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6JUU
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BU of 6juu by Molmil
Crystal structure of ZAK in complex with compound 6r
Descriptor: Mitogen-activated protein kinase kinase kinase MLT, ~{N}-[2,4-bis(fluoranyl)-3-[4-(3-methoxy-1~{H}-pyrazolo[3,4-b]pyridin-5-yl)-1,2,3-triazol-1-yl]phenyl]naphthalene-1-sulfonamide
Authors:Kong, L.L, Yun, C.H.
Deposit date:2019-04-15
Release date:2020-04-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Design, Synthesis, and Structure-Activity Relationships of 1,2,3-Triazole Benzenesulfonamides as New Selective Leucine-Zipper and Sterile-alpha Motif Kinase (ZAK) Inhibitors.
J.Med.Chem., 63, 2020
6JUT
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BU of 6jut by Molmil
Crystal structure of ZAK in complex with compound 6k
Descriptor: Mitogen-activated protein kinase kinase kinase MLT, ~{N}-[2,4-bis(fluoranyl)-3-[4-(3-methoxy-1~{H}-pyrazolo[3,4-b]pyridin-5-yl)-1,2,3-triazol-1-yl]phenyl]-3-bromanyl-benzenesulfonamide
Authors:Kong, L.L, Yun, C.H.
Deposit date:2019-04-15
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Design, Synthesis, and Structure-Activity Relationships of 1,2,3-Triazole Benzenesulfonamides as New Selective Leucine-Zipper and Sterile-alpha Motif Kinase (ZAK) Inhibitors.
J.Med.Chem., 63, 2020
8KFA
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BU of 8kfa by Molmil
Cryo-EM structure of HSV-1 gB with D48 Fab complex
Descriptor: D48 heavy chain, D48 light chain, Envelope glycoprotein B
Authors:Yang, J, Sun, C, Fang, X, Zeng, M, Liu, Z.
Deposit date:2023-08-15
Release date:2024-01-03
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:The structure of HSV-1 gB bound to a potent neutralizing antibody reveals a conservative antigenic domain across herpesviruses
hlife, 2023
8TGP
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BU of 8tgp by Molmil
Crystal structure of SIRT2 with FAM-PEG4-H4K16(myristoyl) peptide
Descriptor: H4K16(myristoyl) peptide, MYRISTIC ACID, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Nicely, N.I, Weiser, B.P.
Deposit date:2023-07-12
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Effects of Dimerization on the Deacylase Activities of Human SIRT2.
Biochemistry, 62, 2023
6AH8
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BU of 6ah8 by Molmil
Marine bacterial prolidase with promiscuous organophosphorus hydrolase activity
Descriptor: MANGANESE (II) ION, SULFATE ION, Xaa-Pro dipeptidase
Authors:Jian, Y.
Deposit date:2018-08-17
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Repurposing a bacterial prolidase for organophosphorus hydrolysis: Reshaped catalytic cavity switches substrate selectivity.
Biotechnol.Bioeng., 117, 2020
6AH7
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BU of 6ah7 by Molmil
D45W/H226G mutant of marine bacterial prolidase
Descriptor: MANGANESE (II) ION, SODIUM ION, SULFATE ION, ...
Authors:Jian, Y, Yunzhu, X, Lijuan, L.
Deposit date:2018-08-17
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Repurposing a bacterial prolidase for organophosphorus hydrolysis: Reshaped catalytic cavity switches substrate selectivity.
Biotechnol.Bioeng., 117, 2020
7WRW
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BU of 7wrw by Molmil
Structure of Deinococcus radiodurans HerA
Descriptor: HerA
Authors:Cheng, K.
Deposit date:2022-01-27
Release date:2023-02-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.00008273 Å)
Cite:Structural and DNA end resection study of the bacterial NurA-HerA complex.
Bmc Biol., 21, 2023
7WRX
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BU of 7wrx by Molmil
Structure of Deinococcus radiodurans HerA-ADP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HerA, MAGNESIUM ION
Authors:Cheng, K.
Deposit date:2022-01-27
Release date:2023-02-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.40003562 Å)
Cite:Structural and DNA end resection study of the bacterial NurA-HerA complex.
Bmc Biol., 21, 2023
4LX4
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BU of 4lx4 by Molmil
Crystal Structure Determination of Pseudomonas stutzeri endoglucanase Cel5A using a Twinned Data Set
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglucanase(Endo-1,4-beta-glucanase)protein
Authors:Dutoit, R, Delsaute, M, Berlemont, R, Van Elder, D, Galleni, M, Bauvois, C.
Deposit date:2013-07-29
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.556 Å)
Cite:Crystal structure determination of Pseudomonas stutzeri A1501 endoglucanase Cel5A: the search for a molecular basis for glycosynthesis in GH5_5 enzymes.
Acta Crystallogr D Struct Biol, 75, 2019
1PSJ
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BU of 1psj by Molmil
ACIDIC PHOSPHOLIPASE A2 FROM AGKISTRODON HALYS PALLAS
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Wang, X.Q, Lin, Z.J.
Deposit date:1995-05-24
Release date:1996-07-11
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of an acidic phospholipase A2 from the venom of Agkistrodon halys pallas at 2.0 A resolution.
J.Mol.Biol., 255, 1996
6Y6C
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BU of 6y6c by Molmil
TREM2 extracellular domain (19-174) in complex with single-chain variable fragment (scFv-4)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Single chain variable, Triggering receptor expressed on myeloid cells 2
Authors:Szykowska, A, Preger, C, Williams, E, Mukhopadhyay, S.M.M, McKinley, G, Gruslund, S, Wigren, E, Persson, H, Arrowsmith, C.H, Edwards, A, von Delft, F, Bountra, C, Davis, J.B, Di Daniel, E, Burgess-Brown, N, Bullock, A.
Deposit date:2020-02-26
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain.
Structure, 29, 2021
6YMQ
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BU of 6ymq by Molmil
TREM2 extracellular domain (19-131) in complex with single-chain variable 4 (scFv-4)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Single-chain variable 4, ...
Authors:Szykowska, A, Preger, C, Scacioc, A, Mukhopadhyay, S.M.M, McKinley, G, Graslund, S, Wigren, E, Persson, H, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Di Daniel, E, Davis, J.B, Burgess-Brown, N, Bullock, A.
Deposit date:2020-04-09
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain.
Structure, 29, 2021
6YYE
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BU of 6yye by Molmil
TREM2 extracellular domain (19-131) in complex with single-chain variable fragment (scFv-2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, TREM2 Single chain variable 2, Triggering receptor expressed on myeloid cells 2
Authors:Szykowska, A, Preger, C, Krojer, T, Mukhopadhyay, S.M.M, McKinley, G, Graslund, S, Wigren, E, Persson, H, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Di Daniel, E, Burgess-Brown, N, Bullock, A.
Deposit date:2020-05-04
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain.
Structure, 29, 2021
5D39
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BU of 5d39 by Molmil
Transcription factor-DNA complex
Descriptor: DNA (5'-D(P*AP*TP*GP*GP*AP*TP*TP*TP*CP*CP*TP*GP*GP*AP*AP*GP*AP*CP*AP*GP*A)-3'), DNA (5'-D(P*TP*CP*TP*GP*TP*CP*TP*TP*CP*CP*AP*GP*GP*AP*AP*AP*TP*CP*CP*AP*T)-3'), Signal transducer and activator of transcription 6
Authors:Li, J, Niu, F, Ouyang, S, Liu, Z.
Deposit date:2015-08-06
Release date:2016-08-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for DNA recognition by STAT6
Proc.Natl.Acad.Sci.USA, 113, 2016
3BYY
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BU of 3byy by Molmil
Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
Descriptor: Enterotoxin type C-3, SULFATE ION, T cell receptor beta chain 8.2
Authors:Cho, S, Eric, J.S.
Deposit date:2008-01-16
Release date:2009-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
To be Published
3BZD
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BU of 3bzd by Molmil
Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
Descriptor: Enterotoxin type C-3, SULFATE ION, T cell receptor beta chain 8.2
Authors:Cho, S.
Deposit date:2008-01-17
Release date:2009-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
To be Published
3CB8
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BU of 3cb8 by Molmil
4Fe-4S-Pyruvate formate-lyase activating enzyme in complex with AdoMet and a peptide substrate
Descriptor: FORMIC ACID, IRON/SULFUR CLUSTER, Pyruvate formate-lyase 1-activating enzyme, ...
Authors:Vey, J.L, Drennan, C.L.
Deposit date:2008-02-21
Release date:2008-10-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural basis for glycyl radical formation by pyruvate formate-lyase activating enzyme.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BVG
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BU of 3bvg by Molmil
Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
Descriptor: Enterotoxin type C-3, ZINC ION
Authors:Cho, S, Eric, J.S.
Deposit date:2008-01-07
Release date:2009-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Assessing energetic contributions to binding from a disordered region in a protein-protein interaction
Biochemistry, 49, 2010
3C8F
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BU of 3c8f by Molmil
4Fe-4S-Pyruvate formate-lyase Activating Enzyme with partially disordered AdoMet
Descriptor: IRON/SULFUR CLUSTER, Pyruvate formate-lyase 1-activating enzyme, TRIETHYLENE GLYCOL, ...
Authors:Vey, J.L, Drennan, C.L.
Deposit date:2008-02-11
Release date:2008-10-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for glycyl radical formation by pyruvate formate-lyase activating enzyme.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BYT
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BU of 3byt by Molmil
A complex between a variant of staphylococcal enterotoxin C3 and the variable domain of the murine T cell receptor beta chain 8.2
Descriptor: Enterotoxin type C-3, T cell receptor beta chain 8.2
Authors:Cho, S, Eric, J.S.
Deposit date:2008-01-16
Release date:2009-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex
To be Published
2KQC
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BU of 2kqc by Molmil
Second PBZ domain of human APLF protein
Descriptor: Aprataxin and PNK-like factor, ZINC ION
Authors:Neuhaus, D, Eustermann, S, Brockmann, C, Yang, J.
Deposit date:2009-11-04
Release date:2010-01-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose).
Nat.Struct.Mol.Biol., 17, 2010
2KQB
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BU of 2kqb by Molmil
First PBZ domain of human APLF protein
Descriptor: Aprataxin and PNK-like factor, ZINC ION
Authors:Neuhaus, D, Eustermann, S, Brockmann, C, Yang, J.
Deposit date:2009-11-04
Release date:2010-01-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose).
Nat.Struct.Mol.Biol., 17, 2010
2KQD
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BU of 2kqd by Molmil
First PBZ domain of human APLF protein in complex with ribofuranosyladenosine
Descriptor: ADENOSINE, Aprataxin and PNK-like factor, ZINC ION, ...
Authors:Neuhaus, D, Eustermann, S, Brockmann, C, Yang, J.
Deposit date:2009-11-04
Release date:2010-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose).
Nat.Struct.Mol.Biol., 17, 2010
2KQE
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BU of 2kqe by Molmil
Second PBZ domain of human APLF protein in complex with ribofuranosyladenosine
Descriptor: ADENOSINE, Aprataxin and PNK-like factor, ZINC ION, ...
Authors:Neuhaus, D, Eustermann, S, Brockmann, C, Yang, J.
Deposit date:2009-11-04
Release date:2010-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose).
Nat.Struct.Mol.Biol., 17, 2010
4Y5W
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BU of 4y5w by Molmil
Transcription factor-DNA complex
Descriptor: DNA (5'-D(P*AP*TP*GP*GP*AP*TP*TP*TP*CP*CP*TP*AP*GP*GP*AP*AP*GP*AP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*TP*CP*TP*TP*CP*CP*TP*AP*GP*GP*AP*AP*AP*TP*CP*CP*AP*T)-3'), Signal transducer and activator of transcription 6
Authors:Li, J, Niu, F, Ouyang, S, Liu, Z.
Deposit date:2015-02-12
Release date:2016-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.104 Å)
Cite:Structural basis for DNA recognition by STAT6
Proc.Natl.Acad.Sci.USA, 113, 2016

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