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7VYR
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BU of 7vyr by Molmil
Crystal structure of SARS-CoV-2 Spike RBD in complex with the D27 neutralizing antibody Fab fragment
Descriptor: D27 heavy chain, D27 light chain, Spike protein S1
Authors:Jeong, B.-S, Oh, B.-H.
Deposit date:2021-11-15
Release date:2022-03-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Computational design of a neutralizing antibody with picomolar binding affinity for all concerning SARS-CoV-2 variants.
Mabs, 14, 2022
7XGF
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BU of 7xgf by Molmil
Crystal structure of BCL-xL in complex with computationally designed inhibitor protein
Descriptor: BCL-xL, BCL-xL and MCL-1 dual inhibitor 2
Authors:Oh, B.-H, Kim, S.
Deposit date:2022-04-04
Release date:2022-07-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Computational design of an apoptogenic protein that binds BCL-xL and MCL-1 simultaneously and potently.
Comput Struct Biotechnol J, 20, 2022
7XGG
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BU of 7xgg by Molmil
Crystal structure of BCL-xL in complex with computationally designed inhibitor protein
Descriptor: BCL-xL and MCL-1 dual inhibitor, Bcl-2-like protein 1
Authors:Oh, B.-H, Kim, S.
Deposit date:2022-04-04
Release date:2022-07-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Computational design of an apoptogenic protein that binds BCL-xL and MCL-1 simultaneously and potently.
Comput Struct Biotechnol J, 20, 2022
7XGE
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BU of 7xge by Molmil
Crystal structure of MCL-1 in complex with computationally designed inhibitor protein
Descriptor: BCL-xL and MCL-1 dual binder 2, Induced myeloid leukemia cell differentiation protein Mcl-1
Authors:Oh, B.-H, Kim, S.
Deposit date:2022-04-04
Release date:2022-07-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Computational design of an apoptogenic protein that binds BCL-xL and MCL-1 simultaneously and potently.
Comput Struct Biotechnol J, 20, 2022
4TSV
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BU of 4tsv by Molmil
HIGH RESOLUTION CRYSTAL STRUCTURE OF A HUMAN TNF-ALPHA MUTANT
Descriptor: TUMOR NECROSIS FACTOR-ALPHA
Authors:Cha, S.-S, Kim, J.-S, Cho, H.-S, Oh, B.-H.
Deposit date:1997-10-29
Release date:1998-12-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High resolution crystal structure of a human tumor necrosis factor-alpha mutant with low systemic toxicity.
J.Biol.Chem., 273, 1998
1QLG
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BU of 1qlg by Molmil
Crystal structure of phytase with magnesium from Bacillus amyloliquefaciens
Descriptor: 3-PHYTASE, CALCIUM ION, MAGNESIUM ION
Authors:Shin, S, Ha, N.-C, Oh, B.-H.
Deposit date:1999-08-31
Release date:2000-02-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of a Novel, Thermostable Phytase in Partially and Fully Calcium-Loaded States
Nat.Struct.Biol., 7, 2000
5TSW
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BU of 5tsw by Molmil
HIGH RESOLUTION CRYSTAL STRUCTURE OF A HUMAN TNF-ALPHA MUTANT
Descriptor: PROTEIN (TUMOR NECROSIS FACTOR-ALPHA)
Authors:Cha, S.-S, Kim, J.-S, Cho, H.-S, Oh, B.-H.
Deposit date:1999-04-22
Release date:1999-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High resolution crystal structure of a human tumor necrosis factor-alpha mutant with low systemic toxicity.
J.Biol.Chem., 273, 1998
4AP9
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BU of 4ap9 by Molmil
Crystal structure of phosphoserine phosphatase from T. onnurineus in complex with NDSB-201
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, PHOSPHOSERINE PHOSPHATASE
Authors:Jung, T.-Y, Kim, Y.-S, Song, H.-N, Woo, E.
Deposit date:2012-03-31
Release date:2012-12-26
Last modified:2013-04-17
Method:X-RAY DIFFRACTION (1.783 Å)
Cite:Identification of a Novel Ligand Binding Site in Phosphoserine Phosphatase from the Hyperthermophilic Archaeon Thermococcus Onnurineus.
Proteins, 81, 2013
4AEE
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BU of 4aee by Molmil
CRYSTAL STRUCTURE OF MALTOGENIC AMYLASE FROM S.MARINUS
Descriptor: ALPHA AMYLASE, CATALYTIC REGION
Authors:Jung, T.Y, Park, C.H, Yoon, S.M, Park, S.H, Park, K.H, Woo, E.J.
Deposit date:2012-01-10
Release date:2012-01-18
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Association of Novel Domain in Active Site of Archaic Hyperthermophilic Maltogenic Amylase from Staphylothermus Marinus.
J.Biol.Chem., 287, 2012
4B6J
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BU of 4b6j by Molmil
Crystal structure of phosphoserine phosphatase from T. onnurineus
Descriptor: PHOSPHOSERINE PHOSPHATASE
Authors:Jung, T.-Y, Kim, Y.-S, Song, H.-N, Woo, E.
Deposit date:2012-08-14
Release date:2012-12-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Identification of a Novel Ligand Binding Site in Phosphoserine Phosphatase from the Hyperthermophilic Archaeon Thermococcus Onnurineus.
Proteins, 81, 2013
4N7Z
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BU of 4n7z by Molmil
Crystal structure of human Plk4 cryptic polo box (CPB) in complex with a Cep192 N-terminal fragment
Descriptor: Centrosomal protein of 192 kDa, Serine/threonine-protein kinase PLK4
Authors:Park, S.-Y, Park, J.-E, Tian, L, Kim, T.-S, Yang, W, Lee, K.S.
Deposit date:2013-10-16
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
4N9J
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BU of 4n9j by Molmil
Crystal structure of the cryptic polo box domain of human Plk4
Descriptor: CHLORIDE ION, SULFATE ION, Serine/threonine-protein kinase PLK4
Authors:Ku, B, Kim, J.H, Lee, K.S, Kim, S.J.
Deposit date:2013-10-21
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
4N7V
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BU of 4n7v by Molmil
Crystal structure of human Plk4 cryptic polo box (CPB) in complex with a Cep152 N-terminal fragment
Descriptor: Centrosomal protein of 152 kDa, Serine/threonine-protein kinase PLK4
Authors:Park, S.-Y, Park, J.-E, Tian, L, Kim, T.-S, Yang, W, Lee, K.S.
Deposit date:2013-10-16
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.758 Å)
Cite:Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
1D2Q
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BU of 1d2q by Molmil
CRYSTAL STRUCTURE OF HUMAN TRAIL
Descriptor: TNF-RELATED APOPTOSIS INDUCING LIGAND
Authors:Cha, S.-S.
Deposit date:1999-09-27
Release date:2000-02-11
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:2.8 A resolution crystal structure of human TRAIL, a cytokine with selective antitumor activity.
Immunity, 11, 1999
6A8J
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BU of 6a8j by Molmil
Crystal structure of bacterial protein toxins
Descriptor: GLYCEROL, RTX toxin, SULFATE ION
Authors:Kim, M.H, Hwang, J, Jang, S.Y.
Deposit date:2018-07-09
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.711 Å)
Cite:Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
6AJO
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BU of 6ajo by Molmil
Complex form of Uracil DNA glycosylase X and uracil-DNA.
Descriptor: DNA (5'-D(P*(ORP)P*TP*T)-3'), IRON/SULFUR CLUSTER, PHOSPHATE ION, ...
Authors:Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
Deposit date:2018-08-28
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.269 Å)
Cite:Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6AJP
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BU of 6ajp by Molmil
Complex form of Uracil DNA glycosylase X and deoxyuridine monophosphate.
Descriptor: 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
Authors:Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
Deposit date:2018-08-28
Release date:2019-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.334 Å)
Cite:Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6AJQ
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BU of 6ajq by Molmil
E52Q mutant form of Uracil DNA glycosylase X from Mycobacterium smegmatis.
Descriptor: IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
Authors:Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
Deposit date:2018-08-28
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.342 Å)
Cite:Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6AJS
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BU of 6ajs by Molmil
H109S mutant form of Uracil DNA glycosylase X.
Descriptor: IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
Authors:Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
Deposit date:2018-08-28
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.632 Å)
Cite:Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6IWD
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BU of 6iwd by Molmil
The PTP domain of human PTPN14 in a complex with the CR3 domain of HPV18 E7
Descriptor: CHLORIDE ION, HPV18 E7, PHOSPHATE ION, ...
Authors:Yun, H.-Y, Kim, S.J, Ku, B.
Deposit date:2018-12-05
Release date:2019-07-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for recognition of the tumor suppressor protein PTPN14 by the oncoprotein E7 of human papillomavirus.
Plos Biol., 17, 2019
4HVZ
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BU of 4hvz by Molmil
Crystal structure of brucella abortus immunogenic BP26 protein
Descriptor: 26 kDa periplasmic immunogenic protein
Authors:Kim, D, Park, J, Oh, B, Song, J.
Deposit date:2012-11-07
Release date:2013-01-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Brucella Immunogenic BP26 Forms a Channel-like Structure.
J.Mol.Biol., 425, 2013
2B9L
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BU of 2b9l by Molmil
Crystal structure of prophenoloxidase activating factor-II from the beetle Holotrichia diomphalia
Descriptor: CALCIUM ION, SULFATE ION, alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Piao, S, Song, Y.-L, Park, S.Y, Lee, B.L, Oh, B.-H, Ha, N.-C.
Deposit date:2005-10-12
Release date:2006-01-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a clip-domain serine protease and functional roles of the clip domains.
Embo J., 24, 2005
1OPY
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BU of 1opy by Molmil
KSI
Descriptor: DELTA5-3-KETOSTEROID IOSMERASE
Authors:Kim, S.-W, Cha, S.-S, Cho, H.-S, Kim, J.-S, Ha, N.-C, Cho, M.-J, Choi, K.-Y, Oh, B.-H.
Deposit date:1997-05-23
Release date:1998-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution crystal structures of delta5-3-ketosteroid isomerase with and without a reaction intermediate analogue.
Biochemistry, 36, 1997
5Z59
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BU of 5z59 by Molmil
Crystal structure of Tk-PTP in the inactive form
Descriptor: Protein-tyrosine phosphatase
Authors:Ku, B, Yun, H.Y, Kim, S.J.
Deposit date:2018-01-17
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
5Z5B
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BU of 5z5b by Molmil
Crystal structure of Tk-PTP in the G95A mutant form
Descriptor: CHLORIDE ION, FORMIC ACID, Protein-tyrosine phosphatase
Authors:Ku, B, Yun, H.Y, Kim, S.J.
Deposit date:2018-01-17
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018

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