1MZP
| Structure of the L1 protuberance in the ribosome | 分子名称: | 50s ribosomal protein L1P, MAGNESIUM ION, fragment of 23S rRNA | 著者 | Nikulin, A, Eliseikina, I, Tishchenko, S, Nevskaya, N, Davydova, N, Platonova, O, Piendl, W, Selmer, M, Liljas, A, Zimmermann, R, Garber, M, Nikonov, S. | 登録日 | 2002-10-09 | 公開日 | 2003-01-21 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.65 Å) | 主引用文献 | Structure of the L1 protuberance in the ribosome. Nat.Struct.Biol., 10, 2003
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1DK1
| DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX | 分子名称: | 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, POTASSIUM ION, ... | 著者 | Nikulin, A, Serganov, A, Ennifar, E, Tischenko, S, Nevskaya, N. | 登録日 | 1999-12-06 | 公開日 | 2000-04-02 | 最終更新日 | 2021-11-03 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of the S15-rRNA complex. Nat.Struct.Biol., 7, 2000
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1MJI
| DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX | 分子名称: | 50S ribosomal protein L5, 5S rRNA fragment, MAGNESIUM ION, ... | 著者 | Perederina, A, Nevskaya, N, Nikonov, O, Nikulin, A, Dumas, P, Yao, M, Tanaka, I, Garber, M, Gongadze, G, Nikonov, S. | 登録日 | 2002-08-28 | 公開日 | 2003-01-21 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Detailed analysis of RNA-protein interactions within the bacterial ribosomal
protein L5/5S rRNA complex RNA, 8, 2002
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1I6U
| RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII | 分子名称: | 16S RRNA FRAGMENT, 30S RIBOSOMAL PROTEIN S8P, SULFATE ION | 著者 | Tishchenko, S, Nikulin, A, Fomenkova, N, Nevskaya, N, Nikonov, O, Dumas, P, Moine, H, Ehresmann, B, Ehresmann, C, Piendl, W, Lamzin, V, Garber, M, Nikonov, S. | 登録日 | 2001-03-05 | 公開日 | 2001-08-03 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Detailed analysis of RNA-protein interactions within the ribosomal protein S8-rRNA complex from the archaeon Methanococcus jannaschii. J.Mol.Biol., 311, 2001
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4RWN
| Crystal structure of the pre-reactive state of porcine OAS1 | 分子名称: | 2'-5'-oligoadenylate synthase 1, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ... | 著者 | Lohoefener, J, Steinke, N, Kay-Fedorov, P, Baruch, P, Nikulin, A, Tishchenko, S, Manstein, D.J, Fedorov, R. | 登録日 | 2014-12-05 | 公開日 | 2015-05-20 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | The Activation Mechanism of 2'-5'-Oligoadenylate Synthetase Gives New Insights Into OAS/cGAS Triggers of Innate Immunity. Structure, 23, 2015
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4RWO
| Crystal structure of the porcine OAS1 L149R mutant in complex with dsRNA and ApCpp in the AMP donor position | 分子名称: | 2'-5'-oligoadenylate synthase 1, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ... | 著者 | Lohoefener, J, Steinke, N, Kay-Fedorov, P, Baruch, P, Nikulin, A, Tishchenko, S, Manstein, D.J, Fedorov, R. | 登録日 | 2014-12-05 | 公開日 | 2015-05-20 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | The Activation Mechanism of 2'-5'-Oligoadenylate Synthetase Gives New Insights Into OAS/cGAS Triggers of Innate Immunity. Structure, 23, 2015
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3M4G
| H57A HFQ from Pseudomonas Aeruginosa | 分子名称: | Protein hfq, ZINC ION | 著者 | Moskaleva, O, Melnik, B, Gabdulkhakov, A, Garber, M, Nikonov, S, Stolboushkina, E, Nikulin, A. | 登録日 | 2010-03-11 | 公開日 | 2010-07-28 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | 主引用文献 | The structures of mutant forms of Hfq from Pseudomonas aeruginosa reveal the importance of the conserved His57 for the protein hexamer organization. Acta Crystallogr.,Sect.F, 66, 2010
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2HW8
| Structure of ribosomal protein L1-mRNA complex at 2.1 resolution. | 分子名称: | 1,4-BUTANEDIOL, 36-MER, 50S ribosomal protein L1, ... | 著者 | Tishchenko, S, Nikonova, E, Nikulin, A, Nevskaya, N, Volchkov, S, Piendl, W, Garber, M, Nikonov, S. | 登録日 | 2006-08-01 | 公開日 | 2006-12-19 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structure of the ribosomal protein L1-mRNA complex at 2.1 A resolution: common features of crystal packing of L1-RNA complexes. ACTA CRYSTALLOGR.,SECT.D, 62, 2006
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3INZ
