Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5TL7
DownloadVisualize
BU of 5tl7 by Molmil
Crystal structure of SARS-CoV papain-like protease in complex with C-terminal domain mouse ISG15
Descriptor: Replicase polyprotein 1ab, Ubiquitin-like protein ISG15, ZINC ION
Authors:Daczkowski, C.D, Dzimianski, J.V, Pegan, S.D.
Deposit date:2016-10-10
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural Insights into the Interaction of Coronavirus Papain-Like Proteases and Interferon-Stimulated Gene Product 15 from Different Species.
J. Mol. Biol., 429, 2017
5VX0
DownloadVisualize
BU of 5vx0 by Molmil
Bak in complex with Bim-h3Glg
Descriptor: 1,2-ETHANEDIOL, Bcl-2 homologous antagonist/killer, Bcl-2-like protein 11, ...
Authors:Brouwer, J.M, Lan, P, Lessene, G, Colman, P.M, Czabotar, P.E.
Deposit date:2017-05-23
Release date:2017-11-15
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design.
Mol. Cell, 68, 2017
5VWW
DownloadVisualize
BU of 5vww by Molmil
Bak core latch dimer in complex with Bim-RT - Tetragonal
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BROMIDE ION, Bcl-2 homologous antagonist/killer, ...
Authors:Brouwer, J.M, Colman, P.M, Czabotar, P.E.
Deposit date:2017-05-23
Release date:2017-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design.
Mol. Cell, 68, 2017
5T5V
DownloadVisualize
BU of 5t5v by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 293K
Descriptor: FE (III) ION, Seed linoleate 13S-lipoxygenase-1
Authors:Poss, E.M, Fraser, J.S.
Deposit date:2016-08-31
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hydrogen-Deuterium Exchange of Lipoxygenase Uncovers a Relationship between Distal, Solvent Exposed Protein Motions and the Thermal Activation Barrier for Catalytic Proton-Coupled Electron Tunneling.
ACS Cent Sci, 3, 2017
5T3S
DownloadVisualize
BU of 5t3s by Molmil
HIV gp140 trimer MD39-10MUTA in complex with Fabs PGT124 and 35022
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2016-08-26
Release date:2016-09-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:HIV Vaccine Design to Target Germline Precursors of Glycan-Dependent Broadly Neutralizing Antibodies.
Immunity, 45, 2016
5W6D
DownloadVisualize
BU of 5w6d by Molmil
Crystal structure of BG505-SOSIP.v4.1-GT1-N137A in complex with Fabs 35022 and 9H/109L
Descriptor: 109L FAB light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Garces, F, Stanfield, R.L, Wilson, I.A.
Deposit date:2017-06-16
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.202 Å)
Cite:Design and crystal structure of a native-like HIV-1 envelope trimer that engages multiple broadly neutralizing antibody precursors in vivo.
J. Exp. Med., 214, 2017
5VWZ
DownloadVisualize
BU of 5vwz by Molmil
Bak in complex with Bim-h3Pc
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, AMMONIUM ION, Bcl-2 homologous antagonist/killer, ...
Authors:Brouwer, J.M, Colman, P.M, Czabotar, P.E.
Deposit date:2017-05-23
Release date:2017-11-15
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.622 Å)
Cite:Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design.
Mol. Cell, 68, 2017
1T05
DownloadVisualize
BU of 1t05 by Molmil
HIV-1 reverse transcriptase crosslinked to template-primer with tenofovir-diphosphate bound as the incoming nucleotide substrate
Descriptor: GLYCEROL, MAGNESIUM ION, POL polyprotein, ...
Authors:Tuske, S, Sarafianos, S.G, Ding, J, Arnold, E.
Deposit date:2004-04-07
Release date:2004-05-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of HIV-1 RT-DNA complexes before and after incorporation of the anti-AIDS drug tenofovir
Nat.Struct.Mol.Biol., 11, 2004
5VWY
DownloadVisualize
BU of 5vwy by Molmil
Bak core latch dimer in complex with Bim-h3Pc-RT
Descriptor: Bcl-2 homologous antagonist/killer, Bcl-2-like protein 11, PHOSPHATE ION
Authors:Brouwer, J.M, Colman, P.M, Czabotar, P.E.
Deposit date:2017-05-23
Release date:2017-11-15
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.555 Å)
Cite:Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design.
Mol. Cell, 68, 2017
5VWX
DownloadVisualize
BU of 5vwx by Molmil
Bak core latch dimer in complex with Bim-h0-h3Glt
Descriptor: 1,2-ETHANEDIOL, Bcl-2 homologous antagonist/killer, Bcl-2-like protein 11
Authors:Brouwer, J.M, Lan, P, Lessene, G, Colman, P.M, Czabotar, P.E.
Deposit date:2017-05-23
Release date:2017-11-15
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.489 Å)
Cite:Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design.
Mol. Cell, 68, 2017
1T03
DownloadVisualize
BU of 1t03 by Molmil
HIV-1 reverse transcriptase crosslinked to tenofovir terminated template-primer (complex P)
Descriptor: MAGNESIUM ION, POL polyprotein, Synthetic oligonucleotide primer, ...
Authors:Tuske, S, Sarafianos, S.G, Ding, J, Arnold, E.
Deposit date:2004-04-07
Release date:2004-05-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of HIV-1 RT-DNA complexes before and after incorporation of the anti-AIDS drug tenofovir
Nat.Struct.Mol.Biol., 11, 2004
4FXE
DownloadVisualize
BU of 4fxe by Molmil
Crystal structure of the intact E. coli RelBE toxin-antitoxin complex
Descriptor: Antitoxin RelB, SULFATE ION, mRNA interferase RelE
Authors:Brodersen, D.E, Boggild, A, Sofos, N.
Deposit date:2012-07-03
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7503 Å)
Cite:The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
7M1Z
DownloadVisualize
BU of 7m1z by Molmil
Targeting Enterococcus faecalis HMG-CoA reductase with a novel non-statin inhibitor
Descriptor: (R)-MEVALONATE, 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A, ACETATE ION, ...
Authors:Bose, S, Steussy, C.N, Stauffacher, C.V.
Deposit date:2021-03-15
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Targeting Enterococcus faecalis HMG-CoA reductase with a non-statin inhibitor
Nat Commun, 2023
7M66
DownloadVisualize
BU of 7m66 by Molmil
Targeting Enterococcus faecalis HMG-CoA reductase with a novel non-statin inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Bose, S, Steussy, C.N.
Deposit date:2021-03-25
Release date:2022-09-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Targeting Enterococcus faecalis HMG-CoA reductase with a non-statin inhibitor.
Commun Biol, 6, 2023
4FXI
DownloadVisualize
BU of 4fxi by Molmil
Crystal structure of the isolated E. coli RelE toxin, P21 form
Descriptor: SULFATE ION, mRNA interferase RelE
Authors:Brodersen, D.E, Boggild, A, Sofos, N.
Deposit date:2012-07-03
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8003 Å)
Cite:The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
4HF4
DownloadVisualize
BU of 4hf4 by Molmil
Crystal Structure of PDE10A with a biaryl ether inhibitor (1-(1-(3-(4-(benzo[d]thiazol-2-ylamino)phenoxy)pyrazin-2-yl)piperidin-4-yl)ethanol)
Descriptor: (1S)-1-(1-{3-[4-(1,3-benzothiazol-2-ylamino)phenoxy]pyrazin-2-yl}piperidin-4-yl)ethanol, GLYCEROL, SULFATE ION, ...
Authors:Chmait, S, Jordan, S.
Deposit date:2012-10-04
Release date:2012-12-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of selective biaryl ethers as PDE10A inhibitors: Improvement in potency and mitigation of Pgp-mediated efflux.
Bioorg.Med.Chem.Lett., 22, 2012
7MYG
DownloadVisualize
BU of 7myg by Molmil
M. tb Ag85C modified by THL-10d
Descriptor: Diacylglycerol acyltransferase, GLYCEROL
Authors:Sudasinghe, T.D, Ronning, D.R.
Deposit date:2021-05-21
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Total Synthesis of Tetrahydrolipstatin, Its Derivatives, and Evaluation of Their Ability to Potentiate Multiple Antibiotic Classes against Mycobacterium Species.
Acs Infect Dis., 7, 2021
3QUJ
DownloadVisualize
BU of 3quj by Molmil
Crystal structure of the phosphonate binding protein, PhnD, from Escherichia coli
Descriptor: PhnD, subunit of alkylphosphonate ABC transporter, UNKNOWN LIGAND
Authors:Alicea, I, Schreiter, E.R.
Deposit date:2011-02-24
Release date:2011-10-12
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the Escherichia coli Phosphonate Binding Protein PhnD and Rationally Optimized Phosphonate Biosensors.
J.Mol.Biol., 414, 2011
7MZT
DownloadVisualize
BU of 7mzt by Molmil
Borrelia burgdorferi BBK32-C in complex with an autolytic fragment of human C1r at 4.1A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C1r subcomponent heavy chain, Complement C1r subcomponent light chain, ...
Authors:Garcia, B.L.
Deposit date:2021-05-24
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (4.07 Å)
Cite:A Structural Basis for Inhibition of the Complement Initiator Protease C1r by Lyme Disease Spirochetes.
J Immunol., 207, 2021
4HEU
DownloadVisualize
BU of 4heu by Molmil
Crystal Structure of PDE10A with a biaryl ether inhibitor ((1-(3-(4-((1H-benzo[d]imidazol-2-yl)amino)phenoxy)pyridin-2-yl)piperidin-4-yl)methanol)
Descriptor: (1-{3-[4-(1H-benzimidazol-2-ylamino)phenoxy]pyridin-2-yl}piperidin-4-yl)methanol, SULFATE ION, ZINC ION, ...
Authors:Chmait, S, Jordan, S.
Deposit date:2012-10-04
Release date:2012-12-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of selective biaryl ethers as PDE10A inhibitors: Improvement in potency and mitigation of Pgp-mediated efflux.
Bioorg.Med.Chem.Lett., 22, 2012
7NA3
DownloadVisualize
BU of 7na3 by Molmil
HDM2 in complex with compound 62
Descriptor: 3-[4-(5-chloropyridin-3-yl)-2-[(2S)-1-methoxypropan-2-yl]-3-{(1R)-1-[(1r,4R)-4-methylcyclohexyl]ethyl}-3H-imidazo[4,5-c]pyridin-6-yl]-1,2,4-oxadiazol-5(4H)-one, Isoform 11 of E3 ubiquitin-protein ligase Mdm2, SULFATE ION
Authors:Scapin, G.
Deposit date:2021-06-19
Release date:2021-11-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Discovery of MK-4688 : an Efficient Inhibitor of the HDM2-p53 Protein-Protein Interaction.
J.Med.Chem., 64, 2021
7NA2
DownloadVisualize
BU of 7na2 by Molmil
HDM2 in complex with compound 56
Descriptor: 3-[4-(5-chloropyridin-3-yl)-2-[(4aR,7aR)-hexahydrocyclopenta[b][1,4]oxazin-4(4aH)-yl]-3-{[(1r,4R)-4-methylcyclohexyl]methyl}-3H-imidazo[4,5-c]pyridin-6-yl]-1,2,4-oxadiazol-5(4H)-one, Isoform 11 of E3 ubiquitin-protein ligase Mdm2
Authors:Scapin, G.
Deposit date:2021-06-19
Release date:2021-11-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Discovery of MK-4688 : an Efficient Inhibitor of the HDM2-p53 Protein-Protein Interaction.
J.Med.Chem., 64, 2021
7NA1
DownloadVisualize
BU of 7na1 by Molmil
HDM2 in complex with compound 2
Descriptor: 8-(1-benzothiophen-5-yl)-7-[(4-chlorophenyl)methyl]-6-{[(1R)-1-cyclopropylethyl]amino}-7H-purine-2-carboxylic acid, CITRIC ACID, E3 ubiquitin-protein ligase Mdm2, ...
Authors:Scapin, G.
Deposit date:2021-06-19
Release date:2021-11-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of MK-4688 : an Efficient Inhibitor of the HDM2-p53 Protein-Protein Interaction.
J.Med.Chem., 64, 2021
7NA4
DownloadVisualize
BU of 7na4 by Molmil
HDM2 in complex with compound 63
Descriptor: 3-[4-(5-chloropyridin-3-yl)-2-[(R)-cyclopropyl(ethoxy)methyl]-3-{(1R)-1-[(1r,4R)-4-methylcyclohexyl]ethyl}-3H-imidazo[4,5-c]pyridin-6-yl]-1,2,4-oxadiazol-5(4H)-one, CHLORIDE ION, GLYCEROL, ...
Authors:Scapin, G.
Deposit date:2021-06-19
Release date:2021-11-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Discovery of MK-4688 : an Efficient Inhibitor of the HDM2-p53 Protein-Protein Interaction.
J.Med.Chem., 64, 2021
7MX3
DownloadVisualize
BU of 7mx3 by Molmil
Crystal structure of human RIPK3 complexed with GSK'843
Descriptor: 1,2-ETHANEDIOL, 3-(1,3-benzothiazol-5-yl)-7-(1,3-dimethyl-1H-pyrazol-5-yl)thieno[3,2-c]pyridin-4-amine, Receptor-interacting serine/threonine-protein kinase 3
Authors:Davies, K.A, Czabotar, P.E.
Deposit date:2021-05-18
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Human RIPK3 maintains MLKL in an inactive conformation prior to cell death by necroptosis.
Nat Commun, 12, 2021

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon