Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8RK7
DownloadVisualize
BU of 8rk7 by Molmil
Baseplate of bacteriophage JBD30 computed in C3 symmetry
Descriptor: DUF2163 domain-containing protein, FE (III) ION, Tip attachment protein J domain-containing protein, ...
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.46 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
8RK3
DownloadVisualize
BU of 8rk3 by Molmil
Bacteriophage JBD30 baseplate - composite structure
Descriptor: DUF2163 domain-containing protein, DUF2793 domain-containing protein, Tape measure protein N-terminal domain-containing protein, ...
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.46 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
8RQE
DownloadVisualize
BU of 8rqe by Molmil
Composite map of bacteriophage JBD30 capsid - neck complex
Descriptor: Bacteriophage Mu GpT domain-containing protein, DUF1320 domain-containing protein, Mu-like prophage FluMu N-terminal domain-containing protein, ...
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2024-01-18
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
7UKL
DownloadVisualize
BU of 7ukl by Molmil
Cryo-EM structure of Antibody 12-16 in complex with prefusion SARS-CoV-2 Spike glycoprotein
Descriptor: 12-16 Fab Heavy Chain, 12-16 Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Casner, R.G, Shapiro, L.
Deposit date:2022-04-01
Release date:2023-10-04
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Antibodies targeting a quaternary site on SARS-CoV-2 spike glycoprotein prevent viral receptor engagement by conformational locking.
Immunity, 56, 2023
8RK5
DownloadVisualize
BU of 8rk5 by Molmil
Tail fibres of bacteriophage JBD30
Descriptor: Virion structural protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.54 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
8RKB
DownloadVisualize
BU of 8rkb by Molmil
Connector complex of bacteriophage JBD30 computed in C12 symmetry
Descriptor: DUF1320 domain-containing protein, Portal protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
8RK6
DownloadVisualize
BU of 8rk6 by Molmil
Baseplate core of bacteriophage JBD30 computed in C3 symmetry
Descriptor: DUF2163 domain-containing protein, FE (III) ION, Tip attachment protein J domain-containing protein, ...
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
8RKX
DownloadVisualize
BU of 8rkx by Molmil
Procapsid of bacteriophage JBD30 computed in I4 symmetry
Descriptor: Bacteriophage Mu GpT domain-containing protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-30
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.01 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
8RK4
DownloadVisualize
BU of 8rk4 by Molmil
Receptor binding protein of bacteriophage JBD30 computed with C3 symmetry
Descriptor: DUF2793 domain-containing protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.74 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
1DLY
DownloadVisualize
BU of 1dly by Molmil
X-RAY CRYSTAL STRUCTURE OF HEMOGLOBIN FROM THE GREEN UNICELLULAR ALGA CHLAMYDOMONAS EUGAMETOS
Descriptor: 1,2-ETHANEDIOL, CYANIDE ION, HEMOGLOBIN, ...
Authors:Pesce, A, Couture, M, Guertin, M, Dewilde, S, Moens, L, Bolognesi, M.
Deposit date:1999-12-13
Release date:2000-09-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel two-over-two alpha-helical sandwich fold is characteristic of the truncated hemoglobin family.
EMBO J., 19, 2000
8RKC
DownloadVisualize
BU of 8rkc by Molmil
Capsid of bacteriophage JBD30 decorated with minor capsid protein trimers computed in I4 symmetry
Descriptor: Bacteriophage Mu GpT domain-containing protein, Mu-like prophage FluMu N-terminal domain-containing protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2023-12-23
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure and replication of Pseudomonas aeruginosa phage JBD30
Embo J., 2024
8SJ3
DownloadVisualize
BU of 8sj3 by Molmil
Beta-lactamase CTX-M-14 E166Y/N170G
Descriptor: Beta-lactamase CTX-M-14
Authors:Judge, A, Palzkill, T, Sankaran, B, Prasad, B.V.V, Hu, L.
Deposit date:2023-04-17
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of CTX-M-14 E166Y/N170G at 1.5 Angstroms resolution
To Be Published
8STL
DownloadVisualize
BU of 8stl by Molmil
Crystal Structure of Nanobody PIK3_Nb16 against wild-type PI3Kalpha
Descriptor: Nanobody PIK3_Nb16, SULFATE ION
Authors:Nwafor, J.N, Srinivasan, L, Chen, Z, Gabelli, S.B, Iheanacho, A, Alzogaray, V, Klinke, S.
Deposit date:2023-05-10
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Development of isoform specific nanobodies for Class I PI3Ks
To be published
8SLE
DownloadVisualize
BU of 8sle by Molmil
Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-3
Descriptor: Transient receptor potential cation channel subfamily M member 5
Authors:Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
Deposit date:2023-04-21
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SLI
DownloadVisualize
BU of 8sli by Molmil
Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-1
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 5
Authors:Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
Deposit date:2023-04-21
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
2I04
DownloadVisualize
BU of 2i04 by Molmil
X-ray crystal structure of MAGI-1 PDZ1 bound to the C-terminal peptide of HPV18 E6
Descriptor: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1, SULFATE ION, ...
Authors:Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M.
Deposit date:2006-08-09
Release date:2007-02-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein.
J.Virol., 81, 2007
1DA2
DownloadVisualize
BU of 1da2 by Molmil
MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO4CG): N4-METHOXYCYTOSINE/GUANINE BASE-PAIRS IN Z-DNA
Descriptor: DNA (5'-D(*CP*GP*CP*GP*(C45)P*G)-3')
Authors:Van Meervelt, L, Moore, M.H, Lin, P.K.T, Brown, D.M, Kennard, O.
Deposit date:1992-10-17
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular and crystal structure of d(CGCGmo4CG): N4-methoxycytosine.guanine base-pairs in Z-DNA.
J.Mol.Biol., 216, 1990
8SDW
DownloadVisualize
BU of 8sdw by Molmil
Crystal structure of the non-myristoylated mutant [L8K]Arf1 in complex with a GDP analogue
Descriptor: ADP-ribosylation factor 1, GUANOSINE-3'-MONOPHOSPHATE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Rosenberg Jr, E.M, Randazzo, P.A, Esser, L, Xia, D.
Deposit date:2023-04-07
Release date:2023-06-28
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Point mutations in Arf1 reveal cooperative effects of the N-terminal extension and myristate for GTPase-activating protein catalytic activity.
Plos One, 19, 2024
8SLQ
DownloadVisualize
BU of 8slq by Molmil
Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-3
Descriptor: Transient receptor potential cation channel subfamily M member 5
Authors:Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
Deposit date:2023-04-24
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
1DI8
DownloadVisualize
BU of 1di8 by Molmil
THE STRUCTURE OF CYCLIN-DEPENDENT KINASE 2 (CDK2) IN COMPLEX WITH 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE
Descriptor: 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE, CYCLIN-DEPENDENT KINASE 2
Authors:Shewchuk, L, Hassell, A, Kuyper, L.F.
Deposit date:1999-11-29
Release date:2000-11-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding mode of the 4-anilinoquinazoline class of protein kinase inhibitor: X-ray crystallographic studies of 4-anilinoquinazolines bound to cyclin-dependent kinase 2 and p38 kinase.
J.Med.Chem., 43, 2000
1DK4
DownloadVisualize
BU of 1dk4 by Molmil
CRYSTAL STRUCTURE OF MJ0109 GENE PRODUCT INOSITOL MONOPHOSPHATASE
Descriptor: INOSITOL MONOPHOSPHATASE, PHOSPHATE ION, ZINC ION
Authors:Stec, B, Yang, H, Johnson, K.A, Chen, L, Roberts, M.F.
Deposit date:1999-12-06
Release date:2000-11-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:MJ0109 is an enzyme that is both an inositol monophosphatase and the 'missing' archaeal fructose-1,6-bisphosphatase.
Nat.Struct.Biol., 7, 2000
2I0L
DownloadVisualize
BU of 2i0l by Molmil
X-ray crystal structure of Sap97 PDZ2 bound to the C-terminal peptide of HPV18 E6.
Descriptor: Disks large homolog 1, peptide E6
Authors:Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M.
Deposit date:2006-08-10
Release date:2007-02-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein.
J.Virol., 81, 2007
1DJ0
DownloadVisualize
BU of 1dj0 by Molmil
THE CRYSTAL STRUCTURE OF E. COLI PSEUDOURIDINE SYNTHASE I AT 1.5 ANGSTROM RESOLUTION
Descriptor: CHLORIDE ION, PSEUDOURIDINE SYNTHASE I
Authors:Foster, P.G, Huang, L, Santi, D.V, Stroud, R.M.
Deposit date:1999-11-30
Release date:2000-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structural basis for tRNA recognition and pseudouridine formation by pseudouridine synthase I.
Nat.Struct.Biol., 7, 2000
1DJP
DownloadVisualize
BU of 1djp by Molmil
CRYSTAL STRUCTURE OF PSEUDOMONAS 7A GLUTAMINASE-ASPARAGINASE WITH THE INHIBITOR DON COVALENTLY BOUND IN THE ACTIVE SITE
Descriptor: 5,5-dihydroxy-6-oxo-L-norleucine, GLUTAMINASE-ASPARAGINASE
Authors:Ortlund, E, Lacount, M.W, Lewinski, K, Lebioda, L.
Deposit date:1999-12-03
Release date:2000-01-24
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Reactions of Pseudomonas 7A glutaminase-asparaginase with diazo analogues of glutamine and asparagine result in unexpected covalent inhibitions and suggests an unusual catalytic triad Thr-Tyr-Glu.
Biochemistry, 39, 2000
8SL8
DownloadVisualize
BU of 8sl8 by Molmil
Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-1
Descriptor: Transient receptor potential cation channel subfamily M member 5
Authors:Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
Deposit date:2023-04-21
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon