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Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of B38, Light chain of B38, ...
Authors:	Wu, Y, Qi, J, Gao, F.
Deposit date:	2020-04-26
Release date:	2020-05-13
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (1.84 Å)
Cite:	A noncompeting pair of human neutralizing antibodies block COVID-19 virus binding to its receptor ACE2. Science, 368, 2020

4KPS

Structure and receptor binding specificity of the hemagglutinin H13 from avian influenza A virus H13N6
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, ...
Authors:	Lu, X, Qi, J, Shi, Y, Gao, G.
Deposit date:	2013-05-14
Release date:	2013-07-03
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.587 Å)
Cite:	Structure and Receptor Binding Specificity of Hemagglutinin H13 from Avian Influenza A Virus H13N6 J.Virol., 87, 2013

4KPQ

Structure and receptor binding specificity of the hemagglutinin H13 from avian influenza A virus H13N6
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:	Lu, X, Qi, J, Shi, Y, Gao, G.
Deposit date:	2013-05-14
Release date:	2013-07-03
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.502 Å)
Cite:	Structure and Receptor Binding Specificity of Hemagglutinin H13 from Avian Influenza A Virus H13N6 J.Virol., 87, 2013

7E0B

The crystal structure of sorting nexin 27 and PBM complex
Descriptor:	PBM, Sorting nexin-27
Authors:	Shang, G.J, Qi, J.X.
Deposit date:	2021-01-27
Release date:	2022-02-02
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (1.29 Å)
Cite:	SNX27 suppresses SARS-CoV-2 infection by inhibiting viral lysosome/late endosome entry. Proc.Natl.Acad.Sci.USA, 119, 2022

6J2A

The structure of HLA-A*3003/NP44
Descriptor:	Beta-2-microglobulin, HLA-A*3003, NP44
Authors:	Zhu, S.Y, Liu, K.F, Chai, Y, Ding, C.M, Lv, J.X, Gao, F.G, Lou, Y.L, Liu, W.J.
Deposit date:	2018-12-31
Release date:	2019-09-25
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	*Divergent Peptide Presentations of HLA-A30 Alleles Revealed by Structures With Pathogen Peptides.** Front Immunol, 10, 2019

6J9O

Crystal structure of a free scFv molecule from a group 2 influenza A viruses HA binding antibody AF4H1K1
Descriptor:	Heavy chain of AF4H1K1 scFv, Light chain of AF4H1K1 scFv
Authors:	Xiao, H.X, Qi, J.X, Gao, F.G.
Deposit date:	2019-01-23
Release date:	2020-01-29
Last modified:	2021-02-10
Method:	X-RAY DIFFRACTION (1.397 Å)
Cite:	Light chain modulates heavy chain conformation to change protection profile of monoclonal antibodies against influenza A viruses. Cell Discov, 5, 2019

6J29

The structure of HLA-A*3003/MTB
Descriptor:	Beta-2-microglobulin, HLA-A*3003, MTB
Authors:	Zhu, S.Y, Liu, K.F, Chai, Y, Ding, C.M, Lv, J.X, Gao, F.G, Lou, Y.L, Liu, W.J.
Deposit date:	2018-12-31
Release date:	2019-09-25
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	*Divergent Peptide Presentations of HLA-A30 Alleles Revealed by Structures With Pathogen Peptides.** Front Immunol, 10, 2019

6K7T

Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with Hendra virus-derived peptide HeV1--human beta-2 microglobulin
Descriptor:	Beta-2-microglobulin, HeV1, MHC class I antigen
Authors:	Lu, D, Liu, K.F, Zhang, D, Yue, C, Lu, Q, Cheng, H, Chai, Y, Qi, J.X, Gao, F.G, Liu, W.J.
Deposit date:	2019-06-08
Release date:	2019-11-06
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats. Plos Biol., 17, 2019

5ZL2

Crystal structure of Bourbon virus envelope glycoprotein at pH8.0
Descriptor:	Envelope glycoprotein
Authors:	Qi, J.X, Peng, R.C, Wu, Y, Gao, F.
Deposit date:	2018-03-26
Release date:	2019-03-27
Method:	X-RAY DIFFRACTION (2.703 Å)
Cite:	The postfusion structure of human-infecting Bourbon virus envelope glycoprotein implicates the host adaptation properties of thogotoviruses To Be Published

5ZKX

The postfusion structure of human-infecting Bourbon virus envelope glycoprotein
Descriptor:	Envelope glycoprotein
Authors:	Qi, J.X, Wu, Y, Peng, R.C, Gao, F.
Deposit date:	2018-03-26
Release date:	2019-03-27
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Postfusion structure of human-infecting Bourbon virus envelope glycoprotein. J.Struct.Biol., 208, 2019

4F7M

Crystal Structure of HLA-A*2402 Complexed with a Newly Identified Peptide from 2009 H1N1 PA (649-658)
Descriptor:	Beta-2-microglobulin, HLA class I histocompatibility antigen, A-24 alpha chain, ...
Authors:	Liu, J, Zhang, S, Tan, S, Yi, Y, Wu, B, Zhu, F, Wang, H, Qi, J, George, F.G.
Deposit date:	2012-05-16
Release date:	2012-10-10
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Cross-Allele Cytotoxic T Lymphocyte Responses against 2009 Pandemic H1N1 Influenza A Virus among HLA-A24 and HLA-A3 Supertype-Positive Individuals. J.Virol., 86, 2012

6K7O

Complex structure of LILRB4 and h128-3 antibody
Descriptor:	Leukocyte immunoglobulin-like receptor subfamily B member 4, h128-3 Fab heavy chain, h128-3 Fab light chain
Authors:	Song, H, Chai, Y, Xu, X, Gao, F.G.
Deposit date:	2019-06-08
Release date:	2019-07-03
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (3.004 Å)
Cite:	Disrupting LILRB4/APOE Interaction by an Efficacious Humanized Antibody Reverses T-cell Suppression and Blocks AML Development. Cancer Immunol Res, 7, 2019

6K7U

Crystal structure of beta-2 microglobulin (beta2m) of Bat (Pteropus Alecto)
Descriptor:	Bat beta-2-microglobulin
Authors:	Lu, D, Liu, K.F, Zhang, D, Yue, C, Lu, Q, Cheng, H, Chai, Y, Qi, J.X, Gao, F.G, Liu, W.J.
Deposit date:	2019-06-08
Release date:	2019-09-18
Last modified:	2019-12-04
Method:	X-RAY DIFFRACTION (1.601 Å)
Cite:	Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats. Plos Biol., 17, 2019

8HRD

Crystal structure of the receptor binding domain of SARS-CoV-2 Delta variant in complex with IMCAS74 Fab and W14 Fab
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, IMCAS74 Fab heavy chain, IMCAS74 Fab light chain, ...
Authors:	Zhao, R.C, Wu, L.L, Han, P.
Deposit date:	2022-12-15
Release date:	2023-12-20
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.86 Å)
Cite:	Defining a de novo non-RBM antibody as RBD-8 and its synergistic rescue of immune-evaded antibodies to neutralize Omicron SARS-CoV-2. Proc.Natl.Acad.Sci.USA, 120, 2023

8XS3

Structure of MPXV B6 and D68 fab complex
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D68_heavy chain, ...
Authors:	wu, L.L, Sun, J.Q.
Deposit date:	2024-01-08
Release date:	2024-06-12
Last modified:	2024-06-19
Method:	ELECTRON MICROSCOPY (3.46 Å)
Cite:	Two noncompeting human neutralizing antibodies targeting MPXV B6 show protective effects against orthopoxvirus infections. Nat Commun, 15, 2024

3W0W

The complex between T36-5 TCR and HLA-A24 bound to HIV-1 Nef134-10(2F) peptide in space group P212121
Descriptor:	10-mer peptide from Protein Nef, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-11-05
Release date:	2013-11-06
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.603 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXS

The complex between H27-14 TCR and HLA-A24 bound to HIV-1 Nef134-10(6L) peptide
Descriptor:	10-mer peptide from Protein Nef, Beta-2-microglobulin, H27-14 TCR alpha chain, ...
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXR

The complex between H27-14 TCR and HLA-A24 bound to HIV-1 Nef134-10(wt) peptide
Descriptor:	10-mer peptide from Protein Nef, Beta-2-microglobulin, H27-14 TCR alpha chain, ...
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXP

HLA-A24 in complex with HIV-1 Nef134-10(6L)
Descriptor:	10-mer peptide from Protein Nef, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXT

T36-5 TCR specific for HLA-A24-Nef134-10
Descriptor:	T36-5 TCR alpha chain, T36-5 TCR beta chain
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXN

HLA-A24 in complex with HIV-1 Nef134-10(wt)
Descriptor:	10-mer peptide from Protein Nef, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXO

HLA-A24 in complex with HIV-1 Nef134-10(2F)
Descriptor:	10-mer peptide from Protein Nef, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.61 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXU

The complex between T36-5 TCR and HLA-A24 bound to HIV-1 Nef134-10(2F) peptide
Descriptor:	10-mer peptide from Protein Nef, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXM

The complex between C1-28 TCR and HLA-A24 bound to HIV-1 Nef134-10(2F) peptide
Descriptor:	10-mer peptide from Protein Nef, Beta-2-microglobulin, C1-28 TCR alpha chain, ...
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

3VXQ

H27-14 TCR specific for HLA-A24-Nef134-10
Descriptor:	H27-14 TCR alpha chain, H27-14 TCR beta chain
Authors:	Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
Deposit date:	2012-09-20
Release date:	2013-10-23
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection SCI REP, 3, 2013

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