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Solution structure of the isolated Par-6 PDZ domain
分子名称:	Par-6
著者	Volkman, B.F, Whitney, D.S, Peterson, F.C.
登録日	2011-04-25
公開日	2011-11-30
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	A Conformational Switch in the CRIB-PDZ Module of Par-6. Structure, 19, 2011

2L47

Solution structure of the PlyG catalytic domain
分子名称:	N-acetylmuramoyl-L-alanine amidase, ZINC ION
著者	Volkman, B.F, Dias, J.S, Peterson, F.C.
登録日	2010-10-01
公開日	2011-10-12
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	Tbd To be Published

2L48

Solution structure of the PlyG cell wall binding domain
分子名称:	N-acetylmuramoyl-L-alanine amidase
著者	Volkman, B.F, Dias, J.S, Peterson, F.C.
登録日	2010-10-01
公開日	2011-10-12
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	Tbd To be Published

2L3J

The solution structure of the ADAR2 dsRBM-RNA complex reveals a sequence-specific read out of the minor groove
分子名称:	Double-stranded RNA-specific editase 1, RNA (71-MER)
著者	Stefl, R, Oberstrass, F.C, Allain, F.H.-T.
登録日	2010-09-14
公開日	2010-10-27
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove. Cell(Cambridge,Mass.), 143, 2010

2L8R

Solution structure of human protein C6orf130 in complex with ADP-ribose
分子名称:	ADENOSINE-5-DIPHOSPHORIBOSE, Uncharacterized protein C6orf130
著者	Lytle, B.L, Peterson, F.C, Volkman, B.F, Center for Eukaryotic Structural Genomics (CESG)
登録日	2011-01-22
公開日	2011-02-23
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	Orphan Macrodomain Protein (Human C6orf130) Is an O-Acyl-ADP-ribose Deacylase: SOLUTION STRUCTURE AND CATALYTIC PROPERTIES. J.Biol.Chem., 286, 2011

2LC6

Solution structure of Par-6 Q144C/L164C
分子名称:	Par-6
著者	Volkman, B.F, Whitney, D.S, Peterson, F.C.
登録日	2011-04-25
公開日	2011-11-30
最終更新日	2023-06-14
実験手法	SOLUTION NMR
主引用文献	A Conformational Switch in the CRIB-PDZ Module of Par-6. Structure, 19, 2011

2LGR

Solution structure of human protein C6orf130, a putative macro domain
分子名称:	Uncharacterized protein C6orf130
著者	Volkman, B.F, Lytle, B.L, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
登録日	2011-08-01
公開日	2011-08-17
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Orphan Macrodomain Protein (Human C6orf130) Is an O-Acyl-ADP-ribose Deacylase: SOLUTION STRUCTURE AND CATALYTIC PROPERTIES. J.Biol.Chem., 286, 2011

2L4N

Solution Structure of the Chemokine CCL21
分子名称:	C-C motif chemokine 21
著者	Veldkamp, C.T, Peterson, F.C, Love, M, Sandberg, J.L.
登録日	2010-10-10
公開日	2011-11-02
最終更新日	2023-06-14
実験手法	SOLUTION NMR
主引用文献	Solution structure of CCL21 and identification of a putative CCR7 binding site. Biochemistry, 51, 2012

2LQ7

E2 binding surface on Uba3 beta-grasp domain undergoes a conformational transition
分子名称:	NEDD8-activating enzyme E1 catalytic subunit
著者	Elgin, E.S, Peterson, F.C, Volkman, B.F.
登録日	2012-02-27
公開日	2012-07-25
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	E2-binding surface on Uba3 beta-grasp domain undergoes a conformational transition. Proteins, 80, 2012

