Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6YJX
DownloadVisualize
BU of 6yjx by Molmil
Structure of Hen egg-white lysozyme crystallized with PAS polypeptide
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Schiefner, A, Skerra, A.
Deposit date:2020-04-05
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Proline/alanine-rich sequence (PAS) polypeptides as an alternative to PEG precipitants for protein crystallization.
Acta Crystallogr.,Sect.F, 76, 2020
7NH9
DownloadVisualize
BU of 7nh9 by Molmil
structure of the full-length CmaX protein
Descriptor: CmaX protein
Authors:Stetsenko, A, Stehantsev, P, Guskov, A.
Deposit date:2021-02-10
Release date:2021-07-07
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural and biochemical characterization of a novel ZntB (CmaX) transporter protein from Pseudomonas aeruginosa.
Int.J.Biol.Macromol., 184, 2021
1BXY
DownloadVisualize
BU of 1bxy by Molmil
CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L30 FROM THERMUS THERMOPHILUS AT 1.9 A RESOLUTION: CONFORMATIONAL FLEXIBILITY OF THE MOLECULE.
Descriptor: PROTEIN (RIBOSOMAL PROTEIN L30)
Authors:Fedorov, R, Nevskaya, N, Khairullina, A, Tishchenko, S, Mikhailov, A, Garber, M, Nikonov, S.
Deposit date:1998-10-09
Release date:1998-10-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of ribosomal protein L30 from Thermus thermophilus at 1.9 A resolution: conformational flexibility of the molecule.
Acta Crystallogr.,Sect.D, 55, 1999
6US6
DownloadVisualize
BU of 6us6 by Molmil
Artificial Iron Proteins: Modelling the Active Sites in Non-Heme Dioxygenases
Descriptor: ACETATE ION, Streptavidin, {N-(2-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}iron(3+)
Authors:Miller, K.R, Paretsky, J.D, Follmer, A.H, Heinisch, T, Mittra, K, Gul, S, Kim, I.-S, Fuller, F.D, Batyuk, A, Sutherlin, K.D, Brewster, A.S, Bhowmick, A, Sauter, N.K, Kern, J, Yano, J, Green, M.T, Ward, T.R, Borovik, A.S.
Deposit date:2019-10-24
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Artificial Iron Proteins: Modeling the Active Sites in Non-Heme Dioxygenases.
Inorg.Chem., 59, 2020
6J9M
DownloadVisualize
BU of 6j9m by Molmil
NmeBH+AcrIIC2
Descriptor: AcrIIC2, CRISPR-associated endonuclease Cas9
Authors:Zhu, Y.L, Gao, A, Serganov, A, Gao, P.
Deposit date:2019-01-23
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.394 Å)
Cite:Diverse Mechanisms of CRISPR-Cas9 Inhibition by Type IIC Anti-CRISPR Proteins.
Mol. Cell, 74, 2019
7N0U
DownloadVisualize
BU of 7n0u by Molmil
Complex of recombinant Bet v 1 with Fab fragment of REGN5713
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, REGN5713 Fab fragment heavy chain, REGN5713 Fab fragment light chain, ...
Authors:Franklin, M.C, Romero Hernandez, A.
Deposit date:2021-05-26
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Targeting immunodominant Bet v 1 epitopes with monoclonal antibodies prevents the birch allergic response.
J.Allergy Clin.Immunol., 149, 2022
7N0V
DownloadVisualize
BU of 7n0v by Molmil
Complex of recombinant Bet v 1 with Fab fragment of REGN5715
Descriptor: Major pollen allergen Bet v 1-A, REGN5715 Fab heavy chain, REGN5715 Fab light chain
Authors:Franklin, M.C, Romero Hernandez, A.
Deposit date:2021-05-26
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:Targeting immunodominant Bet v 1 epitopes with monoclonal antibodies prevents the birch allergic response.
J.Allergy Clin.Immunol., 149, 2022
1PBJ
DownloadVisualize
BU of 1pbj by Molmil
CBS domain protein
Descriptor: MAGNESIUM ION, hypothetical protein
Authors:Cuff, M.E, Skarina, T, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-05-14
Release date:2003-12-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of a hypothetical protein from M. thermautotrophicus reveals a novel fold and a pseudo 2-fold axis of symmetry
TO BE PUBLISHED
1PBT
DownloadVisualize
BU of 1pbt by Molmil
The crystal structure of TM1154, oxidoreductase, sol/devB family from Thermotoga maritima
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-phosphogluconolactonase, ...
Authors:Kim, Y, Joachimiak, A, Edwards, A, Skarina, T, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-05-15
Release date:2003-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure analysis of TM1154, oxidoreductase from Thermotoga maritima
To be Published
6YGW
DownloadVisualize
BU of 6ygw by Molmil
TGT W178F mutant labelled mit 5F-Trp crystallised at pH 5.5
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, GLYCEROL, ...
Authors:Nguyen, A, Heine, A, Klebe, G.
Deposit date:2020-03-27
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Mutation study on tRNA-guanine transglycosylase within 19F NMR experiments for conformational change analysis
To Be Published
6SBO
DownloadVisualize
BU of 6sbo by Molmil
Estrogen receptor mutant L536S
Descriptor: 6-(2,4-dichlorophenyl)-5-[4-[(3~{S})-1-(3-fluoranylpropyl)pyrrolidin-3-yl]oxyphenyl]-8,9-dihydro-7~{H}-benzo[7]annulene-2-carboxylic acid, Estrogen receptor
Authors:Vallee, F, Steier, V, Rak, A.
Deposit date:2019-07-22
Release date:2019-11-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Discovery of 6-(2,4-Dichlorophenyl)-5-[4-[(3S)-1-(3-fluoropropyl)pyrrolidin-3-yl]oxyphenyl]-8,9-dihydro-7H-benzo[7]annulene-2-carboxylic acid (SAR439859), a Potent and Selective Estrogen Receptor Degrader (SERD) for the Treatment of Estrogen-Receptor-Positive Breast Cancer.
J.Med.Chem., 63, 2020
6SCP
DownloadVisualize
BU of 6scp by Molmil
Cell Division Protein SepF in complex with C-terminal domain of FtsZ
Descriptor: Cell division protein SepF, ZINC ION
Authors:Sogues, A, Wehenkel, A.M, Alzari, P.M.
Deposit date:2019-07-25
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Essential dynamic interdependence of FtsZ and SepF for Z-ring and septum formation in Corynebacterium glutamicum.
Nat Commun, 11, 2020
6YGV
DownloadVisualize
BU of 6ygv by Molmil
tRNA-Guanine Transglycosylase (TGT) in co-crystallized complex with (E)-N-ethyl-4-oxo-4-phenylbut-2-enamide
Descriptor: GLYCEROL, Queuine tRNA-ribosyltransferase, ZINC ION, ...
Authors:Nguyen, A, Heyder, L, Heine, A, Diederich, W, Klebe, G.
Deposit date:2020-03-27
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Ligands disturb dimer contacts
To Be Published
6UX3
DownloadVisualize
BU of 6ux3 by Molmil
Crystal structure of acetoin dehydrogenase from Enterobacter cloacae
Descriptor: Acetoin dehydrogenase, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Chang, C, Skarina, T, Mesa, N, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-11-06
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Crystal structure of acetoin dehydrogenase from Enterobacter cloacae
To Be Published
6YNY
DownloadVisualize
BU of 6yny by Molmil
Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - F1Fo composite dimer model
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Kock Flygaard, R, Muhleip, A, Amunts, A.
Deposit date:2020-04-14
Release date:2020-09-30
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization.
Nat Commun, 11, 2020
6GZO
DownloadVisualize
BU of 6gzo by Molmil
Crystal structure of NadR protein in complex with NAD and AMP-PNP
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Nicotinamide-nucleotide adenylyltransferase NadR family / Ribosylnicotinamide kinase, PHOSPHATE ION, ...
Authors:Singh, R, Stetsenko, A, Jaehme, M, Guskov, A, Slotboom, D.J.
Deposit date:2018-07-04
Release date:2019-07-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Functional Characterization of NadR fromLactococcus lactis.
Molecules, 25, 2020
6UVZ
DownloadVisualize
BU of 6uvz by Molmil
Amidohydrolase 2 from Bifidobacterium longum subsp. infantis
Descriptor: Amidohydrolase 2, CITRIC ACID, NONAETHYLENE GLYCOL
Authors:Chang, C, Xu, X, Cui, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2019-11-04
Release date:2020-02-26
Method:X-RAY DIFFRACTION (2.898 Å)
Cite:Amidohydrolase 2 from Bifidobacterium longum subsp. infantis
To Be Published
1X9B
DownloadVisualize
BU of 1x9b by Molmil
Solution NMR Structure of Protein Ta0354 from Thermoplasma acidophilum. Ontario Center for Structural Proteomics target TA0354_69_121; Northeast Structural Genomics Consortium Target TaT38.
Descriptor: hypothetical membrane protein ta0354_69_121
Authors:Wu, B, Yee, A, Huang, Y.J, Ramelot, T.A, Semesi, A, Lemak, A, Edward, A, Kennedy, M, Montelione, G.T, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2004-08-20
Release date:2004-12-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of hypothetical membrane protein ta0354_69_121 from Thermoplasma acidophilum
To be Published
6Y2K
DownloadVisualize
BU of 6y2k by Molmil
Crystal structure of beta-galactosidase from the psychrophilic Marinomonas ef1
Descriptor: CHLORIDE ION, GLYCEROL, beta-galactosidase
Authors:Mangiagalli, M, Lapi, M, Maione, S, Orlando, M, Brocca, S, Pesce, A, Barbiroli, A, Pucciarelli, S, Camilloni, C, Lotti, M.
Deposit date:2020-02-16
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The co-existence of cold activity and thermal stability in an Antarctic GH42 beta-galactosidase relies on its hexameric quaternary arrangement.
Febs J., 288, 2021
4ZVZ
DownloadVisualize
BU of 4zvz by Molmil
Co-crystal structures of PP5 in complex with 5-methyl-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic acid
Descriptor: (1R,2S,3R,4S,5S)-5-(propoxymethyl)-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic acid, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
Authors:Chattopadhyay, D, Swingle, M.R, Salter, E.A, Wierzbicki, A, Honkanen, R.E.
Deposit date:2015-05-18
Release date:2016-04-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures and mutagenesis of PPP-family ser/thr protein phosphatases elucidate the selectivity of cantharidin and novel norcantharidin-based inhibitors of PP5C.
Biochem. Pharmacol., 109, 2016
1NKW
DownloadVisualize
BU of 1nkw by Molmil
Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ...
Authors:Harms, J.M, Schluenzen, F, Zarivach, R, Bashan, A, Gat, S, Agmon, I, Bartels, H, Franceschi, F, Yonath, A.
Deposit date:2003-01-05
Release date:2003-02-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:High resolution structure of the large ribosomal subunit from a mesophilic eubacterium
Cell(Cambridge,Mass.), 107, 2001
6YAN
DownloadVisualize
BU of 6yan by Molmil
Mammalian 48S late-stage translation initiation complex with histone 4 mRNA
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S12, 40S ribosomal protein S21, ...
Authors:Bochler, A, Simonetti, A, Guca, E, Hashem, Y.
Deposit date:2020-03-12
Release date:2020-04-08
Last modified:2020-04-22
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structural Insights into the Mammalian Late-Stage Initiation Complexes.
Cell Rep, 31, 2020
6H1B
DownloadVisualize
BU of 6h1b by Molmil
Structure of amide bond synthetase Mcba K483A mutant from Marinactinospora thermotolerans
Descriptor: 1-ethanoyl-9~{H}-pyrido[3,4-b]indole-3-carboxylic acid, ADENOSINE MONOPHOSPHATE, Fatty acid CoA ligase
Authors:Rowlinson, B, Petchey, M, Cuetos, A, Frese, A, Dannevald, S, Grogan, G.
Deposit date:2018-07-11
Release date:2018-09-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Broad Aryl Acid Specificity of the Amide Bond Synthetase McbA Suggests Potential for the Biocatalytic Synthesis of Amides.
Angew. Chem. Int. Ed. Engl., 57, 2018
6YGP
DownloadVisualize
BU of 6ygp by Molmil
TGT WT labelled mit 5F-Trp crystallised at pH 5.5
Descriptor: CHLORIDE ION, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
Authors:Nguyen, A, Heine, A, Klebe, G.
Deposit date:2020-03-27
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Mutation study on tRNA-guanine transglycosylase within 19F NMR experiments for conformational change analysis
To Be Published
6SAT
DownloadVisualize
BU of 6sat by Molmil
Cell Division Protein SepF in complex with C-terminal domain of FtsZ
Descriptor: Cell division protein FtsZ, Cell division protein SepF
Authors:Sogues, A, Wehenkel, A.M, Alzari, P.M.
Deposit date:2019-07-17
Release date:2020-03-11
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Essential dynamic interdependence of FtsZ and SepF for Z-ring and septum formation in Corynebacterium glutamicum.
Nat Commun, 11, 2020

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon