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7WVF
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BU of 7wvf by Molmil
ectoTLR3-mAb12-poly(I:C) complex
Descriptor: RNA (46-MER), Toll-like receptor 3, mAb12
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-10
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WVJ
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BU of 7wvj by Molmil
NT-mut(K117D,K139D,K145D) TLR3 -poly I:C complex
Descriptor: RNA (46-MER), Toll-like receptor 3
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-10
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WV5
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BU of 7wv5 by Molmil
ectoTLR3-poly(I:C)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, RNA (46-MER), ...
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-09
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WV4
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BU of 7wv4 by Molmil
ectoTLR3-poly(I:C) cluster
Descriptor: RNA (80-MER), Toll-like receptor 3
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-09
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WVE
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BU of 7wve by Molmil
CT-mut (D523K,D524K,E527K) TLR3-poly(I:C) complex
Descriptor: RNA (46-MER), Toll-like receptor 3
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-10
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WV3
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BU of 7wv3 by Molmil
Toll-like receptor3 linear cluster
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, RNA (80-MER), ...
Authors:Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
Deposit date:2022-02-09
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
8EQJ
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BU of 8eqj by Molmil
Structure of SARS-CoV-2 Orf3a in late endosome/lysosome-like membrane environment, MSP1D1 nanodisc
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ORF3a protein
Authors:Miller, A.N, Houlihan, P.R, Matamala, E, Cabezas-Bratesco, D, Lee, G.Y, Cristofori-Armstrong, B, Dilan, T.L, Sanchez-Martinez, S, Matthies, D, Yan, R, Yu, Z, Ren, D, Brauchi, S.E, Clapham, D.E.
Deposit date:2022-10-07
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The SARS-CoV-2 accessory protein Orf3a is not an ion channel, but does interact with trafficking proteins.
Elife, 12, 2023
8EQU
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BU of 8equ by Molmil
Structure of SARS-CoV-2 Orf3a in late endosome/lysosome-like environment, Saposin A nanodisc
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ORF3a protein, Saposin A, ...
Authors:Miller, A.N, Houlihan, P.R, Matamala, E, Cabezas-Bratesco, D, Lee, G.Y, Cristofori-Armstrong, B, Dilan, T.L, Sanchez-Martinez, S, Matthies, D, Yan, R, Yu, Z, Ren, D, Brauchi, S.E, Clapham, D.E.
Deposit date:2022-10-09
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:The SARS-CoV-2 accessory protein Orf3a is not an ion channel, but does interact with trafficking proteins.
Elife, 12, 2023
8EQT
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BU of 8eqt by Molmil
Structure of SARS-CoV-2 Orf3a in plasma membrane-like environment, MSP1D1 nanodisc
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ORF3a protein
Authors:Miller, A.N, Houlihan, P.R, Matamala, E, Cabezas-Bratesco, D, Lee, G.Y, Cristofori-Armstrong, B, Dilan, T.L, Sanchez-Martinez, S, Matthies, D, Yan, R, Yu, Z, Ren, D, Brauchi, S.E, Clapham, D.E.
Deposit date:2022-10-09
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The SARS-CoV-2 accessory protein Orf3a is not an ion channel, but does interact with trafficking proteins.
Elife, 12, 2023
8EQS
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BU of 8eqs by Molmil
Structure of SARS-CoV-1 Orf3a in late endosome/lysosome-like environment, MSP1D1 nanodisc
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Apolipoprotein A-I, ORF3a protein
Authors:Miller, A.N, Houlihan, P.R, Matamala, E, Cabezas-Bratesco, D, Lee, G.Y, Cristofori-Armstrong, B, Dilan, T.L, Sanchez-Martinez, S, Matthies, D, Yan, R, Yu, Z, Ren, D, Brauchi, S.E, Clapham, D.E.
Deposit date:2022-10-09
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The SARS-CoV-2 accessory protein Orf3a is not an ion channel, but does interact with trafficking proteins.
Elife, 12, 2023
6OHJ
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BU of 6ohj by Molmil
Crystal Structure of the Debrominase Bmp8 C82A in Complex with 2,3,4-tribromopyrrole
Descriptor: 2,3,4-tribromo-1H-pyrrole, Debrominase Bmp8, SULFATE ION
Authors:Chekan, J.R, Moore, B.S.
Deposit date:2019-04-05
Release date:2019-05-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Bacterial Tetrabromopyrrole Debrominase Shares a Reductive Dehalogenation Strategy with Human Thyroid Deiodinase.
Biochemistry, 58, 2019
6OHI
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BU of 6ohi by Molmil
Crystal Structure of the Debrominase Bmp8 (Apo)
Descriptor: Debrominase Bmp8, SULFATE ION
Authors:Chekan, J.R, Moore, B.S.
Deposit date:2019-04-05
Release date:2019-05-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Bacterial Tetrabromopyrrole Debrominase Shares a Reductive Dehalogenation Strategy with Human Thyroid Deiodinase.
Biochemistry, 58, 2019
6AT0
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BU of 6at0 by Molmil
Chromodomain HP1 with a p-nitro-L-phenylalanine mutation at position 24 bound to histone H3 peptide containing trimethyl lysine
Descriptor: Heterochromatin protein 1, trimethyl lysine histone H3 tail peptide
Authors:Brustad, E.M, Baril, S.A, Waters, M.L.
Deposit date:2017-08-27
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.285 Å)
Cite:Investigation of Trimethyllysine Binding by the HP1 Chromodomain via Unnatural Amino Acid Mutagenesis.
J. Am. Chem. Soc., 139, 2017
6ASZ
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BU of 6asz by Molmil
Chromodomain HP1 with Y24F mutation bound to histone H3 peptide containing trimethyl lysine
Descriptor: Heterochromatin protein 1, trimethyl lysine histone H3 tail peptide
Authors:Brustad, E.M, Baril, S.A, Waters, M.L.
Deposit date:2017-08-27
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.518 Å)
Cite:Investigation of Trimethyllysine Binding by the HP1 Chromodomain via Unnatural Amino Acid Mutagenesis.
J. Am. Chem. Soc., 139, 2017
6MHA
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BU of 6mha by Molmil
dHP1 Chromodomain Y24W variant bound to histone H3 peptide containing trimethyllysine
Descriptor: Heterochromatin protein 1, histone H3 peptide containing trimethyllysine, H3K9me3
Authors:Brustad, E.M, Krone, M.W, Albanese, K.I, Waters, M.L.
Deposit date:2018-09-17
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:Thermodynamic consequences of Tyr to Trp mutations in the cation-pi-mediated binding of trimethyllysine by the HP1 chromodomain
Chem Sci, 11, 2020

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PDB entries from 2024-05-01

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