estrella-Hernandez, P, Brieba, L.G.
Deposit date:2017-05-22
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:A competent catalytic active site is necessary for substrate induced dimer assembly in triosephosphate isomerase.
Biochim. Biophys. Acta, 1865, 2017
6PZQ
DownloadVisualize
BU of 6pzq by Molmil
Structure of the human respiratory syncytial virus M2-1 protein in complex with a short positive-sense gene-end RNA
Descriptor: Matrix M2-1, RNA (5'-R(P*GP*UP*UP*AP*AP*U)-3'), ZINC ION
Authors:Gao, Y, Cao, D, Liang, B.
Deposit date:2019-08-01
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Structure of the Human Respiratory Syncytial Virus M2-1 Protein in Complex with a Short Positive-Sense Gene-End RNA.
Structure, 28, 2020
6ZCI
DownloadVisualize
BU of 6zci by Molmil
Crystal structure of BRD4-BD1 in complex with NVS-BET-1
Descriptor: (4~{R})-4-(4-chlorophenyl)-1-cyclopropyl-5-(1,5-dimethyl-6-oxidanylidene-pyridin-3-yl)-3-methyl-4~{H}-pyrrolo[3,4-c]pyrazol-6-one, Bromodomain-containing protein 4
Authors:Faller, M.
Deposit date:2020-06-11
Release date:2020-12-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.976 Å)
Cite:BET bromodomain inhibitors regulate keratinocyte plasticity.
Nat.Chem.Biol., 17, 2021
6ID4
DownloadVisualize
BU of 6id4 by Molmil
Defining the structural basis for human alloantibody binding to human leukocyte antigen allele HLA-A*11:01
Descriptor: Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Lescar, J, Wong, Y.H, Liew, C.W, Gu, Y, MacAry, P.A.
Deposit date:2018-09-08
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Defining the structural basis for human alloantibody binding to human leukocyte antigen allele HLA-A*11:01.
Nat Commun, 10, 2019
6FI7
DownloadVisualize
BU of 6fi7 by Molmil
E.coli Sigma factor S (RpoS) Region 4
Descriptor: RNA polymerase sigma factor RpoS
Authors:Liu, B, Matthews, S.J.
Deposit date:2018-01-17
Release date:2018-06-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:T7 phage factor required for managing RpoS inEscherichia coli.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1O8C
DownloadVisualize
BU of 1o8c by Molmil
CRYSTAL STRUCTURE OF E. COLI K-12 YHDH WITH BOUND NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, YHDH
Authors:Sulzenbacher, G, Roig-Zamboni, V, Pagot, F, Grisel, S, Salamoni, A, Valencia, C, Bignon, C, Vincentelli, R, Tegoni, M, Cambillau, C.
Deposit date:2002-11-26
Release date:2004-05-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Escherichia Coli Yhdh, a Putative Quinone Oxidoreductase
Acta Crystallogr.,Sect.D, 60, 2004
2M6P
DownloadVisualize
BU of 2m6p by Molmil
The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
Descriptor: uncharacterized protein Mb2076
Authors:Liu, B, Parsy, M, Paget, M, Matthews, S.
Deposit date:2013-04-06
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase.
Nucleic Acids Res., 41, 2013
7QU8
DownloadVisualize
BU of 7qu8 by Molmil
ADGRG3/GPR97 Extracellular Region
Descriptor: Adhesion G protein-coupled receptor G3
Authors:Zheng-Gerard, C, Chu, T.Y, El Omari, K, Lin, H.H, Seiradake, E.
Deposit date:2022-01-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:GPR97-mediated PAR2 transactivation via a mPR3-associated macromolecular complex induces inflammatory activation of human neutrophils
Nat Commun, 2022
7Z1H
DownloadVisualize
BU of 7z1h by Molmil
VAR2CSA APO
Descriptor: VAR2CSA APO
Authors:Raghavan, S.S.R, Wang, K.T.
Deposit date:2022-02-24
Release date:2022-11-02
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Cryo-EM reveals the conformational epitope of human monoclonal antibody PAM1.4 broadly reacting with polymorphic malarial protein VAR2CSA.
Plos Pathog., 18, 2022
7Z12
DownloadVisualize
BU of 7z12 by Molmil
VAR2 complex with PAM1.4
Descriptor: PAM1.4, Heavy Chain, light Chain, ...
Authors:Raghavan, S.S.R, Wang, K.T.
Deposit date:2022-02-24
Release date:2022-11-02
Last modified:2022-11-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM reveals the conformational epitope of human monoclonal antibody PAM1.4 broadly reacting with polymorphic malarial protein VAR2CSA.
Plos Pathog., 18, 2022
5O6Y
DownloadVisualize
BU of 5o6y by Molmil
Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase in complex with 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide, ...
Authors:Fadouloglou, V.E, Kotsifaki, D, Kokkinidis, M.
Deposit date:2017-06-07
Release date:2018-06-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase in complex with 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide
To Be Published
1OJ7
DownloadVisualize
BU of 1oj7 by Molmil
STRUCTURAL GENOMICS, UNKNOWN FUNCTION CRYSTAL STRUCTURE OF E. COLI K-12 YQHD
Descriptor: 5,6-DIHYDROXY-NADP, BORIC ACID, CHLORIDE ION, ...
Authors:Sulzenbacher, G, Perrier, S, Roig-Zamboni, V, Pagot, F, Grisel, S, Salamoni, A, Valencia, C, Bignon, C, Vincentelli, R, Tegoni, M, Cambillau, C.
Deposit date:2003-07-03
Release date:2004-07-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of E.Coli Alcohol Dehydrogenase Yqhd: Evidence of a Covalently Modified Nadp Coenzyme
J.Mol.Biol., 342, 2004

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon