Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4KI7
DownloadVisualize
BU of 4ki7 by Molmil
Design and structural analysis of aromatic inhibitors of type II dehydroquinase from Mycobacterium tuberculosis - compound 41c [3-hydroxy-5-(3-nitrophenoxy)benzoic acid]
Descriptor: 3-dehydroquinate dehydratase, 3-hydroxy-5-(3-nitrophenoxy)benzoic acid
Authors:Dias, M.V.B, Howard, N.G, Blundell, T.L, Abell, C.
Deposit date:2013-05-01
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Design and Structural Analysis of Aromatic Inhibitors of Type II Dehydroquinase from Mycobacterium tuberculosis.
Chemmedchem, 10, 2015
4KIJ
DownloadVisualize
BU of 4kij by Molmil
Design and structural analysis of aromatic inhibitors of type II dehydroquinase dehydratase from Mycobacterium tuberculosis - compound 35c [3,4-dihydroxy-5-(3-nitrophenoxy)benzoic acid]
Descriptor: 3,4-dihydroxy-5-(3-nitrophenoxy)benzoic acid, 3-dehydroquinate dehydratase, CHLORIDE ION
Authors:Dias, M.V.B, Howard, N.G, Blundell, T.L, Abell, C.
Deposit date:2013-05-02
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Design and Structural Analysis of Aromatic Inhibitors of Type II Dehydroquinase from Mycobacterium tuberculosis.
Chemmedchem, 10, 2015
4K24
DownloadVisualize
BU of 4k24 by Molmil
Structure of anti-uPAR Fab ATN-658 in complex with uPAR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Urokinase plasminogen activator surface receptor, ...
Authors:Huang, M.D, Xu, X, Yuan, C.
Deposit date:2013-04-08
Release date:2014-02-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Identification of a New Epitope in uPAR as a Target for the Cancer Therapeutic Monoclonal Antibody ATN-658, a Structural Homolog of the uPAR Binding Integrin CD11b ( alpha M)
Plos One, 9, 2014
4KIW
DownloadVisualize
BU of 4kiw by Molmil
Design and structural analysis of aromatic inhibitors of type II dehydroquinate dehydratase from Mycobacterium tuberculosis - compound 49e [5-[(3-nitrobenzyl)amino]benzene-1,3-dicarboxylic acid]
Descriptor: 3-dehydroquinate dehydratase, 5-[(3-nitrobenzyl)amino]benzene-1,3-dicarboxylic acid
Authors:Dias, M.V.B, Howard, N.G, Blundell, T.L, Abell, C.
Deposit date:2013-05-02
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Design and Structural Analysis of Aromatic Inhibitors of Type II Dehydroquinase from Mycobacterium tuberculosis.
Chemmedchem, 10, 2015
4KIU
DownloadVisualize
BU of 4kiu by Molmil
Design and structural analysis of aromatic inhibitors of type II dehydroquinate dehydratase from Mycobacterium tuberculosis - compound 49d [5-[(3-nitrobenzyl)oxy]benzene-1,3-dicarboxylic acid]
Descriptor: 3-dehydroquinate dehydratase, 5-[(3-nitrobenzyl)oxy]benzene-1,3-dicarboxylic acid
Authors:Dias, M.V.B, Howard, N.G, Blundell, T.L, Abell, C.
Deposit date:2013-05-02
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design and Structural Analysis of Aromatic Inhibitors of Type II Dehydroquinase from Mycobacterium tuberculosis.
Chemmedchem, 10, 2015
4KQE
DownloadVisualize
BU of 4kqe by Molmil
The mutant structure of the human glycyl-tRNA synthetase E71G
Descriptor: GLYCEROL, Glycine--tRNA ligase
Authors:Qin, X, Hao, Z, Tian, Q, Zhang, Z, Zhou, C, Xie, W.
Deposit date:2013-05-15
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.739 Å)
Cite:Large Conformational Changes of Insertion 3 in Human Glycyl-tRNA Synthetase (hGlyRS) during Catalysis
J.Biol.Chem., 291, 2016
4I5S
DownloadVisualize
BU of 4i5s by Molmil
Structure and function of sensor histidine kinase
Descriptor: Putative histidine kinase CovS; VicK-like protein
Authors:Cai, Y.
Deposit date:2012-11-28
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mechanistic insights revealed by the crystal structure of a histidine kinase with signal transducer and sensor domains
Plos Biol., 11, 2013
6JPJ
DownloadVisualize
BU of 6jpj by Molmil
Crystal structure of FGF401 in complex of FGFR4
Descriptor: Fibroblast growth factor receptor 4, N-[5-cyano-4-(2-methoxyethylamino)pyridin-2-yl]-7-methanoyl-6-[(4-methyl-2-oxidanylidene-piperazin-1-yl)methyl]-3,4-dihydro-2H-1,8-naphthyridine-1-carboxamide, SULFATE ION
Authors:Zhou, Z, Chen, X, Chen, Y.
Deposit date:2019-03-27
Release date:2019-05-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.638 Å)
Cite:Characterization of FGF401 as a reversible covalent inhibitor of fibroblast growth factor receptor 4.
Chem.Commun.(Camb.), 55, 2019
9I8I
DownloadVisualize
BU of 9i8i by Molmil
cryoEM structure of HIV-1 KAKA/G225R mature CA hexamer
Descriptor: HIV-1 KAKA/G225R CA hexamer
Authors:Zhu, Y, Shen, J, Shen, Y, Xu, J, Zhang, P.
Deposit date:2025-02-05
Release date:2025-02-26
Last modified:2025-03-05
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Structural basis for HIV-1 capsid adaption to rescue IP6-packaging deficiency.
Biorxiv, 2025
9IZW
DownloadVisualize
BU of 9izw by Molmil
Cryo-EM structure of ALDH6A1-S262Y
Descriptor: Methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial
Authors:Su, G, Xu, Y, Luan, X.
Deposit date:2024-08-01
Release date:2024-11-27
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural and biochemical basis for the pathogenic mutations of methylmalonate semialdehyde dehydrogenase ALDH6A1
Medicine Plus, 1, 2024
9IZV
DownloadVisualize
BU of 9izv by Molmil
Cryo-EM structure of ALDH6A1-Y172H & R535C
Descriptor: Methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial
Authors:Su, G, Xu, Y, Luan, X.
Deposit date:2024-08-01
Release date:2024-11-27
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structural and biochemical basis for the pathogenic mutations of methylmalonate semialdehyde dehydrogenase ALDH6A1
Medicine Plus, 1, 2024
9IZU
DownloadVisualize
BU of 9izu by Molmil
Cryo-EM structure of ALDH6A1-P62S
Descriptor: Methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial
Authors:Su, G, Xu, Y, Luan, X.
Deposit date:2024-08-01
Release date:2024-11-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural and biochemical basis for the pathogenic mutations of methylmalonate semialdehyde dehydrogenase ALDH6A1
Medicine Plus, 1, 2024
9IZX
DownloadVisualize
BU of 9izx by Molmil
Cryo-EM structure of ALDH6A1-G446R
Descriptor: Methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial
Authors:Su, G, Xu, Y, Luan, X.
Deposit date:2024-08-01
Release date:2024-11-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural and biochemical basis for the pathogenic mutations of methylmalonate semialdehyde dehydrogenase ALDH6A1
Medicine Plus, 1, 2024
4OFC
DownloadVisualize
BU of 4ofc by Molmil
2.0 Angstroms X-ray crystal structure of human 2-amino-3-carboxymuconate-6-semialdehye decarboxylase
Descriptor: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, ZINC ION
Authors:Huo, L, Liu, F, Iwaki, H, Chen, L, Hasegawa, Y, Liu, A.
Deposit date:2014-01-14
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Human alpha-amino-beta-carboxymuconate-epsilon-semialdehyde decarboxylase (ACMSD): A structural and mechanistic unveiling.
Proteins, 83, 2015
2M0Q
DownloadVisualize
BU of 2m0q by Molmil
Solution NMR analysis of intact KCNE2 in detergent micelles demonstrate a straight transmembrane helix
Descriptor: Potassium voltage-gated channel subfamily E member 2
Authors:Lai, C, Li, P, Chen, L, Zhang, L, Wu, F, Tian, C.
Deposit date:2012-11-01
Release date:2014-04-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Differential modulations of KCNQ1 by auxiliary proteins KCNE1 and KCNE2.
Sci Rep, 4, 2014
6KNZ
DownloadVisualize
BU of 6knz by Molmil
Crystal structure of T2R-TTL-KXO1 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[5-[4-(2-morpholin-4-ylethoxy)phenyl]pyridin-2-yl]-~{N}-(phenylmethyl)ethanamide, CALCIUM ION, ...
Authors:Chen, Q, Yu, Y.
Deposit date:2019-08-07
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.475 Å)
Cite:Reversible binding of the anticancer drug KXO1 (tirbanibulin) to the colchicine-binding site of beta-tubulin explains KXO1's low clinical toxicity.
J.Biol.Chem., 294, 2019
6K9V
DownloadVisualize
BU of 6k9v by Molmil
Crystal structure of tubulin in complex with inhibitor D64
Descriptor: (5-methoxy-1H-indol-2-yl)-phenyl-methanone, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Yu, Y, Chen, Q.
Deposit date:2019-06-18
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.543 Å)
Cite:Structural insights into the design of indole derivatives as tubulin polymerization inhibitors.
Febs Lett., 594, 2020
1JJG
DownloadVisualize
BU of 1jjg by Molmil
Solution Structure of Myxoma Virus Protein M156R
Descriptor: M156R
Authors:Ramelot, T.A, Cort, J.R, Yee, A.A, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2001-07-05
Release date:2002-03-06
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Myxoma virus immunomodulatory protein M156R is a structural mimic of eukaryotic translation initiation factor eIF2alpha.
J.Mol.Biol., 322, 2002
5ZK1
DownloadVisualize
BU of 5zk1 by Molmil
Crystal Structure of the CRTC2(SeMet)-CREB-CRE complex
Descriptor: CREB-regulated transcription coactivator 2, Cyclic AMP-responsive element-binding protein 1, DNA (5'-D(*CP*TP*TP*GP*GP*CP*TP*GP*AP*CP*GP*TP*CP*AP*GP*CP*CP*AP*AP*G)-3'), ...
Authors:Xiang, S, Zhai, L, Valencia-Swain, J.
Deposit date:2018-03-22
Release date:2018-06-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural Insights into the CRTC2-CREB Complex Assembly on CRE.
J. Mol. Biol., 430, 2018
5ZKO
DownloadVisualize
BU of 5zko by Molmil
Crystal structure of the CRTC2-CREB-CRE complex
Descriptor: CREB-regulated transcription coactivator 2, Cyclic AMP-responsive element-binding protein 1, DNA (5'-D(*CP*TP*TP*GP*GP*CP*TP*GP*AP*CP*GP*TP*CP*AP*GP*CP*CP*AP*AP*G)-3')
Authors:Xiang, S, Zhai, L, Valecia-Swain, J.
Deposit date:2018-03-24
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural Insights into the CRTC2-CREB Complex Assembly on CRE.
J. Mol. Biol., 430, 2018
7XPJ
DownloadVisualize
BU of 7xpj by Molmil
crystal structure of rice ASI1 BAH domain
Descriptor: BAH domain-containing protein
Authors:Yuan, J, Du, J.
Deposit date:2022-05-04
Release date:2023-01-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants.
Proc.Natl.Acad.Sci.USA, 120, 2023
7XPK
DownloadVisualize
BU of 7xpk by Molmil
crystal structure of rice ASI1 BAH domain in complex with a rice SUVH6 peptide
Descriptor: Alpha-aminoacylpeptide hydrolase, BAH domain-containing protein
Authors:Yuan, J, Du, J.
Deposit date:2022-05-04
Release date:2023-01-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants.
Proc.Natl.Acad.Sci.USA, 120, 2023
8IW5
DownloadVisualize
BU of 8iw5 by Molmil
Crystal structure of liprin-beta H2H3 dimer
Descriptor: CALCIUM ION, Liprin-beta-1
Authors:Zhang, J, Chen, S, Wei, Z.
Deposit date:2023-03-29
Release date:2023-11-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023
8IW0
DownloadVisualize
BU of 8iw0 by Molmil
Crystal structure of the KANK1/liprin-beta1 complex
Descriptor: Liprin-beta-1,KN motif and ankyrin repeat domain-containing protein 1
Authors:Zhang, J, Chen, S, Wei, Z, Yu, C.
Deposit date:2023-03-29
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023
5YOV
DownloadVisualize
BU of 5yov by Molmil
Crystal structure of BRD4-BD1 bound with hjp126
Descriptor: (3~{R})-4-cyclopentyl-~{N}-(2,4-dimethylphenyl)-1,3-dimethyl-2-oxidanylidene-3~{H}-quinoxaline-6-carboxamide, Bromodomain-containing protein 4
Authors:Xiong, B, Hu, J, Li, Y, Cao, D.
Deposit date:2017-10-31
Release date:2018-11-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Structure-based optimization of a series of selective BET inhibitors containing aniline or indoline groups.
Eur.J.Med.Chem., 150, 2018

238582

건을2025-07-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon