8FZ9
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8TCI
| Crystal structure of DNMT3C-DNMT3L in complex with CGG DNA | 分子名称: | (5'-D(P*CP*AP*TP*G)-R(P*(PYO))-D(P*GP*GP*TP*CP*TP*AP*AP*TP*TP*AP*GP*AP*CP*CP*GP*CP*AP*TP*G)-3'), DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3C, ... | 著者 | Khudaverdyan, N, Song, J. | 登録日 | 2023-07-01 | 公開日 | 2024-08-14 | 最終更新日 | 2024-09-11 | 実験手法 | X-RAY DIFFRACTION (3.19 Å) | 主引用文献 | The structure of DNA methyltransferase DNMT3C reveals an activity-tuning mechanism for DNA methylation. J.Biol.Chem., 300, 2024
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6H78
| E1 enzyme for ubiquitin like protein activation. | 分子名称: | 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ... | 著者 | Soudah, N, Padala, P, Hassouna, F, Mashahreh, B, Lebedev, A.A, Isupov, M.N, Cohen-Kfir, E, Wiener, R. | 登録日 | 2018-07-30 | 公開日 | 2018-10-31 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | An N-Terminal Extension to UBA5 Adenylation Domain Boosts UFM1 Activation: Isoform-Specific Differences in Ubiquitin-like Protein Activation. J.Mol.Biol., 431, 2019
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6H77
| E1 enzyme for ubiquitin like protein activation in complex with UBL | 分子名称: | 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ... | 著者 | Soudah, N, Padala, P, Hassouna, F, Mashahreh, B, Lebedev, A.A, Isupov, M.N, Cohen-Kfir, E, Wiener, R. | 登録日 | 2018-07-30 | 公開日 | 2018-10-31 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | An N-Terminal Extension to UBA5 Adenylation Domain Boosts UFM1 Activation: Isoform-Specific Differences in Ubiquitin-like Protein Activation. J.Mol.Biol., 431, 2019
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4B9W
| Structure of extended Tudor domain TD3 from mouse TDRD1 in complex with MILI peptide containing dimethylarginine 45. | 分子名称: | GLYCEROL, PIWI-LIKE PROTEIN 2, TUDOR DOMAIN-CONTAINING PROTEIN 1 | 著者 | Mathioudakis, N, Palencia, A, Kadlec, J, Round, A, Tripsianes, K, Sattler, M, Pillai, R.S, Cusack, S. | 登録日 | 2012-09-08 | 公開日 | 2012-10-17 | 最終更新日 | 2019-04-10 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse Piwi proteins and piRNA biogenesis factors. Rna, 18, 2012
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4B9X
| Structure of extended Tudor domain TD3 from mouse TDRD1 | 分子名称: | TUDOR DOMAIN-CONTAINING PROTEIN 1 | 著者 | Mathioudakis, N, Palencia, A, Kadlec, J, Round, A, Tripsianes, K, Sattler, M, Pillai, R.S, Cusack, S. | 登録日 | 2012-09-08 | 公開日 | 2012-10-17 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | The Multiple Tudor Domain-Containing Protein Tdrd1 is a Molecular Scaffold for Mouse Piwi Proteins and Pirna Biogenesis Factors. RNA, 18, 2012
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3X44
| Crystal structure of O-ureido-L-serine-bound K43A mutant of O-ureido-L-serine synthase | 分子名称: | (E)-O-(carbamoylamino)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine, O-ureido-L-serine synthase | 著者 | Matoba, Y, Uda, N, Oda, K, Sugiyama, M. | 登録日 | 2015-03-13 | 公開日 | 2015-07-29 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | The structural and mutational analyses of O-ureido-L-serine synthase necessary for D-cycloserine biosynthesis. Febs J., 282, 2015
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3X43
| Crystal structure of O-ureido-L-serine synthase | 分子名称: | O-ureido-L-serine synthase, PYRIDOXAL-5'-PHOSPHATE | 著者 | Matoba, Y, Uda, N, Oda, K, Sugiyama, M. | 登録日 | 2015-03-13 | 公開日 | 2015-07-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | The structural and mutational analyses of O-ureido-L-serine synthase necessary for D-cycloserine biosynthesis. Febs J., 282, 2015
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4C1Q
| Crystal structure of the PRDM9 SET domain in complex with H3K4me2 and AdoHcy. | 分子名称: | GLYCEROL, HISTONE H3.1, HISTONE-LYSINE N-METHYLTRANSFERASE PRDM9, ... | 著者 | Mathioudakis, N, Cusack, S, Kadlec, J. | 登録日 | 2013-08-13 | 公開日 | 2013-10-16 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Molecular Basis for the Regulation of the H3K4 Methyltransferase Activity of Prdm9. Cell Rep., 5, 2013
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6DBY
| Crystal structure of Nudix 1 from Arabidopsis thaliana | 分子名称: | MAGNESIUM ION, Nudix hydrolase 1 | 著者 | Noel, J.P, Thomas, S.T, Dudareva, N, Henry, L.K. | 登録日 | 2018-05-03 | 公開日 | 2018-09-19 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Contribution of isopentenyl phosphate to plant terpenoid metabolism. Nat Plants, 4, 2018
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1V9J
| Solution structure of a BolA-like protein from Mus musculus | 分子名称: | BolA-like protein RIKEN cDNA 1110025L05 | 著者 | Kasai, T, Inoue, M, Koshiba, S, Yabuki, T, Aoki, M, Nunokawa, E, Seki, E, Matsuda, T, Matsuda, N, Tomo, Y, Shirouzu, M, Terada, T, Obayashi, N, Hamana, H, Shinya, N, Tatsuguchi, A, Yasuda, S, Yoshida, M, Hirota, H, Matsuo, Y, Tani, K, Suzuki, H, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-01-26 | 公開日 | 2004-02-10 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of a BolA-like protein from Mus musculus Protein Sci., 13, 2004
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1SYK
| Crystal structure of E230Q mutant of cAMP-dependent protein kinase reveals unexpected apoenzyme conformation | 分子名称: | cAMP-dependent protein kinase, alpha-catalytic subunit | 著者 | Wu, J, Yang, J, Madhusudan, N, Xuong, N.H, Ten Eyck, L.F, Taylor, S.S. | 登録日 | 2004-04-01 | 公開日 | 2005-05-17 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of the E230Q mutant of cAMP-dependent
protein kinase reveals an unexpected apoenzyme conformation and an
extended N-terminal A helix. Protein Sci., 14, 2005
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6DBZ
| Crystal structure of Nudix 1 from Arabidopsis thaliana complexed with isopentenyl diphosphate | 分子名称: | ISOPENTYL PYROPHOSPHATE, MAGNESIUM ION, Nudix hydrolase 1 | 著者 | Noel, J.P, Thomas, S.T, Dudareva, N, Henry, L.K. | 登録日 | 2018-05-03 | 公開日 | 2018-09-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Contribution of isopentenyl phosphate to plant terpenoid metabolism. Nat Plants, 4, 2018
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8HYF
| Crystal Structure of Banana Lectin In-complex with Fucose at 2.95 A Resolution | 分子名称: | CADMIUM ION, CHLORIDE ION, GLYCEROL, ... | 著者 | Rasheed, S, Arif, R, Huda, N, Ahmad, M.S, Mateen, S.M. | 登録日 | 2023-01-06 | 公開日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | 主引用文献 | Crystal Structure of Banana Lectin in-Complex with L-Fucose at 2.95 A Resolution To Be Published
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8J2O
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8JEE
| Crystal Structure of Human Carbonic Anhydrase II In-complex with Levosulpiride at 2.96 A Resolution | 分子名称: | Carbonic anhydrase 2, GLYCEROL, Levosulpiride, ... | 著者 | Rasheed, S, Huda, N, Falke, S, Fisher, S.Z, Ahmad, M.S. | 登録日 | 2023-05-15 | 公開日 | 2024-05-15 | 実験手法 | X-RAY DIFFRACTION (2.96 Å) | 主引用文献 | Crystal Structure of Human Carbonic Anhydrase II In-complex with Levosulpiride at 2.96 A Resolution To Be Published
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5CU5
| Crystal structure of ERAP2 without catalytic Zn(II) atom | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 2, ... | 著者 | Saridakis, E, Mathioudakis, N, Giastas, P, Mavridis, I.M, Stratikos, E. | 登録日 | 2015-07-24 | 公開日 | 2015-09-23 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (3.02 Å) | 主引用文献 | Structural Basis for Antigenic Peptide Recognition and Processing by Endoplasmic Reticulum (ER) Aminopeptidase 2. J.Biol.Chem., 290, 2015
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5Y5N
| Crystal structure of human Sirtuin 2 in complex with a selective inhibitor | 分子名称: | 2-[[3-(2-phenylethoxy)phenyl]amino]benzamide, NAD-dependent protein deacetylase sirtuin-2, ZINC ION | 著者 | Mellini, P, Itoh, Y, Tsumoto, H, Li, Y, Suzuki, M, Tokuda, N, Kakizawa, T, Miura, Y, Takeuchi, J, Lahtela-Kakkonen, M, Suzuki, T. | 登録日 | 2017-08-09 | 公開日 | 2017-09-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Potent mechanism-based sirtuin-2-selective inhibition by anin situ-generated occupant of the substrate-binding site, "selectivity pocket" and NAD+-binding site. Chem Sci, 8, 2017
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6JIL
| Crystal structure of D-cycloserine synthetase DcsG | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Cycloserine biosynthesis protein DcsG, L(+)-TARTARIC ACID, ... | 著者 | Matoba, Y, Sugiyama, M. | 登録日 | 2019-02-22 | 公開日 | 2019-12-18 | 最終更新日 | 2020-07-22 | 実験手法 | X-RAY DIFFRACTION (2.32 Å) | 主引用文献 | Cyclization mechanism catalyzed by an ATP-grasp enzyme essential for d-cycloserine biosynthesis. Febs J., 287, 2020
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6WEB
| Multi-Hit SFX using MHz XFEL sources | 分子名称: | 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ... | 著者 | Holmes, S, Darmanin, C, Abbey, B. | 登録日 | 2020-04-01 | 公開日 | 2021-10-13 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Megahertz pulse trains enable multi-hit serial femtosecond crystallography experiments at X-ray free electron lasers. Nat Commun, 13, 2022
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6WEC
| Multi-Hit SFX using MHz XFEL sources | 分子名称: | 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ... | 著者 | Holmes, S, Darmanin, C, Abbey, B. | 登録日 | 2020-04-01 | 公開日 | 2021-10-13 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Megahertz pulse trains enable multi-hit serial femtosecond crystallography experiments at X-ray free electron lasers. Nat Commun, 13, 2022
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6GTH
| Serial Femtosecond Crystallography at Megahertz pulse rates | 分子名称: | (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase | 著者 | Wiedorn, M, Oberthuer, D, Werner, N, Schubert, R, White, T.A, Mancuso, A, Perbandt, M, Betzel, C, Barty, A, Chapman, H. | 登録日 | 2018-06-18 | 公開日 | 2018-10-10 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (1.69 Å) | 主引用文献 | Megahertz serial crystallography. Nat Commun, 9, 2018
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6FTR
| Serial Femtosecond Crystallography at Megahertz pulse rates | 分子名称: | 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ... | 著者 | Wiedorn, M.O, Oberthuer, D, Barty, A, Chapman, H.N. | 登録日 | 2018-02-23 | 公開日 | 2018-10-10 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (1.76000106 Å) | 主引用文献 | Megahertz serial crystallography. Nat Commun, 9, 2018
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6PFY
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8I5A
| N-acetyl-(R)-beta-phenylalanine acylase, 2.75 angstrom resolution | 分子名称: | N-acetyl-(R)-beta-phenylalanine acylase | 著者 | Kato, Y, Natsume, R. | 登録日 | 2023-01-24 | 公開日 | 2023-03-15 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | 主引用文献 | Expression, purification and crystallization of N-acetyl-(R)-beta-phenylalanine acylases derived from Burkholderia sp. AJ110349 and Variovorax sp. AJ110348 and structure determination of the Burkholderia enzyme. Acta Crystallogr.,Sect.F, 79, 2023
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