2LVX

MRH domain of the Glucosidase II beta subunit from S. pombe
分子名称:	Glucosidase 2 subunit beta
著者	Dahms, N.M, Olson, L.J, Peterson, F.C.
登録日	2012-07-12
公開日	2013-05-01
最終更新日	2023-06-14
実験手法	SOLUTION NMR
主引用文献	Structure of the Lectin Mannose 6-Phosphate Receptor Homology (MRH) Domain of Glucosidase II, an Enzyme That Regulates Glycoprotein Folding Quality Control in the Endoplasmic Reticulum. J.Biol.Chem., 288, 2013

2MBF

Solution structure of the forkhead domain of Brugia malayi DAF-16a
分子名称:	Fork head domain containing protein
著者	Veldkamp, C.T, Peterson, F.C, Casper, S.K, Schoeller, S.J.
登録日	2013-07-30
公開日	2013-09-11
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	The solution structure of the forkhead box-O DNA binding domain of Brugia malayi DAF-16a. Proteins, 82, 2014

2MG4

Computational design and experimental verification of a symmetric protein homodimer
分子名称:	Computational designed homodimer
著者	Mou, Y, Huang, P.S, Hsu, F.C, Huang, S.J, Mayo, S.L.
登録日	2013-10-26
公開日	2015-04-08
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Computational design and experimental verification of a symmetric protein homodimer. Proc.Natl.Acad.Sci.USA, 112, 2015

2LWX

Solution structure of the C-terminal Pdr1-activating domain of the J-protein Zuo1
分子名称:	Zuotin
著者	Volkman, B.F, Ducett, J.K, Peterson, F.C, Craig, E.A.
登録日	2012-08-08
公開日	2012-10-03
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Unfolding of the C-terminal domain of the j-protein zuo1 releases autoinhibition and activates pdr1-dependent transcription. J.Mol.Biol., 425, 2013

2MP1

Solution structure of the human chemokine CCL19
分子名称:	C-C motif chemokine 19
著者	Veldkamp, C.T, Peterson, F.C, Gabel-Eissens, S.J, Gillitzer, M.L.
登録日	2014-05-09
公開日	2015-06-10
最終更新日	2023-06-14
実験手法	SOLUTION NMR
主引用文献	Solution Structure of CCL19 and Identification of Overlapping CCR7 and PSGL-1 Binding Sites. Biochemistry, 54, 2015

2N55

Structure of constitutively monomeric CXCL12 in complex with the CXCR4 N-terminus
分子名称:	C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
著者	Ziarek, J.J, Peterson, F.C, Volkman, B.F.
登録日	2015-07-07
公開日	2016-04-27
最終更新日	2023-06-14
実験手法	SOLUTION NMR
主引用文献	Structural basis for chemokine recognition by a G protein-coupled receptor and implications for receptor activation. Sci Signal, 10, 2017

2N1H

Solution structure of the GBII-beta MRH domain W409A point mutant
分子名称:	Glucosidase 2 subunit beta
著者	Olson, L.J, Peterson, F.C, Damhs, N.M.
登録日	2015-04-01
公開日	2015-12-09
最終更新日	2023-06-14
実験手法	SOLUTION NMR
主引用文献	Crystal structure and functional analyses of glucosdidase II's lectin domain: Insgihts into oligomannose recognition. To be Published

2OJ7

NMR structure of the UGUU tetraloop of Duck Epsilon apical stem loop
分子名称:	5'-R(PGPCPUPGPUPUPGPU)-3'
著者	Girard, F.C, Ottink, O.M, Ampt, K.A.M, Tessari, M, Wijmenga, S.S.
登録日	2007-01-12
公開日	2007-05-22
最終更新日	2023-12-27
実験手法	SOLUTION NMR
主引用文献	Thermodynamics and NMR studies on Duck, Heron and Human HBV encapsidation signals. Nucleic Acids Res., 35, 2007

6S8V

Structure of the high affinity Anticalin P3D11 in complex with the human CD98 heavy chain ectodomain
分子名称:	1,2-ETHANEDIOL, 4F2 cell-surface antigen heavy chain, Neutrophil gelatinase-associated lipocalin
著者	Schiefner, A, Deuschle, F.-C, Skerra, A.
登録日	2019-07-10
公開日	2020-03-04
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Development of a high affinity Anticalin®directed against human CD98hc for theranostic applications. Theranostics, 10, 2020

8G46

Cryo-EM structure of DDB1deltaB-DDA1-DCAF16-BRD4(BD2)-MMH2
分子名称:	Bromodomain-containing protein 4, DDB1- and CUL4-associated factor 16, DET1- and DDB1-associated protein 1, ...
著者	Ma, M.W, Hunkeler, M, Jin, C.Y, Fischer, E.S.
登録日	2023-02-08
公開日	2023-03-08
実験手法	ELECTRON MICROSCOPY (2.2 Å)
主引用文献	Template-assisted covalent modification of DCAF16 underlies activity of BRD4 molecular glue degraders. Biorxiv, 2023

1FY1

[R23S,F25E]HBP, A MUTANT OF HUMAN HEPARIN BINDING PROTEIN (CAP37)
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ETHANOL, ...
著者	Kastrup, J.S, Linde, V, Pedersen, A.K, Stoffer, B, Iversen, L.F, Larsen, I.K, Rasmussen, P.B, Flodgaard, H.J, Bjorn, S.E.
登録日	2000-09-28
公開日	2001-09-28
最終更新日	2021-11-03
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Two mutants of human heparin binding protein (CAP37): toward the understanding of the nature of lipid A/LPS and BPTI binding. Proteins, 42, 2001

1FY3

[G175Q]HBP, A mutant of human heparin binding protein (CAP37)
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者	Kastrup, J.S, Linde, V, Pedersen, A.K, Stoffer, B, Iversen, L.F, Larsen, I.K, Rasmussen, P.B, Flodgaard, H.J, Bjorn, S.E.
登録日	2000-09-28
公開日	2001-09-28
最終更新日	2021-11-03
実験手法	X-RAY DIFFRACTION (1.89 Å)
主引用文献	Two mutants of human heparin binding protein (CAP37): toward the understanding of the nature of lipid A/LPS and BPTI binding. Proteins, 42, 2001

2YFE

Ligand binding domain of human PPAR gamma in complex with amorfrutin 1
分子名称:	Amorfrutin 1, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
著者	de Groot, J.C, Buessow, K.
登録日	2011-04-05
公開日	2012-04-11
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Amorfrutins are Potent Antidiabetic Dietary Natural Products Proc.Natl.Acad.Sci.USA, 109, 2012

2YPI

CRYSTALLOGRAPHIC ANALYSIS OF THE COMPLEX BETWEEN TRIOSEPHOSPHATE ISOMERASE AND 2-PHOSPHOGLYCOLATE AT 2.5-ANGSTROMS RESOLUTION. IMPLICATIONS FOR CATALYSIS
分子名称:	2-PHOSPHOGLYCOLIC ACID, TRIOSEPHOSPHATE ISOMERASE
著者	Lolis, E, Petsko, G.A.
登録日	1990-01-12
公開日	1991-01-15
最終更新日	2024-02-21
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Crystallographic analysis of the complex between triosephosphate isomerase and 2-phosphoglycolate at 2.5-A resolution: implications for catalysis. Biochemistry, 29, 1990

6BYG

Crystal structure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri
分子名称:	Beta-mannosidase, beta-D-mannopyranose
著者	Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T.
登録日	2017-12-20
公開日	2018-07-18
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (1.999 Å)
主引用文献	Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem., 293, 2018

4U0V

Crystal structure of YvoA from Bacillus subtilis in complex with glucosamine-6-phosphate
分子名称:	1,2-ETHANEDIOL, 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, HTH-type transcriptional repressor YvoA
著者	Fillenberg, S.B, Muller, Y.A.
登録日	2014-07-14
公開日	2015-01-14
最終更新日	2023-12-20
実験手法	X-RAY DIFFRACTION (2.051 Å)
主引用文献	Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR. Nucleic Acids Res., 43, 2015

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