| H57T Hfq from Pseudomonas aeruginosa | 分子名称: | CADMIUM ION, CHLORIDE ION, Protein hfq, ... | 著者 | Moskaleva, O, Melnik, B, Gabdulkhakov, A, Garber, M, Nikonov, S, Stolboushkina, E, Nikulin, A. | 登録日 | 2009-08-13 | 公開日 | 2010-08-04 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | The structures of mutant forms of Hfq from Pseudomonas aeruginosa reveal the importance of the conserved His57 for the protein hexamer organization. Acta Crystallogr.,Sect.F, 66, 2010
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1U63
| THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-mRNA COMPLEX | 分子名称: | 49 NT FRAGMENT OF MRNA FOR L1, 50S ribosomal protein L1P | 著者 | Nevskaya, N, Tishchenko, S, Gabdoulkhakov, A, Nikonova, E, Nikonov, O, Nikulin, A, Garber, M, Nikonov, S, Piendl, W. | 登録日 | 2004-07-29 | 公開日 | 2005-04-12 | 最終更新日 | 2016-11-30 | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | 主引用文献 | Ribosomal protein L1 recognizes the same specific structural motif in its target sites on the autoregulatory mRNA and 23S rRNA. Nucleic Acids Res., 33, 2005
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1ZHO
| The structure of a ribosomal protein L1 in complex with mRNA | 分子名称: | 50S ribosomal protein L1, POTASSIUM ION, mRNA | 著者 | Nevskaya, N, Tishchenko, S, Volchkov, S, Kljashtorny, V, Nikonova, E, Nikonov, O, Nikulin, A, Kohrer, C, Piendl, W, Zimmermann, R, Stockley, P, Garber, M, Nikonov, S. | 登録日 | 2005-04-26 | 公開日 | 2006-05-09 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | New insights into the interaction of ribosomal protein L1 with RNA. J.Mol.Biol., 355, 2006
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1BXE
| RIBOSOMAL PROTEIN L22 FROM THERMUS THERMOPHILUS | 分子名称: | CHLORIDE ION, PROTEIN (RIBOSOMAL PROTEIN L22) | 著者 | Unge, J, Aberg, A, Al-Karadaghi, S, Nikulin, A, Nikonov, S, Davydova, N, Nevskaya, N, Garber, M, Liljas, A. | 登録日 | 1998-10-02 | 公開日 | 1998-10-07 | 最終更新日 | 2018-03-14 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | The crystal structure of ribosomal protein L22 from Thermus thermophilus: insights into the mechanism of erythromycin resistance. Structure, 6, 1998
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4RWP
| Crystal structure of porcine OAS1 in complex with dsRNA | 分子名称: | 2'-5'-oligoadenylate synthase 1, RNA (5'-R(*GP*GP*CP*UP*UP*UP*UP*GP*AP*CP*CP*UP*UP*UP*AP*UP*GP*AP*A)-3'), RNA (5'-R(*UP*UP*CP*AP*UP*AP*AP*AP*GP*GP*UP*CP*AP*AP*AP*AP*GP*CP*C)-3') | 著者 | Lohoefener, J, Steinke, N, Kay-Fedorov, P, Baruch, P, Nikulin, A, Tishchenko, S, Manstein, D.J, Fedorov, R. | 登録日 | 2014-12-05 | 公開日 | 2015-05-20 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | The Activation Mechanism of 2'-5'-Oligoadenylate Synthetase Gives New Insights Into OAS/cGAS Triggers of Innate Immunity. Structure, 23, 2015
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4RWQ
| Crystal structure of the apo-state of porcine OAS1 | 分子名称: | 2'-5'-oligoadenylate synthase 1 | 著者 | Lohoefener, J, Steinke, N, Kay-Fedorov, P, Baruch, P, Nikulin, A, Tishchenko, S, Manstein, D.J, Fedorov, R. | 登録日 | 2014-12-05 | 公開日 | 2015-05-20 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | 主引用文献 | The Activation Mechanism of 2'-5'-Oligoadenylate Synthetase Gives New Insights Into OAS/cGAS Triggers of Innate Immunity. Structure, 23, 2015
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4J5Y
| Crystal structure of Hfq from Pseudomonas aeruginosa in complex with ATP | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, Protein hfq, ... | 著者 | Murina, V, Lekontseva, N, Nikulin, A. | 登録日 | 2013-02-11 | 公開日 | 2013-07-31 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.0953 Å) | 主引用文献 | Hfq binds ribonucleotides in three different RNA-binding sites. Acta Crystallogr.,Sect.D, 69, 2013
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4X9C
| 1.4A crystal structure of Hfq from Methanococcus jannaschii | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | 著者 | Nikulin, A.D, Tishchenko, S.V, Nikonova, S.V, Murina, V.N, Mihailina, A.O, Lekontseva, N.V. | 登録日 | 2014-12-11 | 公開日 | 2014-12-24 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
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4X9D
| High-resolution structure of Hfq from Methanococcus jannaschii in complex with UMP | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | 著者 | Nikulin, A.D, Tishchenko, S.V, Nikonova, E.Y, Murina, V.N, Mihailina, A.O, Lekontseva, N.V. | 登録日 | 2014-12-11 | 公開日 | 2015-12-23 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
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1U1T
| Hfq protein from Pseudomonas aeruginosa. High-salt crystals | 分子名称: | Hfq protein | 著者 | Nikulin, A.D, Stolboushkina, E.A, Perederina, A.A, Vassilieva, I.M, Blaesi, U, Moll, I, Kachalova, G, Yokoyama, S, Vassylyev, D, Garber, M, Nikonov, S.V, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-07-16 | 公開日 | 2005-01-25 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structure of Pseudomonas aeruginosa Hfq protein. Acta Crystallogr.,Sect.D, 61, 2005
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1U1S
| Hfq protein from Pseudomonas aeruginosa. Low-salt crystals | 分子名称: | Hfq protein | 著者 | Nikulin, A.D, Stolboushkina, E.A, Perederina, I, Vassilieva, I.M, Blaesi, U, Moll, I, Kachalova, G, Vassylyev, D, Yokoyama, S, Garber, M, Nikonov, S.V, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-07-16 | 公開日 | 2005-01-25 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structure of Pseudomonas aeruginosa Hfq protein. Acta Crystallogr.,Sect.D, 61, 2005
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5DY9
| Y68T Hfq from Methanococcus jannaschii in complex with AMP | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ... | 著者 | Nikulin, A.D, Mikhailina, A.O, Lekontseva, N.V, Balobanov, V.A, Nikonova, E.Y, Tishchenko, S.V. | 登録日 | 2015-09-24 | 公開日 | 2016-09-28 | 最終更新日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii. J. Biomol. Struct. Dyn., 35, 2017
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2RFV
| High resolution structure of L-methionine gamma-lyase from Citrobacter freundii | 分子名称: | CHLORIDE ION, Methionine gamma-lyase | 著者 | Nikulin, A.D, Revtovich, S.V, Morozova, E.A, Nevskaya, N.A, Nikonov, S.V, Garber, M.B, Demidkina, T.V. | 登録日 | 2007-10-02 | 公開日 | 2008-08-19 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.355 Å) | 主引用文献 | High-resolution structure of methionine gamma-lyase from Citrobacter freundii. Acta Crystallogr.,Sect.D, 64, 2008
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1F7Y
| THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY | 分子名称: | 16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, ... | 著者 | Ennifar, E, Nikouline, A, Serganov, A, Tishchenko, S, Nevskaya, N, Garber, M, Ehresmann, B, Ehresmann, C, Nikonov, S, Dumas, P. | 登録日 | 2000-06-28 | 公開日 | 2000-11-22 | 最終更新日 | 2021-11-03 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | The crystal structure of UUCG tetraloop. J.Mol.Biol., 304, 2000
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1FKA
| STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION | 分子名称: | 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... | 著者 | Schluenzen, F, Tocilj, A, Zarivach, R, Harms, J, Gluehmann, M, Janell, D, Bashan, A, Bartels, H, Agmon, I, Franceschi, F, Yonath, A. | 登録日 | 2000-08-09 | 公開日 | 2000-09-04 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution. Cell(Cambridge,Mass.), 102, 2000
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6EGR
| Crystal structure of Citrobacter freundii methionine gamma-lyase with V358Y replacement | 分子名称: | DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE, ... | 著者 | Revtovich, S.V, Demitri, N, Raboni, S, Nikulin, A.D, Morozova, E.A, Demidkina, T.V, Storici, P, Mozzarelli, A. | 登録日 | 2017-09-12 | 公開日 | 2018-10-10 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Engineering methionine gamma-lyase from Citrobacter freundii for anticancer activity. Biochim Biophys Acta Proteins Proteom, 1866, 2018
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5K30
| Crystal structure of methionine gamma-lyase from Citrobacter freundii modified by S-Ethyl-L-cysteine sulfoxide | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, ... | 著者 | Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V. | 登録日 | 2016-05-19 | 公開日 | 2017-07-12 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (1.59 Å) | 主引用文献 | Sulfoxides of sulfur-containing amino acids are suicide substrates of Citrobacter freundii methionine gamma-lyase. Structural bases of the enzyme inactivation. Biochimie, 168, 2020
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