Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7X7T
DownloadVisualize
BU of 7x7t by Molmil
Cryo-EM structure of SARS-CoV-2 spike protein in complex with three nAbs X01, X10 and X17
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, X01 heavy chain, ...
Authors:Sun, H, Liu, L, Zheng, Q, Li, S, Zhang, T, Xia, N.
Deposit date:2022-03-10
Release date:2022-08-17
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:The neutralizing breadth of antibodies targeting diverse conserved epitopes between SARS-CoV and SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7X7U
DownloadVisualize
BU of 7x7u by Molmil
Cryo-EM structure of SARS-CoV-2 Delta variant spike protein in complex with three nAbs X01, X10 and X17
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, X01 heavy chain, ...
Authors:Sun, H, Liu, L, Zhang, T, Zheng, Q, Li, S, Xia, N.
Deposit date:2022-03-10
Release date:2022-08-17
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:The neutralizing breadth of antibodies targeting diverse conserved epitopes between SARS-CoV and SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
6KYC
DownloadVisualize
BU of 6kyc by Molmil
Structure of the S207A mutant of Clostridium difficile sortase B
Descriptor: Putative peptidase C60B, sortase B
Authors:Kang, C.Y, Huang, I.H, Wu, T.Y, Chang, J.C, Hsiao, Y.Y, Cheng, C.H, Tsai, W.J, Hsu, K.C, Wang, S.Y.
Deposit date:2019-09-17
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Functional analysis ofClostridium difficilesortase B reveals key residues for catalytic activity and substrate specificity.
J.Biol.Chem., 295, 2020
4MTE
DownloadVisualize
BU of 4mte by Molmil
Zinc Uptake Regulator Complexed with Zinc and DNA
Descriptor: ZINC ION, Zinc uptake regulation protein, znuABC operator DNA
Authors:Gilston, B.A, Mondragon, A, O'Halloran, T.V.
Deposit date:2013-09-19
Release date:2014-11-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Mechanistic Basis of Zinc Regulation Across the E. coli Zur Regulon.
Plos Biol., 12, 2014
4MTD
DownloadVisualize
BU of 4mtd by Molmil
Zinc Uptake Regulator Complexed With Zinc AND DNA
Descriptor: ZINC ION, Zinc uptake regulation protein, znuABC operator DNA
Authors:Gilston, B.A, Mondragon, A, O'Halloran, T.V.
Deposit date:2013-09-19
Release date:2014-11-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Mechanistic Basis of Zinc Regulation Across the E. coli Zur Regulon.
Plos Biol., 12, 2014
4N3Y
DownloadVisualize
BU of 4n3y by Molmil
Crystal structure of Rabex-5CC and Rabaptin-5C21 complex
Descriptor: Rab GTPase-binding effector protein 1, Rab5 GDP/GTP exchange factor
Authors:Zhang, Z, Zhang, T, Ding, J.
Deposit date:2013-10-08
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular mechanism for Rabex-5 GEF activation by Rabaptin-5
Elife, 3, 2014
4NK4
DownloadVisualize
BU of 4nk4 by Molmil
Crystal structure of FabI from Candidatus Liberibacter asiaticus
Descriptor: DI(HYDROXYETHYL)ETHER, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Jiang, L, Gao, Z.Q, Dong, Y.H.
Deposit date:2013-11-12
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus.
Protein Sci., 23, 2014
6KYD
DownloadVisualize
BU of 6kyd by Molmil
Structure of the R217A mutant of Clostridium difficile sortase B
Descriptor: Putative peptidase C60B, sortase B
Authors:Kang, C.Y, Huang, I.H, Wu, T.Y, Chang, J.C, Hsiao, Y.Y, Cheng, C.H, Tsai, W.J, Hsu, K.C, Wang, S.Y.
Deposit date:2019-09-18
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Functional analysis ofClostridium difficilesortase B reveals key residues for catalytic activity and substrate specificity.
J.Biol.Chem., 295, 2020
4NK5
DownloadVisualize
BU of 4nk5 by Molmil
Crystal structure of FabI-NAD complex from Candidatus Liberibacter asiaticus
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Jiang, L, Gao, Z.Q, Dong, Y.H.
Deposit date:2013-11-12
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus.
Protein Sci., 23, 2014
3SPF
DownloadVisualize
BU of 3spf by Molmil
Crystal Structure of Bcl-xL bound to BM501
Descriptor: 4-(4-chlorophenyl)-1-[(3S)-3,4-dihydroxybutyl]-N-[3-(4-methylpiperazin-1-yl)propyl]-3-phenyl-1H-pyrrole-2-carboxamide, Bcl-2-like protein 1, GLYCEROL
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2011-07-01
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design of Bcl-2 and Bcl-xL Inhibitors with Subnanomolar Binding Affinities Based upon a New Scaffold.
J.Med.Chem., 55, 2012
2M0Q
DownloadVisualize
BU of 2m0q by Molmil
Solution NMR analysis of intact KCNE2 in detergent micelles demonstrate a straight transmembrane helix
Descriptor: Potassium voltage-gated channel subfamily E member 2
Authors:Lai, C, Li, P, Chen, L, Zhang, L, Wu, F, Tian, C.
Deposit date:2012-11-01
Release date:2014-04-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Differential modulations of KCNQ1 by auxiliary proteins KCNE1 and KCNE2.
Sci Rep, 4, 2014
6VGL
DownloadVisualize
BU of 6vgl by Molmil
JAK2 JH1 in complex with ruxolitinib
Descriptor: (3R)-3-cyclopentyl-3-[4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-08
Release date:2021-01-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
3T93
DownloadVisualize
BU of 3t93 by Molmil
Glutamate bound to a double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
Descriptor: GLUTAMIC ACID, Glutamate receptor 2, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2011-08-02
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.907 Å)
Cite:Mechanism of AMPA Receptor Activation by Partial Agonists: DISULFIDE TRAPPING OF CLOSED LOBE CONFORMATIONS.
J.Biol.Chem., 286, 2011
5GIM
DownloadVisualize
BU of 5gim by Molmil
Crystal structure of thrombin-avathrin complex
Descriptor: C-terminal peptide from Putative uncharacterized protein avahiru, N-terminal peptide from Putative uncharacterized protein avahiru, Thrombin light chain, ...
Authors:Kini, R.M, Koh, C.Y, Iyer, J.K, Swaminathan, K.
Deposit date:2016-06-24
Release date:2017-05-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Avathrin: a novel thrombin inhibitor derived from a multicopy precursor in the salivary glands of the ixodid tick, Amblyomma variegatum.
FASEB J., 31, 2017
2NA7
DownloadVisualize
BU of 2na7 by Molmil
Transmembrane domain of human Fas/CD95 death receptor
Descriptor: Tumor necrosis factor receptor superfamily member 6
Authors:Fu, Q, Chou, J.J, Membrane Protein Structures by Solution NMR (MPSbyNMR)
Deposit date:2015-12-21
Release date:2016-01-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis and Functional Role of Intramembrane Trimerization of the Fas/CD95 Death Receptor.
Mol.Cell, 61, 2016
6VNB
DownloadVisualize
BU of 6vnb by Molmil
JAK2 JH1 in complex with BL2-084
Descriptor: (3S)-3-cyclopentyl-3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VNE
DownloadVisualize
BU of 6vne by Molmil
JAK2 JH1 in complex with Fedratinib
Descriptor: N-tert-butyl-3-{[5-methyl-2-({4-[2-(pyrrolidin-1-yl)ethoxy]phenyl}amino)pyrimidin-4-yl]amino}benzenesulfonamide, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VNC
DownloadVisualize
BU of 6vnc by Molmil
JAK2 JH1 in complex with BL2-096
Descriptor: (3R)-3-cyclopentyl-3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VNG
DownloadVisualize
BU of 6vng by Molmil
JAK2 JH1 in complex with PN2-118
Descriptor: N-{2-fluoro-5-[(2-{[3-fluoro-4-(1-methylpiperidin-4-yl)phenyl]amino}-5-methylpyrimidin-4-yl)amino]phenyl}-2-methylpropane-2-sulfonamide, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VNH
DownloadVisualize
BU of 6vnh by Molmil
JAK2 JH1 in complex with PN2-123
Descriptor: N-{5-[(2-{[3,5-difluoro-4-(1-methylpiperidin-4-yl)phenyl]amino}-5-methylpyrimidin-4-yl)amino]-2-fluorophenyl}-2-methylpropane-2-sulfonamide, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VNF
DownloadVisualize
BU of 6vnf by Molmil
JAK2 JH1 in complex with MA9-086
Descriptor: N~4~-[1-(tert-butylsulfonyl)-2,3-dihydro-1H-indol-6-yl]-N~2~-[3-fluoro-4-(1-methylpiperidin-4-yl)phenyl]-5-methylpyrimidine-2,4-diamine, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VN8
DownloadVisualize
BU of 6vn8 by Molmil
JAK2 JH1 in complex with baricitinib
Descriptor: Baricitinib, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VNJ
DownloadVisualize
BU of 6vnj by Molmil
JAK2 JH1 in complex with PN4-014
Descriptor: 3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-6,7-dihydro-5H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VNM
DownloadVisualize
BU of 6vnm by Molmil
JAK2 JH1 in complex with SY5-103
Descriptor: 4-[1-(but-3-en-1-yl)-1H-pyrazol-4-yl]-N-[4-(piperidin-4-yl)phenyl]-7H-pyrrolo[2,3-d]pyrimidin-2-amine, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021
6VNI
DownloadVisualize
BU of 6vni by Molmil
JAK2 JH1 in complex with PN3-115
Descriptor: 2-{5-[(2-{[3,5-difluoro-4-(1-methylpiperidin-4-yl)phenyl]amino}-5-methylpyrimidin-4-yl)amino]-2-fluorophenyl}-1lambda~6~,2-thiazolidine-1,1-dione, Tyrosine-protein kinase JAK2
Authors:Davis, R.R, Schonbrunn, E.
Deposit date:2020-01-29
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof.
J.Med.Chem., 64, 2021

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon