Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8U27
DownloadVisualize
BU of 8u27 by Molmil
Bcl-2-xL complexed with compound 35
Descriptor: Apoptosis regulator Bcl-2, Bcl-2-like protein 1 chimera, propan-2-yl {4-[(5S)-1-(4-bromobenzoyl)-5-phenyl-4,5-dihydro-1H-pyrazol-3-yl]phenyl}carbamate
Authors:Rizo, J, Pan, Y.-Z.
Deposit date:2023-09-05
Release date:2023-09-13
Last modified:2023-11-08
Method:SOLUTION NMR
Cite:Structural insights for selective disruption of Beclin 1 binding to Bcl-2.
Commun Biol, 6, 2023
7UDB
DownloadVisualize
BU of 7udb by Molmil
Cryo-EM structure of a synaptobrevin-Munc18-1-syntaxin-1 complex class 2
Descriptor: Synaptobrevin-2, Syntaxin-1A, Syntaxin-binding protein 1
Authors:Rizo, J, Bai, X, Stepien, K.P, Xu, J, Zhang, X.
Deposit date:2022-03-18
Release date:2022-04-06
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:SNARE assembly enlightened by cryo-EM structures of a synaptobrevin-Munc18-1-syntaxin-1 complex.
Sci Adv, 8, 2022
7UDC
DownloadVisualize
BU of 7udc by Molmil
cryo-EM structures of a synaptobrevin-Munc18-1-syntaxin-1 complex class1
Descriptor: Synaptobrevin-2, Syntaxin-1A, Syntaxin-binding protein 1
Authors:Rizo, J, Bai, X, Stepien, K.P, Xu, J, Zhang, X.
Deposit date:2022-03-18
Release date:2022-04-06
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:SNARE assembly enlightened by cryo-EM structures of a synaptobrevin-Munc18-1-syntaxin-1 complex.
Sci Adv, 8, 2022
4OMO
DownloadVisualize
BU of 4omo by Molmil
Crystal structure of the c-Src tyrosine kinase SH3 domain mutant Q128E
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-01-27
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
4OMN
DownloadVisualize
BU of 4omn by Molmil
Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant Q128E
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Proto-oncogene tyrosine-protein kinase Src, ...
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-01-27
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
4OMP
DownloadVisualize
BU of 4omp by Molmil
Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant Q128K
Descriptor: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-01-27
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
4QT7
DownloadVisualize
BU of 4qt7 by Molmil
Crystal structure of the c-Src SH3 domain in complex with a peptide from the Hepatitis C virus NS5A-protein
Descriptor: NS5A, Proto-oncogene tyrosine-protein kinase Src
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-07-07
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of the c-Src-SH3 domain in complex with a proline-rich motif of NS5A protein from the hepatitis C virus.
J.Struct.Biol., 189, 2015
4OML
DownloadVisualize
BU of 4oml by Molmil
Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant Q128R
Descriptor: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-01-27
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
5UF7
DownloadVisualize
BU of 5uf7 by Molmil
CRYSTAL STRUCTURE OF MUNC13-1 MUN DOMAIN
Descriptor: Protein unc-13 homolog A
Authors:Tomchick, D.R, Rizo, J, Xu, J.
Deposit date:2017-01-03
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.896 Å)
Cite:Mechanistic insights into neurotransmitter release and presynaptic plasticity from the crystal structure of Munc13-1 C1C2BMUN.
Elife, 6, 2017
5UE8
DownloadVisualize
BU of 5ue8 by Molmil
The crystal structure of Munc13-1 C1C2BMUN domain
Descriptor: CHLORIDE ION, Protein unc-13 homolog A, ZINC ION
Authors:Tomchick, D.R, Rizo, J, Xu, J.
Deposit date:2016-12-29
Release date:2017-02-15
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Mechanistic insights into neurotransmitter release and presynaptic plasticity from the crystal structure of Munc13-1 C1C2BMUN.
Elife, 6, 2017
4NPJ
DownloadVisualize
BU of 4npj by Molmil
Extended-Synaptotagmin 2, C2A- and C2B-domains
Descriptor: ACETATE ION, CHLORIDE ION, Extended synaptotagmin-2, ...
Authors:Tomchick, D.R, Rizo, J, Xu, J.
Deposit date:2013-11-21
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structure and ca(2+)-binding properties of the tandem c2 domains of e-syt2.
Structure, 22, 2014
4Y21
DownloadVisualize
BU of 4y21 by Molmil
Crystal Structure of Munc13-1 MUN domain
Descriptor: Protein unc-13 homolog A
Authors:Yang, X.Y, Wang, S, Sheng, Y, Zhang, M, Zou, W.J, Wu, L.J, Kang, L.J, Rizo, J, Zhang, R.G, Xu, T, Ma, C.
Deposit date:2015-02-09
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Syntaxin opening by the MUN domain underlies the function of Munc13 in synaptic-vesicle priming.
Nat.Struct.Mol.Biol., 22, 2015
6ANK
DownloadVisualize
BU of 6ank by Molmil
Synaptotagmin-7, C2A- and C2B-domains
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Synaptotagmin-7
Authors:Tomchick, D.R, Rizo, J, Voleti, R.
Deposit date:2017-08-13
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.254 Å)
Cite:Exceptionally tight membrane-binding may explain the key role of the synaptotagmin-7 C2A domain in asynchronous neurotransmitter release.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6ANJ
DownloadVisualize
BU of 6anj by Molmil
Synaptotagmin-7, C2A domain
Descriptor: ACETATE ION, CALCIUM ION, Synaptotagmin-7, ...
Authors:Tomchick, D.R, Rizo, J, Voleti, R.
Deposit date:2017-08-13
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Exceptionally tight membrane-binding may explain the key role of the synaptotagmin-7 C2A domain in asynchronous neurotransmitter release.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1BR0
DownloadVisualize
BU of 1br0 by Molmil
THREE DIMENSIONAL STRUCTURE OF THE N-TERMINAL DOMAIN OF SYNTAXIN 1A
Descriptor: PROTEIN (SYNTAXIN 1-A)
Authors:Fernandez, I, Ubach, J, Dubulova, I, Zhang, X, Sudhof, T.C, Rizo, J.
Deposit date:1998-08-25
Release date:1998-09-02
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Three-dimensional structure of an evolutionarily conserved N-terminal domain of syntaxin 1A.
Cell(Cambridge,Mass.), 94, 1998
2CJS
DownloadVisualize
BU of 2cjs by Molmil
Structural Basis for a Munc13-1 Homodimer - Munc13-1 - RIM Heterodimer Switch: C2-domains as Versatile Protein-Protein Interaction Modules
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN 2, ...
Authors:Lu, J, Machius, M, Dulubova, I, Dai, H, Sudhof, T.C, Tomchick, D.R, Rizo, J.
Deposit date:2006-04-06
Release date:2006-06-07
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Basis for a Munc13-1 Homodimer to Munc13-1/Rim Heterodimer Switch.
Plos Biol., 4, 2006
2CJT
DownloadVisualize
BU of 2cjt by Molmil
Structural Basis for a Munc13-1 Homodimer - Munc13-1 - RIM Heterodimer Switch: C2-domains as Versatile Protein-Protein Interaction Modules
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, UNC-13 HOMOLOG A
Authors:Lu, J, Machius, M, Dulubova, I, Dai, H, Sudhof, T.C, Tomchick, D.R, Rizo, J.
Deposit date:2006-04-06
Release date:2006-06-07
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural Basis for a Munc13-1 Dimeric to Munc13-1/Rim Heterodimer Switch
Plos Biol., 4, 2006
3SWH
DownloadVisualize
BU of 3swh by Molmil
Munc13-1, MUN domain, C-terminal module
Descriptor: Protein unc-13 homolog A
Authors:Tomchick, D.R, Rizo, J, Li, W.
Deposit date:2011-07-13
Release date:2011-11-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Crystal Structure of a Munc13 C-terminal Module Exhibits a Remarkable Similarity to Vesicle Tethering Factors.
Structure, 19, 2011
1S2H
DownloadVisualize
BU of 1s2h by Molmil
The Mad2 spindle checkpoint protein possesses two distinct natively folded states
Descriptor: Mitotic spindle assembly checkpoint protein MAD2A
Authors:Luo, X, Tang, Z, Xia, G, Wassmann, K, Matsumoto, T, Rizo, J, Yu, H.
Deposit date:2004-01-08
Release date:2004-03-30
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:The Mad2 spindle checkpoint protein has two distinct natively folded states.
Nat.Struct.Mol.Biol., 11, 2004
1BYN
DownloadVisualize
BU of 1byn by Molmil
SOLUTION STRUCTURE OF THE CALCIUM-BOUND FIRST C2-DOMAIN OF SYNAPTOTAGMIN I
Descriptor: CALCIUM ION, PROTEIN (SYNAPTOTAGMIN I)
Authors:Shao, X, Fernandez, I, Sudhof, T.C, Rizo, J.
Deposit date:1998-10-18
Release date:1998-10-21
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structures of the Ca2+-free and Ca2+-bound C2A domain of synaptotagmin I: does Ca2+ induce a conformational change?
Biochemistry, 37, 1998
1EHS
DownloadVisualize
BU of 1ehs by Molmil
THE STRUCTURE OF ESCHERICHIA COLI HEAT-STABLE ENTEROTOXIN B BY NUCLEAR MAGNETIC RESONANCE AND CIRCULAR DICHROISM
Descriptor: HEAT-STABLE ENTEROTOXIN B
Authors:Sukumar, M, Rizo, J, Wall, M, Dreyfus, L.A, Kupersztoch, Y.M, Gierasch, L.M.
Deposit date:1995-06-13
Release date:1995-09-15
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The structure of Escherichia coli heat-stable enterotoxin b by nuclear magnetic resonance and circular dichroism.
Protein Sci., 4, 1995
3RPB
DownloadVisualize
BU of 3rpb by Molmil
THE C2B-DOMAIN OF RABPHILIN: STRUCTURAL VARIATIONS IN A JANUS-FACED DOMAIN
Descriptor: RABPHILIN 3-A
Authors:Ubach, J, Garcia, J, Nittler, M.P, Sudhof, T.C, Rizo, J.
Deposit date:1999-04-19
Release date:1999-12-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure of the Janus-faced C2B domain of rabphilin.
Nat.Cell Biol., 1, 1999
2JQQ
DownloadVisualize
BU of 2jqq by Molmil
Solution structure of Saccharomyces cerevisiae conserved oligomeric Golgi subunit 2 protein (Cog2p)
Descriptor: Conserved oligomeric Golgi complex subunit 2
Authors:Cavanaugh, L.F, Chen, X, Pelczer, I, Rizo, J, Hughson, F.M.
Deposit date:2007-06-06
Release date:2007-06-19
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Structural analysis of conserved oligomeric Golgi complex subunit 2
J.Biol.Chem., 282, 2007
3OGM
DownloadVisualize
BU of 3ogm by Molmil
Structure of COI1-ASK1 in complex with coronatine and the JAZ1 degron
Descriptor: (1S,2S)-2-ethyl-1-({[(3aS,4S,6R,7aS)-6-ethyl-1-oxooctahydro-1H-inden-4-yl]carbonyl}amino)cyclopropanecarboxylic acid, Coronatine-insensitive protein 1, JAZ1 degron peptide, ...
Authors:Sheard, L.B, Tan, X, Mao, H, Withers, J, Ben-Nissan, G, Hinds, T.R, Hsu, F, Sharon, M, Browse, J, He, S.Y, Rizo, J, Howe, G.A, Zheng, N.
Deposit date:2010-08-17
Release date:2010-10-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.
Nature, 468, 2010
3OGL
DownloadVisualize
BU of 3ogl by Molmil
Structure of COI1-ASK1 in complex with JA-isoleucine and the JAZ1 degron
Descriptor: Coronatine-insensitive protein 1, JAZ1 incomplete degron peptide, N-({(1R,2S)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetyl)-L-isoleucine, ...
Authors:Sheard, L.B, Tan, X, Mao, H, Withers, J, Ben-Nissan, G, Hinds, T.R, Hsu, F, Sharon, M, Browse, J, He, S.Y, Rizo, J, Howe, G.A, Zheng, N.
Deposit date:2010-08-17
Release date:2010-10-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.
Nature, 468, 2010

 

1234>

219140

數據於2024-05-01公開中

PDB statisticsPDBj update infoContact PDBjnumon