Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7WPH
DownloadVisualize
BU of 7wph by Molmil
SARS-CoV2 RBD bound to Fab06
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FAB06 light chain, Fab06 heavy chain, ...
Authors:Lin, J.Q, El Sahili, A, Lescar, J.
Deposit date:2022-01-23
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Engineering SARS-CoV-2 specific cocktail antibodies into a bispecific format improves neutralizing potency and breadth.
Nat Commun, 13, 2022
7WPV
DownloadVisualize
BU of 7wpv by Molmil
Fab14 - a SARS-CoV2 RBD neutralising antibody
Descriptor: Fab14 heavy chain, Fab14 light chain
Authors:Lin, J.Q, El Sahili, A, Lescar, J.
Deposit date:2022-01-24
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Engineering SARS-CoV-2 specific cocktail antibodies into a bispecific format improves neutralizing potency and breadth.
Nat Commun, 13, 2022
6BHI
DownloadVisualize
BU of 6bhi by Molmil
Crystal structure of SETDB1 with a modified H3 peptide
Descriptor: Histone H3.1, Histone-lysine N-methyltransferase SETDB1, UNKNOWN ATOM OR ION
Authors:Qin, S, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-10-30
Release date:2017-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1.
Nat Commun, 8, 2017
6BHD
DownloadVisualize
BU of 6bhd by Molmil
Crystal structure of SETDB1 with a modified H3 peptide
Descriptor: Histone H3.1, Histone-lysine N-methyltransferase SETDB1, SODIUM ION, ...
Authors:Qin, S, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-10-30
Release date:2017-12-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1.
Nat Commun, 8, 2017
6BHH
DownloadVisualize
BU of 6bhh by Molmil
Crystal structure of SETDB1 with a modified H3 peptide
Descriptor: Histone H3.1, Histone-lysine N-methyltransferase SETDB1, SULFATE ION, ...
Authors:Qin, S, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-10-30
Release date:2017-11-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1.
Nat Commun, 8, 2017
6BHE
DownloadVisualize
BU of 6bhe by Molmil
Crystal structure of SETDB1 with a modified H3 peptide
Descriptor: Histone H3.1, Histone-lysine N-methyltransferase SETDB1, UNKNOWN ATOM OR ION
Authors:Qin, S, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-10-30
Release date:2017-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1.
Nat Commun, 8, 2017
7WJM
DownloadVisualize
BU of 7wjm by Molmil
CryoEM structure of chitin synthase 1 from Phytophthora sojae
Descriptor: Chitin synthase
Authors:Chen, W, Cao, P, Gong, Y, Yang, Q.
Deposit date:2022-01-07
Release date:2022-09-28
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for directional chitin biosynthesis.
Nature, 610, 2022
7WJN
DownloadVisualize
BU of 7wjn by Molmil
CryoEM structure of chitin synthase 1 mutant E495A from Phytophthora sojae complexed with UDP-GlcNAc
Descriptor: Chitin synthase, MANGANESE (II) ION, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Chen, W, Cao, P, Gong, Y, Yang, Q.
Deposit date:2022-01-07
Release date:2022-09-28
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for directional chitin biosynthesis.
Nature, 610, 2022
7WJO
DownloadVisualize
BU of 7wjo by Molmil
CryoEM structure of chitin synthase 1 from Phytophthora sojae complexed with nikkomycin Z
Descriptor: (2S)-{[(2S,3S,4S)-2-amino-4-hydroxy-4-(5-hydroxypyridin-2-yl)-3-methylbutanoyl]amino}[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]acetic acid (non-preferred name), Chitin synthase
Authors:Chen, W, Cao, P, Gong, Y, Yang, Q.
Deposit date:2022-01-07
Release date:2022-09-28
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for directional chitin biosynthesis.
Nature, 610, 2022
7EN6
DownloadVisualize
BU of 7en6 by Molmil
The crystal structure of Escherichia coli MurR in apo form
Descriptor: HTH-type transcriptional regulator MurR, PHOSPHATE ION
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.276 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
7EN5
DownloadVisualize
BU of 7en5 by Molmil
The crystal structure of Escherichia coli MurR in complex with N-acetylglucosamine-6-phosphate
Descriptor: 2-METHOXYETHANOL, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, GLYCEROL, ...
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
7EN7
DownloadVisualize
BU of 7en7 by Molmil
The crystal structure of Escherichia coli MurR in complex with N-acetylmuramic-acid-6-phosphate
Descriptor: (2R)-2-[(2R,3R,4R,5S,6R)-3-acetamido-2,5-bis(oxidanyl)-6-(phosphonooxymethyl)oxan-4-yl]oxypropanoic acid, HTH-type transcriptional regulator MurR
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
7BU9
DownloadVisualize
BU of 7bu9 by Molmil
Crystal Structure of Spindlin1-H3(K4me3-K9me2) complex
Descriptor: H3(K4me3-K9me2) peptide, Spindlin-1
Authors:Zhao, F, Li, H.
Deposit date:2020-04-05
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.502 Å)
Cite:Molecular basis for histone H3 "K4me3-K9me3/2" methylation pattern readout by Spindlin1.
J.Biol.Chem., 295, 2020
7BQZ
DownloadVisualize
BU of 7bqz by Molmil
Crystal Structure of Spindlin1 bound to H3(K4me3-K9me3) peptide
Descriptor: H3(K4me3-K9me3) peptide, Spindlin-1
Authors:Zhao, F, Li, H.
Deposit date:2020-03-26
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Molecular basis for histone H3 "K4me3-K9me3/2" methylation pattern readout by Spindlin1.
J.Biol.Chem., 295, 2020
7BTD
DownloadVisualize
BU of 7btd by Molmil
Crystal structure of Rheb Y35N mutant bound to GppNHp
Descriptor: GTP-binding protein Rheb, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Zhang, C, Zhang, T, Ding, J.
Deposit date:2020-04-01
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for the functions of dominantly active Y35N and inactive D60K Rheb mutants in mTORC1 signaling.
J Mol Cell Biol, 12, 2020
7CPC
DownloadVisualize
BU of 7cpc by Molmil
His-Mediated Reversible Self-assembly of Ferritin Nanocage with Ni binding
Descriptor: FE (III) ION, Ferritin, NICKEL (II) ION
Authors:Gu, C, Zhang, T, Zhao, G.
Deposit date:2020-08-06
Release date:2021-06-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:His-Mediated Reversible Self-Assembly of Ferritin Nanocages through Two Different Switches for Encapsulation of Cargo Molecules.
Acs Nano, 2020
7CPI
DownloadVisualize
BU of 7cpi by Molmil
His-Mediated Reversible Self-assembly of Ferritin Nanocage with Zn binding
Descriptor: FE (III) ION, Ferritin, ZINC ION
Authors:Gu, C, Zhang, T, Zhao, G.
Deposit date:2020-08-07
Release date:2021-06-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:His-Mediated Reversible Self-Assembly of Ferritin Nanocages through Two Different Switches for Encapsulation of Cargo Molecules.
Acs Nano, 2020
7DCN
DownloadVisualize
BU of 7dcn by Molmil
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
Descriptor: Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase, SULFATE ION, ZINC ION
Authors:Xu, H, Wang, B, Su, X.D.
Deposit date:2020-10-26
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Co-evolution-based prediction of metal-binding sites in proteomes by machine learning.
Nat.Chem.Biol., 19, 2023
7DCM
DownloadVisualize
BU of 7dcm by Molmil
Crystal structure of CITX
Descriptor: Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase, ZINC ION
Authors:Xu, H, Wang, B, Su, X.D.
Deposit date:2020-10-26
Release date:2021-11-03
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Co-evolution-based prediction of metal-binding sites in proteomes by machine learning.
Nat.Chem.Biol., 19, 2023
7DNR
DownloadVisualize
BU of 7dnr by Molmil
Crystal Structure of Zn-bound SIS Domain of Glucosamine-6-P Synthase from E. coli
Descriptor: Glutamine--fructose-6-phosphate aminotransferase [isomerizing], ZINC ION
Authors:Gao, C, Xiao, J.
Deposit date:2020-12-10
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of Metal-binding Proteins by Thermal Proteome Profiling
To Be Published
7E5C
DownloadVisualize
BU of 7e5c by Molmil
Bacterial prolidase mutant D45W/L225Y/H226L/H343I
Descriptor: MANGANESE (II) ION, Xaa-Pro dipeptidase
Authors:Yang, J.
Deposit date:2021-02-18
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure-based redesign of the bacterial prolidase active-site pocket for efficient enhancement of methyl-parathion hydrolysis
Catalysis Science And Technology, 11, 2021
7DWB
DownloadVisualize
BU of 7dwb by Molmil
Human Pannexin1 model
Descriptor: Pannexin-1
Authors:Zhang, S.S, Yang, M.J.
Deposit date:2021-01-17
Release date:2021-05-26
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structure of the full-length human Pannexin1 channel and insights into its role in pyroptosis.
Cell Discov, 7, 2021
7DX4
DownloadVisualize
BU of 7dx4 by Molmil
The structure of FC08 Fab-hA.CE2-RBD complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Heavy chain of FC08 Fab, ...
Authors:Cao, L, Wang, X.
Deposit date:2021-01-18
Release date:2021-04-21
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A proof of concept for neutralizing antibody-guided vaccine design against SARS-CoV-2.
Natl Sci Rev, 8, 2021
7D4G
DownloadVisualize
BU of 7d4g by Molmil
A proof of concept for neutralizing antibody-guided vaccine design against SARS-CoV-2
Descriptor: Heavy chain of FC05 Fab, Light chain of FC05 Fab, Spike glycoprotein S1
Authors:Cao, L, Wang, X.
Deposit date:2020-09-23
Release date:2021-04-07
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:A proof of concept for neutralizing antibody-guided vaccine design against SARS-CoV-2.
Natl Sci Rev, 8, 2021
7BTA
DownloadVisualize
BU of 7bta by Molmil
Crystal structure of Rheb D60K mutant bound to GDP
Descriptor: GTP-binding protein Rheb, GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION
Authors:Zhang, C, Zhang, T, Ding, J.
Deposit date:2020-03-31
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis for the functions of dominantly active Y35N and inactive D60K Rheb mutants in mTORC1 signaling.
J Mol Cell Biol, 12, 2020

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon