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5BOI
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BU of 5boi by Molmil
Bacillus megaterium YpeB C-terminal domain
Descriptor: Germination protein YpeB, SULFATE ION
Authors:Christie, G, Chirgadze, D.Y, Ustok, F.I.
Deposit date:2015-05-27
Release date:2015-08-12
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the PepSY-containing domain of the YpeB protein involved in germination of bacillus spores.
Proteins, 83, 2015
7PCF
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BU of 7pcf by Molmil
Human methemoglobin bound to Staphylococcus aureus hemophore IsdB
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, Iron-regulated surface determinant protein B, ...
Authors:De Bei, O, Gianquinto, E, Chirgadze, D.Y, Hardwick, S.W, Spyrakis, F, Luisi, B.F, Campanini, B.
Deposit date:2021-08-03
Release date:2022-04-13
Method:ELECTRON MICROSCOPY (5.82 Å)
Cite:Cryo-EM structures of staphylococcal IsdB bound to human hemoglobin reveal the process of heme extraction.
Proc.Natl.Acad.Sci.USA, 119, 2022
7PCQ
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BU of 7pcq by Molmil
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:1 complex
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, Iron-regulated surface determinant protein B, ...
Authors:De Bei, O, Gianquinto, E, Chirgadze, D.Y, Hardwick, S.W, Spyrakis, F, Luisi, B.F, Campanini, B.
Deposit date:2021-08-03
Release date:2022-04-13
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Cryo-EM structures of staphylococcal IsdB bound to human hemoglobin reveal the process of heme extraction.
Proc.Natl.Acad.Sci.USA, 119, 2022
7PCH
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BU of 7pch by Molmil
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:2 complex
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, Iron-regulated surface determinant protein B, ...
Authors:De Bei, O, Gianquinto, E, Chirgadze, D.Y, Hardwick, S.W, Spyrakis, F, Luisi, B.F, Campanini, B.
Deposit date:2021-08-03
Release date:2022-04-13
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Cryo-EM structures of staphylococcal IsdB bound to human hemoglobin reveal the process of heme extraction.
Proc.Natl.Acad.Sci.USA, 119, 2022
7QNA
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BU of 7qna by Molmil
Cryo-EM structure of human full-length alpha4beta3gamma2 GABA(A)R in complex with GABA and nanobody Nb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QN6
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BU of 7qn6 by Molmil
Cryo-EM structure of human full-length beta3delta GABA(A)R in complex with nanobody Nb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QN7
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BU of 7qn7 by Molmil
Cryo-EM structure of human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with GABA, histamine and nanobody Nb25
Descriptor: 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QNE
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BU of 7qne by Molmil
Cryo-EM structure of human full-length synaptic alpha1beta3gamma2 GABA(A)R in complex with Ro15-4513 and megabody Mb38
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QN8
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BU of 7qn8 by Molmil
Cryo-EM structure of human full-length beta3delta GABA(A)R in complex with histamine and nanobody Nb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit beta-3, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QN5
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BU of 7qn5 by Molmil
Cryo-EM structure of human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with nanobody Nb25
Descriptor: 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QNB
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BU of 7qnb by Molmil
Cryo-EM structure of human full-length beta3gamma2 GABA(A)R in complex with GABA and nanobody Nb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QNC
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BU of 7qnc by Molmil
Cryo-EM structure of human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with THIP (gaboxadol), histamine and nanobody Nb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4,5,6,7-tetrahydro-[1,2]oxazolo[5,4-c]pyridin-3-one, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QND
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BU of 7qnd by Molmil
Cryo-EM structure of human full-length extrasynaptic beta3delta GABA(A)R in complex with THIP (gaboxadol), histamine and nanobody Nb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4,5,6,7-tetrahydro-[1,2]oxazolo[5,4-c]pyridin-3-one, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QN9
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BU of 7qn9 by Molmil
Cryo-EM structure of human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with GABA, histamine and nanobody Nb25 in a pre-open/closed state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DECANE, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
4QKK
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BU of 4qkk by Molmil
Crystal structure of an oligonucleotide containing 5-formylcytosine
Descriptor: DNA (5'-D(*CP*TP*AP*(5FC)P*GP*(5FC)P*GP*(5FC)P*GP*TP*AP*G)-3')
Authors:Raiber, E.-A, Murat, P, Chirgadze, D.Y, Luisi, B.F, Balasubramanian, S.
Deposit date:2014-06-06
Release date:2014-12-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:5-Formylcytosine alters the structure of the DNA double helix.
Nat.Struct.Mol.Biol., 22, 2015
4RAV
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BU of 4rav by Molmil
Crystal structure of scFvC4 in complex with the first 17 AA of huntingtin
Descriptor: Huntingtin, SULFATE ION, Single-chain Fv, ...
Authors:De Genst, E, Chirgadze, D.Y, Dobson, C.M.
Deposit date:2014-09-11
Release date:2015-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a single-chain fv bound to the 17 N-terminal residues of huntingtin provides insights into pathogenic amyloid formation and suppression.
J.Mol.Biol., 427, 2015
8BEJ
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BU of 8bej by Molmil
GABA-A receptor a5 homomer - a5V3 - APO
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5
Authors:Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
Deposit date:2022-10-21
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHK
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BU of 8bhk by Molmil
GABA-A receptor a5 homomer - a5V3 - Diazepam
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-CHLORO-1-METHYL-5-PHENYL-1,3-DIHYDRO-2H-1,4-BENZODIAZEPIN-2-ONE, Gamma-aminobutyric acid receptor subunit alpha-5
Authors:Miller, P.S, Malinauskas, T.M, Kasaragod, V.B, Chirgadze, D.Y.
Deposit date:2022-10-31
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHI
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BU of 8bhi by Molmil
GABA-A receptor a5 homomer - a5V3 - RO5211223
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, [1,1-bis(oxidanylidene)-1,4-thiazinan-4-yl]-[6-[[5-methyl-3-(6-methylpyridin-3-yl)-1,2-oxazol-4-yl]methoxy]pyridin-3-yl]methanone
Authors:Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
Deposit date:2022-10-31
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHA
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BU of 8bha by Molmil
GABA-A receptor a5 homomer - a5V3 - Basmisanil - HR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Basmisanil, Gamma-aminobutyric acid receptor subunit alpha-5
Authors:Malinauskas, T.M, Wahid, A.A, Hardwick, S.W, Chirgadze, D.Y, Miller, P.S.
Deposit date:2022-10-30
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHS
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BU of 8bhs by Molmil
GABA-A receptor a5 homomer - a5V3 - RO4938581
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[bis(fluoranyl)methyl]-15-bromanyl-2,4,8,9,11-pentazatetracyclo[11.4.0.0^{2,6}.0^{8,12}]heptadeca-1(13),3,5,9,11,14,16-heptaene, Gamma-aminobutyric acid receptor subunit alpha-5
Authors:Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
Deposit date:2022-10-31
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHO
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BU of 8bho by Molmil
GABA-A receptor a5 homomer - a5V3 - L655708
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, ethyl (7~{S})-15-methoxy-12-oxidanylidene-2,4,11-triazatetracyclo[11.4.0.0^{2,6}.0^{7,11}]heptadeca-1(17),3,5,13,15-pentaene-5-carboxylate
Authors:Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
Deposit date:2022-10-31
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHB
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BU of 8bhb by Molmil
GABA-A receptor a5 homomer - a5V3 - RO154513
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, ethyl 8-[(azanylidene-$l^{4}-azanylidene)amino]-5-methyl-6-oxidanylidene-4~{H}-imidazo[1,5-a][1,4]benzodiazepine-3-carboxylate
Authors:Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y, Wahid, A.A.
Deposit date:2022-10-30
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
8BHM
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BU of 8bhm by Molmil
GABA-A receptor a5 homomer - a5V3 - DMCM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, methyl 4-ethyl-6,7-dimethoxy-9H-pyrido[3,4-b]indole-3-carboxylate
Authors:Miller, P.S, Malinauskas, T.M, Hardwick, S.W, Chirgadze, D.Y.
Deposit date:2022-10-31
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors.
Nat.Struct.Mol.Biol., 30, 2023
4S3K
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BU of 4s3k by Molmil
Crystal structure of the Bacillus megaterium QM B1551 spore cortex-lytic enzyme SleL
Descriptor: SULFATE ION, Spore germination protein YaaH
Authors:Christie, G, Chirgadze, D.Y, Ustok, F.I.
Deposit date:2015-02-04
Release date:2015-08-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and functional analysis of SleL, a peptidoglycan lysin involved in germination of Bacillus spores.
Proteins, 83, 2015

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