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7E88
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BU of 7e88 by Molmil
Crystal structure of the SARS-CoV-2 S RBD in complex with BD-515 Fab
Descriptor: BD-515 Fab Heavy Chain, BD-515 Fab Light Chain, Spike protein S1
Authors:Gao, C, Wei, Y, Xiao, J.
Deposit date:2021-03-01
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Humoral immune response to circulating SARS-CoV-2 variants elicited by inactivated and RBD-subunit vaccines.
Cell Res., 31, 2021
7E8C
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BU of 7e8c by Molmil
SARS-CoV-2 S-6P in complex with 9 Fabs
Descriptor: 368-2 H, 368-2 L, 604 H, ...
Authors:Du, S, Xiao, J, Zhang, Z.
Deposit date:2021-03-01
Release date:2021-06-09
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Humoral immune response to circulating SARS-CoV-2 variants elicited by inactivated and RBD-subunit vaccines.
Cell Res., 31, 2021
7WGC
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BU of 7wgc by Molmil
Neutral Omicron Spike Trimer in complex with ACE2.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WG7
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BU of 7wg7 by Molmil
Acidic Omicron Spike Trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7E8F
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BU of 7e8f by Molmil
SARS-CoV-2 NTD in complex with N9 Fab
Descriptor: 368-2 H, 368-2 L, 604 H, ...
Authors:Du, S, Xiao, J, Zhang, Z.
Deposit date:2021-03-01
Release date:2021-06-09
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Humoral immune response to circulating SARS-CoV-2 variants elicited by inactivated and RBD-subunit vaccines.
Cell Res., 31, 2021
7E86
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BU of 7e86 by Molmil
Crystal structure of the SARS-CoV-2 S RBD in complex with BD-508 Fab
Descriptor: BD-508 Fab Heavy Chain, BD-508 Fab Light Chain, Spike protein S1
Authors:Gao, C, Xiao, J.
Deposit date:2021-03-01
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Humoral immune response to circulating SARS-CoV-2 variants elicited by inactivated and RBD-subunit vaccines.
Cell Res., 31, 2021
7WG9
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BU of 7wg9 by Molmil
Delta Spike Trimer(1 RBD Up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WGB
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BU of 7wgb by Molmil
Neutral Omicron Spike Trimer in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
4RR5
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BU of 4rr5 by Molmil
The crystal structure of Synechocystis sp. PCC 6803 Malonyl-CoA: ACP Transacylase
Descriptor: ACETATE ION, Malonyl CoA-acyl carrier protein transacylase
Authors:Liu, Y.
Deposit date:2014-11-06
Release date:2015-07-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.427 Å)
Cite:Structural and biochemical characterization of MCAT from photosynthetic microorganism Synechocystis sp. PCC 6803 reveal its stepwise catalytic mechanism
Biochem.Biophys.Res.Commun., 457, 2015
8W22
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BU of 8w22 by Molmil
Umb1 umbrella toxin particle (local refinement of UmbB1 bound ALF of UmbC1 and UmbA1)
Descriptor: Intein C-terminal splicing domain-containing protein, Secreted esterase, Secreted protein
Authors:Park, Y.J, Zhao, Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F, Mougous, J.D, Veesler, D.
Deposit date:2024-02-19
Release date:2024-04-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Streptomyces umbrella toxin particles block hyphal growth of competing species.
Nature, 629, 2024
5KPU
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BU of 5kpu by Molmil
Crystal structure of TEM1 beta-lactamase mutant I263L in the presence of 1.2 MPa xenon
Descriptor: Beta-lactamase TEM, XENON
Authors:Roose, B.W, Dmochowski, I.J.
Deposit date:2016-07-05
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Structural Basis for129Xe Hyper-CEST Signal in TEM-1 beta-Lactamase.
Chemphyschem, 2018
7YHK
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BU of 7yhk by Molmil
Cryo-EM structure of the HA trimer of A/Beijing/262/1995(H1N1) in complex with neutralizing antibody 12H5
Descriptor: 12H5 heavy chain, 12H5 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zheng, Q, Li, S, Li, T, Xue, W, Sun, H.
Deposit date:2022-07-13
Release date:2022-08-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Identification of a cross-neutralizing antibody that targets the receptor binding site of H1N1 and H5N1 influenza viruses.
Nat Commun, 13, 2022
7XUX
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BU of 7xux by Molmil
Crystal structure of a FIC domain containnig protein
Descriptor: Fido domain-containing protein
Authors:Zhen, X, Ouyang, S.
Deposit date:2022-05-20
Release date:2022-12-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:A secreted effector with a dual role as a toxin and as a transcriptional factor.
Nat Commun, 13, 2022
7N61
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BU of 7n61 by Molmil
structure of C2 projections and MIPs
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FAP147, FAP178, ...
Authors:Han, L, Zhang, K.
Deposit date:2021-06-07
Release date:2022-05-18
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of an active central apparatus.
Nat.Struct.Mol.Biol., 29, 2022
7N6G
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BU of 7n6g by Molmil
C1 of central pair
Descriptor: CPC1, Calmodulin, DPY30, ...
Authors:Han, L, Zhang, K.
Deposit date:2021-06-08
Release date:2022-05-18
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of an active central apparatus.
Nat.Struct.Mol.Biol., 29, 2022
5XHS
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BU of 5xhs by Molmil
Crystal structure of SIRT5 complexed with a fluorogenic small-molecule substrate SuBKA
Descriptor: (2S)-2-azanyl-6-[(4-hydroxy-4-oxo-butanoyl)amino]hexanoic acid, 7-AMINO-4-METHYL-CHROMEN-2-ONE, NAD-dependent protein deacylase sirtuin-5, ...
Authors:Yu, Y, Li, B, Chen, Q.
Deposit date:2017-04-24
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Interactions between sirtuins and fluorogenic small-molecule substrates offer insights into inhibitor design
Rsc Adv, 7, 2017
2KLK
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BU of 2klk by Molmil
Solution structure of GB1 A34F mutant with RDC and SAXS
Descriptor: IMMUNOGLOBULIN G-BINDING PROTEIN G
Authors:Wang, J, Zuo, X, Yu, P, Byeon, I.L, Jung, J, Schwieters, C.D, Gronenborn, A.M, Wang, Y.
Deposit date:2009-07-06
Release date:2009-10-06
Last modified:2024-05-22
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Determination of multicomponent protein structures in solution using global orientation and shape restraints.
J.Am.Chem.Soc., 131, 2009
8WM4
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BU of 8wm4 by Molmil
Cryo-EM structure of DiCas7-11 in complex with crRNA
Descriptor: CRISPR-associated RAMP family protein, ZINC ION, crRNA (38-MER)
Authors:Ma, H.Y, Tang, X.D.
Deposit date:2023-10-02
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structural basis of negative regulation of CRISPR-Cas7-11 by TPR-CHAT.
Signal Transduct Target Ther, 9, 2024
8WML
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BU of 8wml by Molmil
Cryo-EM structure of Cas7-11-crRNA bound to N-terminal of TPR-CHAT
Descriptor: CHAT domain-containing protein, CRISPR-associated RAMP family protein, ZINC ION, ...
Authors:Ma, H.Y, Tang, X.D.
Deposit date:2023-10-03
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structural basis of negative regulation of CRISPR-Cas7-11 by TPR-CHAT.
Signal Transduct Target Ther, 9, 2024
8WMC
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BU of 8wmc by Molmil
Cryo-EM structure of DiCas7-11-crRNA in complex with regulator
Descriptor: CHAT domain-containing protein, CRISPR-associated RAMP family protein, RNA (38-MER), ...
Authors:Ma, H.Y, Tang, X.D.
Deposit date:2023-10-03
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of negative regulation of CRISPR-Cas7-11 by TPR-CHAT.
Signal Transduct Target Ther, 9, 2024
8WMI
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BU of 8wmi by Molmil
Cryo-EM structure of DiCas7-11 mutant in complex with crRNA
Descriptor: CRISPR-associated RAMP family protein, ZINC ION, crRNA (39-MER)
Authors:Ma, H.Y, Tang, X.D.
Deposit date:2023-10-03
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural basis of negative regulation of CRISPR-Cas7-11 by TPR-CHAT.
Signal Transduct Target Ther, 9, 2024
5EOF
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BU of 5eof by Molmil
Crystal structure of OPTN NTD and TBK1 CTD complex
Descriptor: Optineurin, Serine/threonine-protein kinase TBK1
Authors:Li, F, Xie, X, Liu, J, Pan, L.
Deposit date:2015-11-10
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural insights into the interaction and disease mechanism of neurodegenerative disease-associated optineurin and TBK1 proteins.
Nat Commun, 7, 2016
5EP6
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BU of 5ep6 by Molmil
The crystal structure of NAP1 in complex with TBK1
Descriptor: 5-azacytidine-induced protein 2, GLYCEROL, Serine/threonine-protein kinase TBK1
Authors:Li, F, Xie, X, Liu, J, Pan, L.
Deposit date:2015-11-11
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Structural insights into the interaction and disease mechanism of neurodegenerative disease-associated optineurin and TBK1 proteins.
Nat Commun, 7, 2016
6UBI
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BU of 6ubi by Molmil
N123-VRC34.05 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519
Descriptor: HIV fusion peptide 512-519, VRC34.05 heavy chain, VRC34.05 light chain
Authors:Xu, K, Liu, K, Kwong, P.D.
Deposit date:2019-09-11
Release date:2020-03-18
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage.
Cell Host Microbe, 27, 2020
7WHZ
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BU of 7whz by Molmil
SARS-CoV-2 spike protein in complex with three human neutralizing antibodies
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IG c1437_light_IGLV1-40_IGLJ1, IG c934_light_IGKV1-5_IGKJ1, ...
Authors:Zheng, Q, Li, S, Sun, H, Zheng, Z, Wang, S.
Deposit date:2022-01-01
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Three SARS-CoV-2 antibodies provide broad and synergistic neutralization against variants of concern, including Omicron.
Cell Rep, 39, 2022

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PDB entries from 2024-10-16

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