Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4UIS
DownloadVisualize
BU of 4uis by Molmil
The cryoEM structure of human gamma-Secretase complex
Descriptor: GAMMA-SECRETASE, LYSOZYME
Authors:Sun, L, Zhao, L, Yang, G, Yan, C, Zhou, R, Zhou, X, Xie, T, Zhao, Y, Wu, S, Li, X, Shi, Y.
Deposit date:2015-04-03
Release date:2015-06-10
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural Basis of Human Gamma-Secretase Assembly.
Proc.Natl.Acad.Sci.USA, 112, 2015
8BO2
DownloadVisualize
BU of 8bo2 by Molmil
BAM-EspP complex structure with BamA-S425C/EspP-S1299C mutations in nanodisc
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Shen, C, Chang, S, Luo, Q, Zhang, Z, Xie, T, Luo, B, Lu, G, Zhu, X, Wei, X, Dong, C, Zhou, R, Zhang, X, Tang, X, Dong, H.
Deposit date:2022-11-14
Release date:2023-04-26
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of BAM-mediated outer membrane beta-barrel protein assembly.
Nature, 617, 2023
8BNZ
DownloadVisualize
BU of 8bnz by Molmil
BAM-EspP complex structure with BamA-G431C/EspP-N1293C mutations in nanodisc
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Shen, C, Chang, S, Luo, Q, Zhang, Z, Xie, T, Luo, B, Lu, G, Zhu, X, Wei, X, Dong, C, Zhou, R, Zhang, X, Tang, X, Dong, H.
Deposit date:2022-11-14
Release date:2023-04-26
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of BAM-mediated outer membrane beta-barrel protein assembly.
Nature, 617, 2023
4YVU
DownloadVisualize
BU of 4yvu by Molmil
Crystal structure of CotA native enzyme in the acid condition, PH5.6
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, GLYCEROL, ...
Authors:Liu, Z.C, Xie, T, Wang, G.G.
Deposit date:2015-03-20
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of CotA laccase complexed with 2,2-azinobis-(3-ethylbenzothiazoline-6-sulfonate) at a novel binding site
Acta Crystallogr.,Sect.F, 72, 2016
4YVN
DownloadVisualize
BU of 4yvn by Molmil
Crystal structure of CotA laccase complexed with ABTS at a novel binding site
Descriptor: 1,2-ETHANEDIOL, 3-ETHYL-2-[(2Z)-2-(3-ETHYL-6-SULFO-1,3-BENZOTHIAZOL-2(3H)-YLIDENE)HYDRAZINO]-6-SULFO-3H-1,3-BENZOTHIAZOL-1-IUM, COPPER (II) ION, ...
Authors:Liu, Z.C, Xie, T, Wang, G.G.
Deposit date:2015-03-20
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of CotA laccase complexed with 2,2-azinobis-(3-ethylbenzothiazoline-6-sulfonate) at a novel binding site
Acta Crystallogr.,Sect.F, 72, 2016
7Y8C
DownloadVisualize
BU of 7y8c by Molmil
Crystal structure of CotA laccase complexed with syringaldehyde
Descriptor: 3,5-dimethoxy-4-oxidanyl-benzaldehyde, COPPER (II) ION, Spore coat protein A, ...
Authors:Liu, Z.C, Xie, T, Wang, G.G.
Deposit date:2022-06-23
Release date:2023-06-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular insights into substrate promiscuity of CotA laccase catalyzing lignin-phenol derivatives.
Int.J.Biol.Macromol., 256, 2023
7Y8B
DownloadVisualize
BU of 7y8b by Molmil
Crystal structure of CotA laccase complexed with syringic acid
Descriptor: 3,5-dimethoxy-4-oxidanyl-benzoic acid, COPPER (II) ION, Spore coat protein A, ...
Authors:Liu, Z.C, Xie, T, Wang, G.G.
Deposit date:2022-06-23
Release date:2023-06-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular insights into substrate promiscuity of CotA laccase catalyzing lignin-phenol derivatives.
Int.J.Biol.Macromol., 256, 2023
2KHS
DownloadVisualize
BU of 2khs by Molmil
Solution structure of SNase121:SNase(111-143) complex
Descriptor: Nuclease, Thermonuclease
Authors:Geng, Y, Feng, Y, Xie, T, Shan, L, Wang, J.
Deposit date:2009-04-10
Release date:2009-10-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The native-like interactions between SNase121 and SNase(111-143) fragments induce the recovery of their native-like structures and the ability to degrade DNA.
Biochemistry, 48, 2009
2L9S
DownloadVisualize
BU of 2l9s by Molmil
Solution structure of Pf1 SID1-mSin3A PAH2 Complex
Descriptor: PHD finger protein 12, Paired amphipathic helix protein Sin3a
Authors:Senthil Kumar, G, Xie, T, Zhang, Y, Radhakrishnan, I.
Deposit date:2011-02-23
Release date:2011-05-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the mSin3A PAH2-Pf1 SID1 Complex: A Mad1/Mxd1-Like Interaction Disrupted by MRG15 in the Rpd3S/Sin3S Complex.
J.Mol.Biol., 408, 2011
2PQE
DownloadVisualize
BU of 2pqe by Molmil
Solution structure of proline-free mutant of staphylococcal nuclease
Descriptor: Thermonuclease
Authors:Shan, L, Tong, Y, Xie, T, Wang, M, Wang, J.
Deposit date:2007-05-01
Release date:2007-06-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Restricted backbone conformational and motional flexibilities of loops containing peptidyl-proline bonds dominate the enzyme activity of staphylococcal nuclease.
Biochemistry, 46, 2007
6M4O
DownloadVisualize
BU of 6m4o by Molmil
Cryo-EM structure of the monomeric SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-03-08
Release date:2021-02-10
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
6M4N
DownloadVisualize
BU of 6m4n by Molmil
Cryo-EM structure of the dimeric SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-03-07
Release date:2021-02-10
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7CQI
DownloadVisualize
BU of 7cqi by Molmil
Cryo-EM structure of the substrate-bound SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, Serine palmitoyltransferase 1, Serine palmitoyltransferase 2, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-08-11
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7CQK
DownloadVisualize
BU of 7cqk by Molmil
Cryo-EM structure of the substrate-bound SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, Serine palmitoyltransferase 1, Serine palmitoyltransferase 2, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-08-11
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7C6C
DownloadVisualize
BU of 7c6c by Molmil
Crystal structure of native chitosanase from Bacillus subtilis MY002
Descriptor: (2S)-2-hydroxybutanedioic acid, Chitosanase
Authors:Gou, Y, Liu, Z.C, Xie, T, Wang, G.G.
Deposit date:2020-05-21
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.258 Å)
Cite:Structure-based rational design of chitosanase CsnMY002 for high yields of chitobiose.
Colloids Surf B Biointerfaces, 202, 2021
7C6D
DownloadVisualize
BU of 7c6d by Molmil
Crystal structure of E19A mutant chitosanase from Bacillus subtilis MY002 complexed with 6 GlcN.
Descriptor: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, Chitosanase
Authors:Gou, Y, Liu, Z.C, Xie, T, Wang, G.G.
Deposit date:2020-05-21
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Structure-based rational design of chitosanase CsnMY002 for high yields of chitobiose.
Colloids Surf B Biointerfaces, 202, 2021
1RKN
DownloadVisualize
BU of 1rkn by Molmil
Solution structure of 1-110 fragment of Staphylococcal Nuclease with G88W mutation
Descriptor: Thermonuclease
Authors:Liu, D.S, Feng, Y.G, Ye, K.Q, Shan, L, Wang, J.F.
Deposit date:2003-11-22
Release date:2004-12-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
7WWB
DownloadVisualize
BU of 7wwb by Molmil
Choline transporter-like protein 1
Descriptor: CHOLESTEROL, CHOLINE ION, Choline transporter-like protein 1
Authors:Chi, X.M, Zhou, Q.
Deposit date:2022-02-12
Release date:2022-06-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Rational exploration of fold atlas for human solute carrier proteins.
Structure, 30, 2022
8SLN
DownloadVisualize
BU of 8sln by Molmil
Crystal structure of Deinococcus geothermalis PprI complexed with ssDNA
Descriptor: DNA (29-MER), MANGANESE (II) ION, Zn dependent hydrolase fused to HTH domain, ...
Authors:Zhao, Y, Lu, H.
Deposit date:2023-04-23
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Deinococcus protease PprI senses DNA damage by directly interacting with single-stranded DNA.
Nat Commun, 15, 2024
8SLM
DownloadVisualize
BU of 8slm by Molmil
Crystal structure of Deinococcus geothermalis PprI
Descriptor: MANGANESE (II) ION, SULFATE ION, Zn dependent hydrolase fused to HTH domain, ...
Authors:Zhao, Y, Lu, H.
Deposit date:2023-04-23
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The Deinococcus protease PprI senses DNA damage by directly interacting with single-stranded DNA.
Nat Commun, 15, 2024
4OBE
DownloadVisualize
BU of 4obe by Molmil
Crystal Structure of GDP-bound Human KRas
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Hunter, J.C, Gurbani, D, Chen, Z, Westover, K.D.
Deposit date:2014-01-07
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:In situ selectivity profiling and crystal structure of SML-8-73-1, an active site inhibitor of oncogenic K-Ras G12C.
Proc.Natl.Acad.Sci.USA, 111, 2014
7MXN
DownloadVisualize
BU of 7mxn by Molmil
PRMT5(M420T mutant):MEP50 complexed with inhibitor PF-06939999
Descriptor: (1S,2S,3S,5R)-3-{[6-(difluoromethyl)-5-fluoro-1,2,3,4-tetrahydroisoquinolin-8-yl]oxy}-5-(4-methyl-7H-pyrrolo[2,3-d]pyrimidin-7-yl)cyclopentane-1,2-diol, Methylosome protein 50, Protein arginine N-methyltransferase 5
Authors:McTigue, M, Deng, Y.L, Liu, W, Brooun, A.
Deposit date:2021-05-19
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:SAM-Competitive PRMT5 Inhibitor PF-06939999 Demonstrates Antitumor Activity in Splicing Dysregulated NSCLC with Decreased Liability of Drug Resistance.
Mol.Cancer Ther., 21, 2022
7MX7
DownloadVisualize
BU of 7mx7 by Molmil
PRMT5:MEP50 complexed with inhibitor PF-06939999
Descriptor: (1S,2S,3S,5R)-3-{[6-(difluoromethyl)-5-fluoro-1,2,3,4-tetrahydroisoquinolin-8-yl]oxy}-5-(4-methyl-7H-pyrrolo[2,3-d]pyrimidin-7-yl)cyclopentane-1,2-diol, Methylosome protein 50, Protein arginine N-methyltransferase 5
Authors:McTigue, M, Deng, Y.L, Liu, W, Brooun, A.
Deposit date:2021-05-18
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:SAM-Competitive PRMT5 Inhibitor PF-06939999 Demonstrates Antitumor Activity in Splicing Dysregulated NSCLC with Decreased Liability of Drug Resistance.
Mol.Cancer Ther., 21, 2022
7MXA
DownloadVisualize
BU of 7mxa by Molmil
PRMT5:MEP50 complexed with inhibitor PF-06855800
Descriptor: 7-[(5R)-5-C-(4-chloro-3-fluorophenyl)-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Methylosome protein 50, Protein arginine N-methyltransferase 5
Authors:McTigue, M, Deng, Y.L, Liu, W, Brooun, A.
Deposit date:2021-05-18
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.713 Å)
Cite:SAM-Competitive PRMT5 Inhibitor PF-06939999 Demonstrates Antitumor Activity in Splicing Dysregulated NSCLC with Decreased Liability of Drug Resistance.
Mol.Cancer Ther., 21, 2022
7MXC
DownloadVisualize
BU of 7mxc by Molmil
PRMT5:MEP50 complexed with adenosine
Descriptor: ADENOSINE, Methylosome protein 50, Protein arginine N-methyltransferase 5
Authors:McTigue, M, Deng, Y.L, Liu, W, Brooun, A.
Deposit date:2021-05-18
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:SAM-Competitive PRMT5 Inhibitor PF-06939999 Demonstrates Antitumor Activity in Splicing Dysregulated NSCLC with Decreased Liability of Drug Resistance.
Mol.Cancer Ther., 21, 2022

222415

건을2024-07-10부터공개중

PDB statisticsPDBj update infoContact PDBjnumon