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5NP6
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BU of 5np6 by Molmil
70S structure prior to bypassing
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Samatova, E, Klimova, M, Zamora, M, Gil-Carton, D, Rodnina, M, Valle, M.
Deposit date:2017-04-13
Release date:2017-06-14
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Ribosome rearrangements at the onset of translational bypassing.
Sci Adv, 3, 2017
3ZTF
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BU of 3ztf by Molmil
X-ray Structure of the Cyan Fluorescent Protein mTurquoise2 (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-07-07
Release date:2012-03-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
4B5Y
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BU of 4b5y by Molmil
X-ray structure of the cyan fluorescent protein mTurquoise-GL (K206A mutant) in space group C222(1)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Lelimousin, M, Oost, K, Noirclerc-Savoye, M, Gadella, T.W.J, Goedhart, J, Royant, A.
Deposit date:2012-08-08
Release date:2013-08-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Influence of the H148G Mutation on Fluorescence Properties of Cyan Fluorescent Proteins
To be Published
7Q3B
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BU of 7q3b by Molmil
Crystal structure of human STING in complex with 3'3'-c-(2'F,2'dA-isonucA)MP
Descriptor: 3'3'-c-(2'F,2'dA-isonucA)MP, Stimulator of interferon genes protein
Authors:Smola, M, Klima, M, Boura, E.
Deposit date:2021-10-27
Release date:2022-06-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.55733919 Å)
Cite:Discovery of isonucleotidic CDNs as potent STING agonists with immunomodulatory potential.
Structure, 30, 2022
7Q85
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BU of 7q85 by Molmil
Crystal structure of human STING in complex with MD1193
Descriptor: 9-[(1R,6R,8R,13E,15R,17R,18R)-17-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,16-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadec-13-en-8-yl]purin-6-amine, Stimulator of interferon genes protein
Authors:Smola, M, Klima, M, Boura, E.
Deposit date:2021-11-10
Release date:2022-10-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.359 Å)
Cite:Vinylphosphonate-based cyclic dinucleotides enhance STING-mediated cancer immunotherapy.
Eur.J.Med.Chem., 259, 2023
8A23
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BU of 8a23 by Molmil
Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383
Descriptor: (2R,3R,4S,5R)-2-[4-azanyl-5-(2-quinolin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-5-(hydroxymethyl)oxolane-3,4-diol, 2'-O-methyltransferase nsp16, GLYCEROL, ...
Authors:Hanigovsky, M, Krafcikova, P, Klima, M, Boura, E.
Deposit date:2022-06-02
Release date:2023-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383
To Be Published
4R9P
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BU of 4r9p by Molmil
An Expansion to the Smad MH2-family: The structure of the N-MH2 expanded domain
Descriptor: RE28239p
Authors:Beich-Frandsen, M, Aragon, E, Llimargas, M, Benach, J, Riera, A, Macias, M.J.
Deposit date:2014-09-06
Release date:2015-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.592 Å)
Cite:Structure of the N-terminal domain of the protein Expansion: an 'Expansion' to the Smad MH2
Acta Crystallogr.,Sect.D, 71, 2015
6R35
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BU of 6r35 by Molmil
Structure of the LecB lectin from Pseudomonas aeruginosa strain PAO1 in complex with lewis x tetrasaccharide
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Fucose-binding lectin PA-IIL, ...
Authors:Lepsik, M, Sommer, R, Kuhaudomlarp, S, Lelimousin, M, Varrot, A, Titz, A, Imberty, A.
Deposit date:2019-03-19
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Induction of rare conformation of oligosaccharide by binding to calcium-dependent bacterial lectin: X-ray crystallography and modelling study.
Eur.J.Med.Chem., 177, 2019
7R50
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BU of 7r50 by Molmil
Crystal structure of GMP reductase from mycobacterium smegmatis in complex with GMP.
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, Inosine-5-monophosphate dehydrogenase guaB1
Authors:Dolezal, M, Klima, M, Pichova, I.
Deposit date:2022-02-09
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The mycobacterial guaB1 gene encodes a guanosine 5'-monophosphate reductase with a cystathionine-beta-synthase domain.
Febs J., 289, 2022
2YDZ
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BU of 2ydz by Molmil
X-ray structure of the cyan fluorescent protein SCFP3A (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-03-25
Release date:2012-03-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
8OIV
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BU of 8oiv by Molmil
Monkeypox virus VP39 in complex with SAH and cap0
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Skvara, P, Chalupska, D, Silhan, J, Klima, M, Boura, E.
Deposit date:2023-03-23
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural basis for RNA-cap recognition and methylation by the mpox methyltransferase VP39.
Antiviral Res., 216, 2023
2YE0
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BU of 2ye0 by Molmil
X-ray structure of the cyan fluorescent protein mTurquoise (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-03-25
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
3BHB
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BU of 3bhb by Molmil
Crystal Structure of KMD Phosphopeptide Bound to Human Class I MHC HLA-A2
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Mohammed, F, Cobbold, M, Zarling, A.L, Salim, M, Barrett-Wilt, G.A, Shabanowitz, J, Hunt, D.F, Engelhard, V.H, Willcox, B.E.
Deposit date:2007-11-28
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self
Nat.Immunol., 9, 2008
3BH8
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BU of 3bh8 by Molmil
Crystal Structure of RQA_M Phosphopeptide Bound to HUMAN Class I MHC HLA-A2
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Mohammed, F, Cobbold, M, Zarling, A.L, Salim, M, Barrett-Wilt, G.A, Shabanowitz, J, Hunt, D.F, Engelhard, V.H, Willcox, B.E.
Deposit date:2007-11-28
Release date:2008-10-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self
Nat.Immunol., 9, 2008
3BH9
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BU of 3bh9 by Molmil
Crystal Structure of RTY Phosphopeptide Bound to Human Class I MHC HLA-A2
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Mohammed, F, Cobbold, M, Zarling, A.L, Salim, M, Barrett-Wilt, G.A, Shabanowitz, J, Hunt, D.F, Engelhard, V.H, Willcox, B.E.
Deposit date:2007-11-28
Release date:2008-10-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self
Nat.Immunol., 9, 2008
3BGM
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BU of 3bgm by Molmil
Crystal Structure of PKD2 Phosphopeptide Bound to Human Class I MHC HLA-A2
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Mohammed, F, Cobbold, M, Zarling, A.L, Salim, M, Barrett-Wilt, G.A, Shabanowitz, J, Hunt, D.F, Engelhard, V.H, Willcox, B.E.
Deposit date:2007-11-27
Release date:2008-10-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self
Nat.Immunol., 9, 2008
6YHU
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BU of 6yhu by Molmil
Crystal structure of the nsp7-nsp8 complex of SARS-CoV-2
Descriptor: Replicase polyprotein 1a
Authors:Konkolova, E, Klima, M, Boura, E.
Deposit date:2020-03-31
Release date:2020-04-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of the putative SARS-CoV-2 primase complex.
J.Struct.Biol., 211, 2020
3FRI
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BU of 3fri by Molmil
Structure of the 16S rRNA methylase RmtB, I222
Descriptor: 16S rRNA methylase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schmitt, E, Galimand, M, Panvert, M, Dupechez, M, Courvalin, P, Mechulam, Y.
Deposit date:2009-01-08
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural bases for 16 S rRNA methylation catalyzed by ArmA and RmtB methyltransferases
J.Mol.Biol., 388, 2009
3FRH
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BU of 3frh by Molmil
Structure of the 16S rRNA methylase RmtB, P21
Descriptor: 16S rRNA methylase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schmitt, E, Galimand, M, Panvert, M, Dupechez, M, Courvalin, P, Mechulam, Y.
Deposit date:2009-01-08
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural bases for 16 S rRNA methylation catalyzed by ArmA and RmtB methyltransferases
J.Mol.Biol., 388, 2009
3FZG
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BU of 3fzg by Molmil
Structure of the 16S rRNA methylase ArmA
Descriptor: 16S rRNA methylase, S-ADENOSYLMETHIONINE
Authors:Schmitt, E, Galimand, M, Panvert, M, Courvalin, P, Mechulam, Y.
Deposit date:2009-01-26
Release date:2009-08-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural bases for 16 S rRNA methylation catalyzed by ArmA and RmtB methyltransferases
J.Mol.Biol., 388, 2009
8P7A
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BU of 8p7a by Molmil
Crystal structure of the ORD domain of human ORP8
Descriptor: Oxysterol-binding protein-related protein 8
Authors:Eisenreichova, A, Klima, M, Boura, E.
Deposit date:2023-05-30
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Crystal Structure of the ORP8 Lipid Transport ORD Domain: Model of Lipid Transport.
Cells, 12, 2023
7ZIU
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BU of 7ziu by Molmil
Crystal structure of Ntaya virus NS5 polymerase domain
Descriptor: Genome polyprotein, ZINC ION
Authors:Krejcova, K, Klima, M, Boura, E.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional insights in flavivirus NS5 proteins gained by the structure of Ntaya virus polymerase and methyltransferase.
Structure, 32, 2024
8PEM
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BU of 8pem by Molmil
Zika Methyltransferase in complex with AT-9010 and SAH
Descriptor: MAGNESIUM ION, RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Krejcova, K, Boura, E, Klima, M.
Deposit date:2023-06-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Zika Methyltransferase in complex with AT-9010 and SAH
to be published
8B07
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BU of 8b07 by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with sinefungin
Descriptor: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, SINEFUNGIN
Authors:Silhan, J, Klima, M, Boura, E.
Deposit date:2022-09-07
Release date:2023-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
8QDJ
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BU of 8qdj by Molmil
Ntaya virus methyltransferase in complex wih Sinefungin
Descriptor: Ntaya virus methyltransferase, SINEFUNGIN, SULFATE ION
Authors:Krejcova, K, Boura, E, Klima, M.
Deposit date:2023-08-29
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional insights in flavivirus NS5 proteins gained by the structure of Ntaya virus polymerase and methyltransferase.
Structure, 32, 2024

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PDB entries from 2024-11-13

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