Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3SML
DownloadVisualize
BU of 3sml by Molmil
Crystal structure of human 14-3-3 sigma C38N/N166H in complex with TASK-3 peptide and stabilizer Fusicoccin A aglycone
Descriptor: 14-3-3 protein sigma, CHLORIDE ION, Fusicoccin A aglycone, ...
Authors:Anders, C, Schumacher, B, Ottmann, C.
Deposit date:2011-06-28
Release date:2012-07-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A semisynthetic fusicoccane stabilizes a protein-protein interaction and enhances the expression of K+ channels at the cell surface.
Chem. Biol., 20, 2013
3VMX
DownloadVisualize
BU of 3vmx by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel
Descriptor: Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
Deposit date:2011-12-19
Release date:2012-05-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The cytoplasmic coiled-coil mediates cooperative gating temperature sensitivity in the voltage-gated H(+) channel Hv1
Nat Commun, 3, 2012
3VIA
DownloadVisualize
BU of 3via by Molmil
Crystal structure of the PH domain of Evectin-2 from human
Descriptor: Pleckstrin homology domain-containing family B member 2
Authors:Okazaki, S, Kato, R, Wakatsuki, S.
Deposit date:2011-09-26
Release date:2012-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of the strict phospholipid binding specificity of the pleckstrin homology domain of human evectin-2
Acta Crystallogr.,Sect.D, 68, 2012
2D05
DownloadVisualize
BU of 2d05 by Molmil
Chitosanase From Bacillus circulans mutant K218P
Descriptor: Chitosanase, SULFATE ION
Authors:Fukamizo, T, Amano, S, Yamaguchi, K, Yoshikawa, T, Katsumi, T, Saito, J, Suzuki, M, Miki, K, Nagata, Y, Ando, A.
Deposit date:2005-07-25
Release date:2005-12-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacillus circulans MH-K1 Chitosanase: Amino Acid Residues Responsible for Substrate Binding
J.Biochem.(Tokyo), 138, 2005
2O06
DownloadVisualize
BU of 2o06 by Molmil
Human spermidine synthase
Descriptor: 1,4-DIAMINOBUTANE, 5'-DEOXY-5'-METHYLTHIOADENOSINE, MAGNESIUM ION, ...
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-27
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of spermidine synthases.
Biochemistry, 46, 2007
2O05
DownloadVisualize
BU of 2o05 by Molmil
Human spermidine synthase
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Spermidine synthase
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-27
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of spermidine synthases.
Biochemistry, 46, 2007
1RFP
DownloadVisualize
BU of 1rfp by Molmil
ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE AND CHARGED SIDE CHAINS
Descriptor: LYSOZYME
Authors:Motoshima, H, Ohmura, T, Ueda, T, Imoto, T.
Deposit date:1996-11-14
Release date:1997-05-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Analysis of the stabilization of hen lysozyme by helix macrodipole and charged side chain interaction.
J.Biochem.(Tokyo), 121, 1997
2O07
DownloadVisualize
BU of 2o07 by Molmil
Human spermidine synthase
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, SPERMIDINE, Spermidine synthase
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-27
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure and mechanism of spermidine synthases.
Biochemistry, 46, 2007
2O0L
DownloadVisualize
BU of 2o0l by Molmil
Human spermidine synthase
Descriptor: 5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINE, Spermidine synthase
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-27
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure and mechanism of spermidine synthases.
Biochemistry, 46, 2007
7KEY
DownloadVisualize
BU of 7key by Molmil
Protein Tyrosine Phosphatase 1B, Apo
Descriptor: ACETATE ION, MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Battaile, K.P, Chirgadze, Y, Ruzanov, M, Romanov, V, Lam, K, Gordon, R, Lin, A, Lam, R, Pai, E, Chirgadze, N.
Deposit date:2020-10-13
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.771 Å)
Cite:Signal transfer in human protein tyrosine phosphatase PTP1B from allosteric inhibitor P00058.
J.Biomol.Struct.Dyn., 2021
7KLX
DownloadVisualize
BU of 7klx by Molmil
Protein Tyrosine Phosphatase 1B with inhibitor
Descriptor: 2-(2,5-dimethyl-1H-pyrrol-1-yl)-5-hydroxybenzoic acid, MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Battaile, K.P, Chirgadze, Y, Ruzanov, M, Romanov, V, Lam, K, Gordon, R, Lin, A, Lam, R, Pai, E, Chirgadze, N.
Deposit date:2020-11-01
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:Signal transfer in human protein tyrosine phosphatase PTP1B from allosteric inhibitor P00058.
J.Biomol.Struct.Dyn., 2021
3TZ1
DownloadVisualize
BU of 3tz1 by Molmil
Crystal structure of the Ca2+-saturated C-terminal domain of Akazara scallop troponin C in complex with a troponin I fragment
Descriptor: CALCIUM ION, Troponin C, Troponin I
Authors:Yumoto, F, Kato, Y.S, Ohtsuki, I, Tanokura, M.
Deposit date:2011-09-26
Release date:2013-01-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Ca2+-saturated C-terminal domain of scallop troponin C in complex with a troponin I fragment
Biol.Chem., 394, 2012
5YIZ
DownloadVisualize
BU of 5yiz by Molmil
Mouse Cereblon thalidomide binding domain complexed with racemic thalidomide
Descriptor: Protein cereblon, S-Thalidomide, SULFATE ION, ...
Authors:Mori, T, Hakoshima, T.
Deposit date:2017-10-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of thalidomide enantiomer binding to cereblon
Sci Rep, 8, 2018
5GXH
DownloadVisualize
BU of 5gxh by Molmil
The structure of the Gemin5 WD40 domain with AAUUUUUG
Descriptor: GLYCEROL, Gem-associated protein 5, RNA (5'-R(*A*AP*UP*UP*UP*UP*UP*G)-3'), ...
Authors:Xu, C, He, H, Li, Y, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2016-09-17
Release date:2016-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into Gemin5-guided selection of pre-snRNAs for snRNP assembly
Genes Dev., 30, 2016
5YJ0
DownloadVisualize
BU of 5yj0 by Molmil
Mouse Cereblon thalidomide binding domain complexed with S-form thalidomide
Descriptor: Protein cereblon, S-Thalidomide, SULFATE ION, ...
Authors:Mori, T, Hakoshima, T.
Deposit date:2017-10-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of thalidomide enantiomer binding to cereblon
Sci Rep, 8, 2018
5GMH
DownloadVisualize
BU of 5gmh by Molmil
Crystal structure of monkey TLR7 in complex with R848
Descriptor: 1-[4-amino-2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-1-yl]-2-methylpropan-2-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2016-07-14
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA
Immunity, 45, 2016
3CC2
DownloadVisualize
BU of 3cc2 by Molmil
The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G.
Deposit date:2008-02-23
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mutations outside the anisomycin-binding site can make ribosomes drug-resistant.
J.Mol.Biol., 379, 2008
5GXI
DownloadVisualize
BU of 5gxi by Molmil
Structure of the Gemin5 WD40 domain in complex with AAUUUUUGAG
Descriptor: Gem-associated protein 5, RNA (5'-R(*A*AP*UP*UP*UP*UP*UP*GP*AP*G)-3'), UNKNOWN ATOM OR ION
Authors:Xu, C, He, H, Li, Y, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2016-09-18
Release date:2016-10-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insights into Gemin5-guided selection of pre-snRNAs for snRNP assembly
Genes Dev., 30, 2016
5YJ1
DownloadVisualize
BU of 5yj1 by Molmil
Mouse Cereblon thalidomide binding domain complexed with R-form thalidomide
Descriptor: 2-[(3~{R})-2,6-bis(oxidanylidene)piperidin-3-yl]isoindole-1,3-dione, Protein cereblon, SULFATE ION, ...
Authors:Mori, T, Hakoshima, T.
Deposit date:2017-10-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of thalidomide enantiomer binding to cereblon
Sci Rep, 8, 2018
5ZC9
DownloadVisualize
BU of 5zc9 by Molmil
Crystal structure of the human eIF4A1-ATP analog-RocA-polypurine RNA complex
Descriptor: (1R,2R,3S,3aR,8bS)-6,8-dimethoxy-3a-(4-methoxyphenyl)-N,N-dimethyl-1,8b-bis(oxidanyl)-3-phenyl-2,3-dihydro-1H-cyclopenta[b][1]benzofuran-2-carboxamide, Eukaryotic initiation factor 4A-I, MAGNESIUM ION, ...
Authors:Iwasaki, W, Takahashi, M, Sakamoto, A, Iwasaki, S, Ito, T.
Deposit date:2018-02-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Translation Inhibitor Rocaglamide Targets a Bimolecular Cavity between eIF4A and Polypurine RNA.
Mol. Cell, 73, 2019
7CEC
DownloadVisualize
BU of 7cec by Molmil
Structure of alpha6beta1 integrin in complex with laminin-511
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Arimori, T, Miyazaki, N, Takagi, J.
Deposit date:2020-06-22
Release date:2021-06-23
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural mechanism of laminin recognition by integrin.
Nat Commun, 12, 2021
7CEA
DownloadVisualize
BU of 7cea by Molmil
Crystal structure of HUTS-4 Fv-clasp fragment
Descriptor: HUTS-4 VH(S112C)-SARAH, HUTS-4 VL(C87Y)-SARAH(S37C)
Authors:Arimori, T, Takagi, J.
Deposit date:2020-06-22
Release date:2021-06-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural mechanism of laminin recognition by integrin.
Nat Commun, 12, 2021
7CEB
DownloadVisualize
BU of 7ceb by Molmil
Crystal structure of alpha6beta1 integrin headpiece
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Integrin alpha-6, ...
Authors:Arimori, T, Takagi, J.
Deposit date:2020-06-22
Release date:2021-06-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural mechanism of laminin recognition by integrin.
Nat Commun, 12, 2021
2RNN
DownloadVisualize
BU of 2rnn by Molmil
Solution Structure of the N-terminal SAP Domain of SUMO E3 Ligases from Saccharomyces cerevisiae
Descriptor: E3 SUMO-protein ligase SIZ1
Authors:Suzuki, R, Shindo, H, Tase, A, Yamazaki, T.
Deposit date:2008-01-30
Release date:2008-12-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures and DNA binding properties of the N-terminal SAP domains of SUMO E3 ligases from Saccharomyces cerevisiae and Oryza sativa.
Proteins, 75, 2009
2ROO
DownloadVisualize
BU of 2roo by Molmil
Solution structure of Magi4, a spider toxin from Macrothele gigas
Descriptor: Neurotoxin magi-4
Authors:Yamaji, N.
Deposit date:2008-04-04
Release date:2009-04-07
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Chemical synthesis and solution structure of a spider toxin that affects the inactivation of mammalian sodium channels
To be Published

227111

数据于2024-11-06公开中

PDB statisticsPDBj update infoContact PDBjnumon