Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6KWS
DownloadVisualize
BU of 6kws by Molmil
Crystal structure of Gre2 from Candida albicans
Descriptor: Methylglyoxal reductase (NADPH-dependent)
Authors:Nguyen, G.T, Chang, J.H.
Deposit date:2019-09-08
Release date:2020-09-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of NADPH-Dependent Methylglyoxal Reductase Gre2 from Candida Albicans
Crystals, 9, 2019
6KWT
DownloadVisualize
BU of 6kwt by Molmil
Crystal structure of Gre2 in complex with NADPH complex from Candida albicans
Descriptor: Methylglyoxal reductase (NADPH-dependent), NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Nguyen, G.T, Chang, J.H.
Deposit date:2019-09-08
Release date:2020-09-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Crystal Structure of NADPH-Dependent Methylglyoxal Reductase Gre2 from Candida Albicans
Crystals, 9, 2019
7BU3
DownloadVisualize
BU of 7bu3 by Molmil
Structure of alcohol dehydrogenase YjgB in complex with NADP from Escherichia coli
Descriptor: ASPARTIC ACID, Alcohol dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
Authors:Nguyen, G.T, Kim, Y.-G, Ahn, J.-W, Chang, J.H.
Deposit date:2020-04-03
Release date:2020-05-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Broad Substrate Selectivity of Alcohol Dehydrogenase YjgB from Escherichia coli .
Molecules, 25, 2020
7BU2
DownloadVisualize
BU of 7bu2 by Molmil
Structure of alcohol dehydrogenase YjgB from Escherichia coli
Descriptor: Alcohol dehydrogenase, GLYCEROL, NITRATE ION, ...
Authors:Nguyen, G.T, Kim, Y.-G, Ahn, J.-W, Chang, J.H.
Deposit date:2020-04-03
Release date:2020-05-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.553 Å)
Cite:Structural Basis for Broad Substrate Selectivity of Alcohol Dehydrogenase YjgB from Escherichia coli .
Molecules, 25, 2020
4BN5
DownloadVisualize
BU of 4bn5 by Molmil
Structure of human SIRT3 in complex with SRT1720 inhibitor
Descriptor: CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, GLYCEROL, N-{2-[3-(piperazin-1-ylmethyl)imidazo[2,1-b][1,3]thiazol-6-yl]phenyl}quinoxaline-2-carboxamide, ...
Authors:Nguyen, G.T.T, Schaefer, S, Gertz, M, Weyand, M, Steegborn, C.
Deposit date:2013-05-13
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structures of Human Sirtuin 3 Complexes with Adp-Ribose and with Carba-Nad+ and Srt1720: Binding Details and Inhibition Mechanism
Acta Crystallogr.,Sect.D, 69, 2013
4BN4
DownloadVisualize
BU of 4bn4 by Molmil
Structure of human SIRT3 in complex with ADP-ribose
Descriptor: 2-[2-[2-[2-[2-(2-hydroxyethyloxy)ethoxy]ethoxy]ethoxy]ethoxy]ethanoic acid, NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-3, MITOCHONDRIAL, ...
Authors:Nguyen, G.T.T, Schaefer, S, Gertz, M, Weyand, M, Steegborn, C.
Deposit date:2013-05-13
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of Human Sirtuin 3 Complexes with Adp-Ribose and with Carba-Nad+ and Srt1720: Binding Details and Inhibition Mechanism
Acta Crystallogr.,Sect.D, 69, 2013
7ALM
DownloadVisualize
BU of 7alm by Molmil
Crystal structure of human GDAP1 at 2.8 Angstrom resolution.
Descriptor: Ganglioside-induced differentiation-associated protein 1
Authors:Nguyen, G.T.T, Sutinen, A, Raasakka, A, Kursula, P.
Deposit date:2020-10-06
Release date:2021-02-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Complete Dimeric Human GDAP1 Core Domain Provides Insights into Ligand Binding and Clustering of Disease Mutations.
Front Mol Biosci, 7, 2020
7AIA
DownloadVisualize
BU of 7aia by Molmil
Complex of human GDAP1 with hexadecanedioic acid
Descriptor: ETHANOL, GLYCEROL, Ganglioside-induced differentiation-associated protein 1, ...
Authors:Nguyen, G.T.T, Sutinen, A, Kursula, P.
Deposit date:2020-09-26
Release date:2021-02-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the Complete Dimeric Human GDAP1 Core Domain Provides Insights into Ligand Binding and Clustering of Disease Mutations.
Front Mol Biosci, 7, 2020
4C7B
DownloadVisualize
BU of 4c7b by Molmil
Complex of human Sirt3 with Bromo-Resveratrol and Fluor-De-Lys peptide
Descriptor: 5-[(E)-2-(4-bromophenyl)ethenyl]benzene-1,3-diol, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Nguyen, G.T.T, Gertz, M, Weyand, M, Steegborn, C.
Deposit date:2013-09-20
Release date:2013-11-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Sirt3 Complexes with 4'-Bromo-Resveratrol Reveal Binding Sites and Inhibition Mechanism.
Chem.Biol., 20, 2013
4C78
DownloadVisualize
BU of 4c78 by Molmil
Complex of human Sirt3 with Bromo-Resveratrol and ACS2 peptide
Descriptor: 5-[(E)-2-(4-bromophenyl)ethenyl]benzene-1,3-diol, ACETYL-COENZYME A SYNTHETASE 2-LIKE, MITOCHONDRIAL, ...
Authors:Nguyen, G.T.T, Gertz, M, Weyand, M, Steegborn, C.
Deposit date:2013-09-19
Release date:2013-11-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Sirt3 Complexes with 4'-Bromo-Resveratrol Reveal Binding Sites and Inhibition Mechanism.
Chem.Biol., 20, 2013
4BVG
DownloadVisualize
BU of 4bvg by Molmil
CRYSTAL STRUCTURE OF HUMAN SIRT3 IN COMPLEX WITH NATIVE ALKYLIMIDATE FORMED FROM ACETYL-LYSINE ACS2-PEPTIDE CRYSTALLIZED IN PRESENCE OF THE INHIBITOR EX-527
Descriptor: (2R,3R,4S,5R)-5-({[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}METHYL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL ACETATE, 1,2-ETHANEDIOL, ACETYL-COENZYME A SYNTHETASE 2-LIKE, ...
Authors:Nguyen, G.T.T, Gertz, M, Weyand, M, Steegborn, C.
Deposit date:2013-06-25
Release date:2013-07-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ex-527 inhibits Sirtuins by exploiting their unique NAD+-dependent deacetylation mechanism.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
4HD8
DownloadVisualize
BU of 4hd8 by Molmil
Crystal structure of human Sirt3 in complex with Fluor-de-Lys peptide and piceatannol
Descriptor: Fluor-de-Lys peptide, ISOPROPYL ALCOHOL, NAD-dependent protein deacetylase sirtuin-3, ...
Authors:Nguyen, G.T.T, Gertz, M, Steegborn, C.
Deposit date:2012-10-02
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A molecular mechanism for direct sirtuin activation by resveratrol.
Plos One, 7, 2012
7B2G
DownloadVisualize
BU of 7b2g by Molmil
Crystal structure of R120Q GDAP1 mutant
Descriptor: GLYCEROL, Ganglioside-induced differentiation-associated protein 1
Authors:Nguyen, G.T.T, Sutinen, A, Kursula, P.
Deposit date:2020-11-26
Release date:2021-12-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Conserved intramolecular networks in GDAP1 are closely connected to CMT-linked mutations and protein stability.
Plos One, 18, 2023
3QBQ
DownloadVisualize
BU of 3qbq by Molmil
Crystal structure of extracellular domains of mouse RANK-RANKL complex
Descriptor: Tumor necrosis factor ligand superfamily member 11, Tumor necrosis factor receptor superfamily member 11A
Authors:Ta, H.M, Nguyen, G.T.T, Jin, H.M, Choi, J.K, Park, H, Kim, N.S, Hwang, H.Y, Kim, K.K.
Deposit date:2011-01-13
Release date:2011-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based development of a receptor activator of nuclear factor-kappaB ligand (RANKL) inhibitor peptide and molecular basis for osteopetrosis
Proc.Natl.Acad.Sci.USA, 107, 2010
4UTN
DownloadVisualize
BU of 4utn by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with succinylated CPS1-peptide
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-21
Release date:2014-08-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
4UU7
DownloadVisualize
BU of 4uu7 by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with 3-methyl- succinylated CPS1-peptide
Descriptor: (2R)-2-methylbutanedioic acid, (2S)-2-methylbutanedioic acid, 1,2-ETHANEDIOL, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-24
Release date:2014-08-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
4UTV
DownloadVisualize
BU of 4utv by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with 3-phenyl- succinylated CPS1-peptide
Descriptor: (2R)-2-phenylbutanedioic acid, (2S)-2-phenylbutanedioic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-23
Release date:2014-08-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
4UTX
DownloadVisualize
BU of 4utx by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with 3-nitro- propionylated CPS1-peptide
Descriptor: 1,2-ETHANEDIOL, 3-NITROPROPANOIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-23
Release date:2014-08-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
4UTR
DownloadVisualize
BU of 4utr by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with glutarylated CPS1-peptide
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, GLUTARIC ACID, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-22
Release date:2014-08-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
4UTZ
DownloadVisualize
BU of 4utz by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with adipoylated CPS1-peptide
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CARBAMOYLPHOSPHATE SYNTHETASE I, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-24
Release date:2014-08-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
4UUA
DownloadVisualize
BU of 4uua by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with 3S-Z-amino- succinylated CPS1-peptide
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CARBAMOYLPHOSPHATE SYNTHETASE I, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-25
Release date:2014-08-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
4UU8
DownloadVisualize
BU of 4uu8 by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with 3,3-dimethyl- succinylated CPS1-peptide
Descriptor: 1,2-ETHANEDIOL, 2,2-dimethylbutanedioic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-24
Release date:2014-08-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
4UUB
DownloadVisualize
BU of 4uub by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with 2R-butyl- succinylated CPS1-peptide
Descriptor: (2R)-2-butylbutanedioic acid, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-25
Release date:2014-08-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
7REH
DownloadVisualize
BU of 7reh by Molmil
Crystal structure of T252E CYP199A4 bound to 4-methoxybenzoic acid
Descriptor: 4-METHOXYBENZOIC ACID, ACETATE ION, CHLORIDE ION, ...
Authors:Podgorski, M.N, Bruning, J.B, Bell, S.G.
Deposit date:2021-07-12
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.545 Å)
Cite:An Altered Heme Environment in an Engineered Cytochrome P450 Enzyme Enables the Switch from Monooxygenase to Peroxygenase Activity
Acs Catalysis, 2022
4HDA
DownloadVisualize
BU of 4hda by Molmil
Crystal structure of human Sirt5 in complex with Fluor-de-Lys peptide and resveratrol
Descriptor: Fluor-de-Lys peptide, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
Authors:Gertz, M, Steegborn, C.
Deposit date:2012-10-02
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:A molecular mechanism for direct sirtuin activation by resveratrol.
Plos One, 7, 2012

 

12>

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon