Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7KIC
DownloadVisualize
BU of 7kic by Molmil
PRMT5:MEP50 Complexed with 5,5-Bicyclic Inhibitor Compound 34
Descriptor: (2R,3R,3aS,6S,6aR)-6-[(2-amino-3-bromoquinolin-7-yl)oxy]-2-(4-methyl-7H-pyrrolo[2,3-d]pyrimidin-7-yl)hexahydro-3aH-cyclopenta[b]furan-3,3a-diol, 1,2-ETHANEDIOL, Methylosome protein 50, ...
Authors:Palte, R.L.
Deposit date:2020-10-23
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:The Discovery of Two Novel Classes of 5,5-Bicyclic Nucleoside-Derived PRMT5 Inhibitors for the Treatment of Cancer.
J.Med.Chem., 64, 2021
7KD4
DownloadVisualize
BU of 7kd4 by Molmil
Structure of the C-terminal domain of the Menangle virus phosphoprotein (residues 329 -388), fused to MBP. Space group P21.
Descriptor: Maltodextrin-binding protein and Phosphoprotein fusion protein, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Webby, M.N, Kingston, R.L.
Deposit date:2020-10-08
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.312 Å)
Cite:Structural Analysis of the Menangle Virus P Protein Reveals a Soft Boundary between Ordered and Disordered Regions.
Viruses, 13, 2021
7KLK
DownloadVisualize
BU of 7klk by Molmil
Human Arginase1 Complexed with Inhibitor Compound 3a
Descriptor: 1,2-ETHANEDIOL, 3-[(2~{S},3~{R})-2-carboxypiperidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide, Arginase-1, ...
Authors:Palte, R.L.
Deposit date:2020-10-30
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structure-Based Discovery of Proline-Derived Arginase Inhibitors with Improved Oral Bioavailability for Immuno-Oncology.
Acs Med.Chem.Lett., 12, 2021
7KLM
DownloadVisualize
BU of 7klm by Molmil
Human Arginase1 Complexed with Inhibitor Compound 24a
Descriptor: 3-[(2~{S},3~{R},4~{R})-4-[[(2~{S})-2-azanyl-3-methyl-butanoyl]amino]-2-carboxy-pyrrolidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boron, Arginase-1, MANGANESE (II) ION
Authors:Palte, R.L.
Deposit date:2020-10-30
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure-Based Discovery of Proline-Derived Arginase Inhibitors with Improved Oral Bioavailability for Immuno-Oncology.
Acs Med.Chem.Lett., 12, 2021
7KLL
DownloadVisualize
BU of 7kll by Molmil
Human Arginase1 Complexed with Inhibitor Compound 18
Descriptor: 3-[(2~{S},3~{R},4~{R})-4-azanyl-2-carboxy-pyrrolidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boron, Arginase-1, MANGANESE (II) ION
Authors:Palte, R.L.
Deposit date:2020-10-30
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure-Based Discovery of Proline-Derived Arginase Inhibitors with Improved Oral Bioavailability for Immuno-Oncology.
Acs Med.Chem.Lett., 12, 2021
7KD5
DownloadVisualize
BU of 7kd5 by Molmil
Structure of the C-terminal domain of the Menangle virus phosphoprotein (residues 329 -388), fused to MBP. Space group P212121
Descriptor: 1,2-ETHANEDIOL, Maltodextrin-binding protein and Phosphoprotein fusion protein, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID), ...
Authors:Webby, M.N, Kingston, R.L.
Deposit date:2020-10-08
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Structural Analysis of the Menangle Virus P Protein Reveals a Soft Boundary between Ordered and Disordered Regions.
Viruses, 13, 2021
7K4I
DownloadVisualize
BU of 7k4i by Molmil
Human Arginase 1 in complex with compound 06.
Descriptor: 3-[(1~{S},2~{S},5~{R})-2-carboxy-6-thia-3-azabicyclo[3.2.0]heptan-1-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide, Arginase-1, MANGANESE (II) ION
Authors:Palte, R.L.
Deposit date:2020-09-15
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Comprehensive Strategies to Bicyclic Prolines: Applications in the Synthesis of Potent Arginase Inhibitors.
Acs Med.Chem.Lett., 12, 2021
7K4G
DownloadVisualize
BU of 7k4g by Molmil
Human Arginase 1 in complex with compound 01.
Descriptor: 3-[(2~{S},3~{R})-2-carboxypyrrolidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide, Arginase-1, MANGANESE (II) ION
Authors:Palte, R.L.
Deposit date:2020-09-15
Release date:2021-12-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comprehensive Strategies to Bicyclic Prolines: Applications in the Synthesis of Potent Arginase Inhibitors.
Acs Med.Chem.Lett., 12, 2021
7K4H
DownloadVisualize
BU of 7k4h by Molmil
Human Arginase 1 in complex with compound 04.
Descriptor: 3-[(1~{R},5~{S},8~{R})-5-carboxy-2,6-diazabicyclo[3.2.1]octan-8-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide, Arginase-1, MANGANESE (II) ION
Authors:Palte, R.L.
Deposit date:2020-09-15
Release date:2021-12-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Comprehensive Strategies to Bicyclic Prolines: Applications in the Synthesis of Potent Arginase Inhibitors.
Acs Med.Chem.Lett., 12, 2021
7K4J
DownloadVisualize
BU of 7k4j by Molmil
Human Arginase 1 in complex with compound 51.
Descriptor: 3-[(1~{S},2~{S},5~{R})-2-carboxy-3,6-diazabicyclo[3.2.0]heptan-1-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide, Arginase-1, MANGANESE (II) ION
Authors:Palte, R.L.
Deposit date:2020-09-15
Release date:2021-12-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Comprehensive Strategies to Bicyclic Prolines: Applications in the Synthesis of Potent Arginase Inhibitors.
Acs Med.Chem.Lett., 12, 2021
7K4K
DownloadVisualize
BU of 7k4k by Molmil
Human Arginase 1 in complex with compound 52.
Descriptor: 3-[(3~{a}~{S},4~{S},6~{a}~{R})-4-carboxy-2,3,4,5,6,6~{a}-hexahydro-1~{H}-pyrrolo[2,3-c]pyrrol-3~{a}-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide, Arginase-1, MANGANESE (II) ION
Authors:Palte, R.L.
Deposit date:2020-09-15
Release date:2021-12-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Comprehensive Strategies to Bicyclic Prolines: Applications in the Synthesis of Potent Arginase Inhibitors.
Acs Med.Chem.Lett., 12, 2021
7KSL
DownloadVisualize
BU of 7ksl by Molmil
Substrate-free human mitochondrial LONP1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C.
Deposit date:2020-11-23
Release date:2020-12-09
Last modified:2022-06-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Nat Commun, 12, 2021
7KSM
DownloadVisualize
BU of 7ksm by Molmil
Human mitochondrial LONP1 with endogenous substrate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Lon protease homolog, ...
Authors:Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C.
Deposit date:2020-11-23
Release date:2020-12-02
Last modified:2022-06-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Nat Commun, 12, 2021
7KRZ
DownloadVisualize
BU of 7krz by Molmil
Human mitochondrial LONP1 in complex with Bortezomib
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Endogenous co-purified substrate, ...
Authors:Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C.
Deposit date:2020-11-20
Release date:2021-02-24
Last modified:2022-06-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Nat Commun, 12, 2021
7L1G
DownloadVisualize
BU of 7l1g by Molmil
PRMT5-MEP50 Complexed with SAM
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Methylosome protein 50, ...
Authors:Palte, R.L.
Deposit date:2020-12-14
Release date:2021-04-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Development of a Flexible and Robust Synthesis of Tetrahydrofuro[3,4- b ]furan Nucleoside Analogues.
J.Org.Chem., 86, 2021
7LEX
DownloadVisualize
BU of 7lex by Molmil
Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:3 mAb1 complex
Descriptor: Arginase-1, mAb1 heavy chain, mAb1 light chain
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LEY
DownloadVisualize
BU of 7ley by Molmil
Trimeric human Arginase 1 in complex with mAb5
Descriptor: Arginase-1, MANGANESE (II) ION, mAb5 heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LF0
DownloadVisualize
BU of 7lf0 by Molmil
Trimeric human Arginase 1 in complex with mAb2
Descriptor: Arginase-1, mAb2 heavy chain, mAb2 light chain
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LF2
DownloadVisualize
BU of 7lf2 by Molmil
Trimeric human Arginase 1 in complex with mAb4
Descriptor: Arginase-1, MANGANESE (II) ION, mAb4 monoclonal antibody heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LEZ
DownloadVisualize
BU of 7lez by Molmil
Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:2 mAb1 complex
Descriptor: Arginase-1, MANGANESE (II) ION, mAb1 heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (4.15 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LF1
DownloadVisualize
BU of 7lf1 by Molmil
Trimeric human Arginase 1 in complex with mAb3
Descriptor: Arginase-1, MANGANESE (II) ION, mAb3 heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7KUU
DownloadVisualize
BU of 7kuu by Molmil
LsfA from P. aeruginosa, a 1-Cys Prx in Sulfonic acid form
Descriptor: Alkyl hydroperoxide reductase C
Authors:AIeixo-Silva, R.L, Domingos, R.M, Netto, L.E.S.
Deposit date:2020-11-25
Release date:2021-12-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of LsfA, a 1-Cys Prx in sulfonic acid form
To Be Published
7LVS
DownloadVisualize
BU of 7lvs by Molmil
The CBP TAZ1 Domain in Complex with a CITED2-HIF-1-Alpha Fusion Peptide
Descriptor: Cbp/p300-interacting transactivator 2,Hypoxia-inducible factor 1-alpha, Histone lysine acetyltransferase CREBBP, ZINC ION
Authors:Appling, F.D, Berlow, R.B, Stanfield, R.L, Dyson, H.J, Wright, P.E.
Deposit date:2021-02-26
Release date:2021-07-28
Last modified:2021-12-15
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The molecular basis of allostery in a facilitated dissociation process.
Structure, 29, 2021
5KBK
DownloadVisualize
BU of 5kbk by Molmil
Candida Albicans Superoxide Dismutase 5 (SOD5), E110A Mutant
Descriptor: COPPER (I) ION, Cell surface Cu-only superoxide dismutase 5, SULFATE ION
Authors:Galaleldeen, A, Peterson, R.L, Villarreal, J, Taylor, A.B, Hart, P.J.
Deposit date:2016-06-03
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.411 Å)
Cite:The Phylogeny and Active Site Design of Eukaryotic Copper-only Superoxide Dismutases.
J.Biol.Chem., 291, 2016
3LV4
DownloadVisualize
BU of 3lv4 by Molmil
Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.
Descriptor: ACETATE ION, CALCIUM ION, Glycoside hydrolase YxiA
Authors:Vorobiev, S, Abashidze, M, Seetharaman, J, Belote, R.L, Ciccosanti, C, Sahdev, S, Xiao, R, Acton, T.B, Everett, J.K, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis.
To be Published

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon