Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3JBC
DownloadVisualize
BU of 3jbc by Molmil
Complex of Poliovirus with VHH PVSP29F
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
Deposit date:2015-08-26
Release date:2016-01-27
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
3JBG
DownloadVisualize
BU of 3jbg by Molmil
Complex of poliovirus with VHH PVSS21E
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
Deposit date:2015-08-26
Release date:2016-01-27
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
3JVX
DownloadVisualize
BU of 3jvx by Molmil
Crystal structure of Bacillus anthracis dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-(3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120A)
Descriptor: 6-ethyl-5-[3-(3,4,5-trimethoxyphenyl)prop-1-yn-1-yl]pyrimidine-2,4-diamine, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Anderson, A.C, Beierlein, J.M, Karri, N.G.
Deposit date:2009-09-17
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published
3JW5
DownloadVisualize
BU of 3jw5 by Molmil
Crystal structure of Bacillus anthracis (Y102F) dihydrofolate reductase complexed with NADPH and Trimethoprim
Descriptor: Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIMETHOPRIM
Authors:Anderson, A.C, Beierlein, J.M, Karri, N.G.
Deposit date:2009-09-17
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published
3S9U
DownloadVisualize
BU of 3s9u by Molmil
Bacillus anthracis Dihydrofolate Reductase bound to propargyl-linked TMP analog, UCP120J
Descriptor: 6-ethyl-5-[3-(4-methoxybiphenyl-3-yl)prop-1-yn-1-yl]pyrimidine-2,4-diamine, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Anderson, A.C, Beierlein, J.M.
Deposit date:2011-06-02
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Activity Studies of Heterocyclic Propargyl-linked TMP Analogs Targeting Bacillus anthracis Dihydrofolate Reductase
To be Published
3SJQ
DownloadVisualize
BU of 3sjq by Molmil
Crystal structure of a small conductance potassium channel splice variant complexed with calcium-calmodulin
Descriptor: 1-phenylurea, CALCIUM ION, Calmodulin, ...
Authors:Zhang, M, Pascal, J.M, Zhang, J.-F.
Deposit date:2011-06-21
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for calmodulin as a dynamic calcium sensor.
Structure, 20, 2012
3K4E
DownloadVisualize
BU of 3k4e by Molmil
Puf3 RNA binding domain bound to Cox17 RNA 3' UTR recognition sequence site A
Descriptor: RNA (5'-R(P*CP*UP*UP*GP*UP*AP*UP*AP*UP*A)-3'), mRNA-binding protein PUF3
Authors:Zhu, D, Stumpf, C.R, Krahn, J.M, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-05
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs.
Proc.Natl.Acad.Sci.USA, 106, 2009
3J48
DownloadVisualize
BU of 3j48 by Molmil
Cryo-EM structure of Poliovirus 135S particles
Descriptor: Protein VP1, Protein VP2, Protein VP3
Authors:Butan, C, Fiman, D.J, Hogle, J.M.
Deposit date:2013-06-28
Release date:2013-12-04
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Cryo-Electron Microscopy Reconstruction Shows Poliovirus 135S Particles Poised for Membrane Interaction and RNA Release.
J.Virol., 88, 2014
3J4B
DownloadVisualize
BU of 3j4b by Molmil
Structure of T7 gatekeeper protein (gp11)
Descriptor: Tail tubular protein A
Authors:Cuervo, A, Pulido-Cid, M, Chagoyen, M, Arranz, R, Gonzalez-Garcia, V.A, Garcia-Doval, C, Caston, J.R, Valpuesta, J.M, van Raaij, M.J, Martin-Benito, J, Carrascosa, J.L.
Deposit date:2013-07-09
Release date:2013-08-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structural characterization of the bacteriophage t7 tail machinery.
J.Biol.Chem., 288, 2013
3QVD
DownloadVisualize
BU of 3qvd by Molmil
Exposure of rubrerythrin from Pyrococcus furiosus to peroxide, fifteen second time point.
Descriptor: FE (II) ION, FE (III) ION, HYDROGEN PEROXIDE, ...
Authors:Dillard, B.D, Demick, J.M, Adams, M.W.W, Lanzilotta, W.N.
Deposit date:2011-02-25
Release date:2011-06-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:A cryo-crystallographic time course for peroxide reduction by rubrerythrin from Pyrococcus furiosus.
J.Biol.Inorg.Chem., 16, 2011
3KML
DownloadVisualize
BU of 3kml by Molmil
Circular Permutant of the Tobacco Mosaic Virus
Descriptor: Coat protein
Authors:Duderstadt, K.E, Dedeo, M.T, Francis, M.B, Berger, J.M.
Deposit date:2009-11-10
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.011 Å)
Cite:Nanoscale protein assemblies from a circular permutant of the tobacco mosaic virus.
Nano Lett., 10, 2010
3L49
DownloadVisualize
BU of 3l49 by Molmil
CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER SUBUNIT FROM Rhodobacter sphaeroides 2.4.1
Descriptor: ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit, UNKNOWN LIGAND
Authors:Patskovsky, Y, Ozyurt, S, Dickey, M, Do, J, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-12-18
Release date:2010-01-05
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER FROM Rhodobacter sphaeroides
To be Published
3KTS
DownloadVisualize
BU of 3kts by Molmil
CRYSTAL STRUCTURE OF GLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN FROM LISTERIA MONOCYTOGENES STR. 4b F2365
Descriptor: Glycerol uptake operon antiterminator regulatory protein, UNKNOWN LIGAND
Authors:Patskovsky, Y, Toro, R, Freeman, J, Do, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-11-25
Release date:2009-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:CRYSTAL STRUCTURE OF GLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN FROM LISTERIA MONOCYTOGENES STR. 4b F2365
To be Published
3KPT
DownloadVisualize
BU of 3kpt by Molmil
Crystal structure of BcpA, the major pilin subunit of Bacillus cereus
Descriptor: CALCIUM ION, Collagen adhesion protein
Authors:Poor, C.B, Budzik, J.M, Schneewind, O, He, C.
Deposit date:2009-11-16
Release date:2009-11-24
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Intramolecular amide bonds stabilize pili on the surface of bacilli.
Proc.Natl.Acad.Sci.USA, 106, 2009
3RKP
DownloadVisualize
BU of 3rkp by Molmil
Crystal structure of BcpA*(D312A), the major pilin subunit of Bacillus cereus
Descriptor: Collagen adhesion protein
Authors:Hendrickx, A.P, Poor, C.B, Jureller, J.E, Budzik, J.M, He, C, Schneewind, O.
Deposit date:2011-04-18
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.243 Å)
Cite:Isopeptide bonds of the major pilin protein BcpA influence pilus structure and bundle formation on the surface of Bacillus cereus.
Mol.Microbiol., 85, 2012
3RTO
DownloadVisualize
BU of 3rto by Molmil
Acoustically mounted porcine insulin microcrystals yield an X-ray SAD structure
Descriptor: Insulin, ZINC ION
Authors:Soares, A.S, Engel, M.A, Stearns, R, Datwani, S, Olechno, J, Ellson, R, Skinner, J.M, Allaire, M, Orville, A.M.
Deposit date:2011-05-03
Release date:2011-05-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Acoustically Mounted Microcrystals Yield High-Resolution X-ray Structures.
Biochemistry, 50, 2011
3IYC
DownloadVisualize
BU of 3iyc by Molmil
Poliovirus late RNA-release intermediate
Descriptor: Capsid protein VP1, Capsid protein VP2, Genome polyprotein, ...
Authors:Levy, H.C, Bostina, M, Filman, D.J, Hogle, J.M.
Deposit date:2009-07-21
Release date:2010-03-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Catching a virus in the act of RNA release: a novel poliovirus uncoating intermediate characterized by cryo-electron microscopy.
J.Virol., 84, 2010
3Q6E
DownloadVisualize
BU of 3q6e by Molmil
Human insulin in complex with cucurbit[7]uril
Descriptor: Insulin A chain, Insulin B chain, cucurbit[7]uril
Authors:Chinai, J.M, Taylor, A.B, Hargreaves, N.D, Ryno, L.M, Morris, C.A, Hart, P.J, Urbach, A.R.
Deposit date:2010-12-31
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular recognition of insulin by a synthetic receptor.
J.Am.Chem.Soc., 133, 2011
3Q6K
DownloadVisualize
BU of 3q6k by Molmil
Salivary protein from Lutzomyia longipalpis
Descriptor: 43.2 kDa salivary protein, CITRIC ACID, SEROTONIN
Authors:Andersen, J.F, Xu, X, Chang, B.W, Collin, N, Valenzuela, J.G, Ribeiro, J.M.
Deposit date:2011-01-02
Release date:2011-07-27
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structure and function of a "yellow" protein from saliva of the sand fly Lutzomyia longipalpis that confers protective immunity against Leishmania major infection.
J.Biol.Chem., 286, 2011
3JWF
DownloadVisualize
BU of 3jwf by Molmil
Crystal structure of Bacillus anthracis (Y102F) dihydrofolate reductase complexed with NADPH and (R)-2,4-diamino-5-(3-hydroxy-3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-methylpyrimidine (UCP113A)
Descriptor: (1R)-3-(2,4-diamino-6-methylpyrimidin-5-yl)-1-(3,4,5-trimethoxyphenyl)prop-2-yn-1-ol, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Anderson, A.C, Beierlein, J.M, Karri, N.G.
Deposit date:2009-09-18
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Targeted Mutations in Bacillus anthracis Dihydrofolate Reductase Condense Complex Structure-Activity Relationships
J.Med.Chem., 2010
3K9D
DownloadVisualize
BU of 3k9d by Molmil
CRYSTAL STRUCTURE OF PROBABLE ALDEHYDE DEHYDROGENASE FROM Listeria monocytogenes EGD-e
Descriptor: ALDEHYDE DEHYDROGENASE, CHLORIDE ION, GLYCEROL
Authors:Patskovsky, Y, Toro, R, Freeman, J, Miller, S, Sauder, J.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-15
Release date:2009-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Aldehyde Dehydrogenase from Listeria Monocytogenes
To be Published
3KAK
DownloadVisualize
BU of 3kak by Molmil
Structure of homoglutathione synthetase from Glycine max in open conformation with gamma-glutamyl-cysteine bound.
Descriptor: GAMMA-GLUTAMYLCYSTEINE, Homoglutathione synthetase
Authors:Galant, A, Arkus, K.A.J, Zubieta, C, Cahoon, R.E, Jez, J.M.
Deposit date:2009-10-19
Release date:2009-12-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural Basis for Evolution of Product Diversity in Soybean Glutathione Biosynthesis.
Plant Cell, 21, 2009
3J2P
DownloadVisualize
BU of 3j2p by Molmil
CryoEM structure of Dengue virus envelope protein heterotetramer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Zhang, X, Ge, P, Yu, X, Brannan, J.M, Bi, G, Zhang, Q, Schein, S, Zhou, Z.H.
Deposit date:2012-11-30
Release date:2012-12-19
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the mature dengue virus at 3.5-A resolution.
Nat.Struct.Mol.Biol., 20, 2012
3K4W
DownloadVisualize
BU of 3k4w by Molmil
CRYSTAL STRUCTURE OF Uncharacterized Tim-Barrel Protein Bb4693 From Bordetella Bronchiseptica
Descriptor: uncharacterized protein Bb4693
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-06
Release date:2009-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:CRYSTAL STRUCTURE OF Uncharacterized Tim-Barrel Protein Bb4693 From Bordetella Bronchiseptica
To be Published
3JW3
DownloadVisualize
BU of 3jw3 by Molmil
Crystal structure of Bacillus anthracis (F96I) dihydrofolate reductase complexed with NADPH and Trimethoprim
Descriptor: Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIMETHOPRIM
Authors:Anderson, A.C, Beierlein, J.M, Karri, N.G.
Deposit date:2009-09-17
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon