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8DLF
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BU of 8dlf by Molmil
EBNA1 DNA binding domain (DBD) (458-617)+2 repeats of family repeat (FR) region
分子名称: 2XFR DNA (56-MER), Epstein-Barr nuclear antigen 1
著者Mei, Y, Lieberman, P.M, Murakami, K.
登録日2022-07-07
公開日2023-05-17
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Cryo-EM Structure and Functional Studies of EBNA1 Binding to the Family of Repeats and Dyad Symmetry Elements of Epstein-Barr Virus oriP.
J.Virol., 96, 2022
7U1T
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BU of 7u1t by Molmil
EBNA1 DNA binding domain (401-641) binds to half Dyad Symmetry element
分子名称: DNA (59-MER), Epstein-Barr nuclear antigen 1
著者Mei, Y, Lieberman, P.
登録日2022-02-22
公開日2023-02-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献EBNA1 DNA binding domain (401-641) binds to half Dyad Symmetry element
To Be Published
5HHE
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BU of 5hhe by Molmil
Human Beclin 1 coiled-coil domain
分子名称: Beclin-1
著者Mei, Y, Sinha, S.
登録日2016-01-10
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Identification of BECN1 and ATG14 Coiled-Coil Interface Residues That Are Important for Starvation-Induced Autophagy.
Biochemistry, 55, 2016
5EFM
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BU of 5efm by Molmil
Beclin 1 Flexible-helical Domian (FHD) (141-171)
分子名称: Beclin-1, SULFATE ION
著者Sinha, S, Mei, Y.
登録日2015-10-23
公開日2016-07-20
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Conformational Flexibility Enables the Function of a BECN1 Region Essential for Starvation-Mediated Autophagy.
Biochemistry, 55, 2016
6NHJ
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BU of 6nhj by Molmil
Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development
分子名称: Major capsid protein, Minor capsid protein, Small capsomere-interacting protein, ...
著者Liu, W, Dai, X.H, Jih, J, Chan, K, Trang, P, Yu, X.K, Balogun, R, Mei, Y, Liu, F.Y, Zhou, Z.H.
登録日2018-12-22
公開日2019-03-06
最終更新日2019-11-27
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development.
PLoS Pathog., 15, 2019
6Q1F
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BU of 6q1f by Molmil
Atomic structure of the Human Herpesvirus 6B Capsid and Capsid-Associated Tegument Complexes
分子名称: Large structural phosphoprotein, Major capsid protein, Small capsomere-interacting protein, ...
著者Zhang, Y.B, Liu, W, Li, Z.H, Kumar, V, Alvarez-Cabrera, A.L, Leibovitch, E, Cui, Y.X, Mei, Y, Bi, G.Q, Jacobson, S, Zhou, Z.H.
登録日2019-08-03
公開日2019-12-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Atomic structure of the human herpesvirus 6B capsid and capsid-associated tegument complexes.
Nat Commun, 10, 2019
4NN2
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BU of 4nn2 by Molmil
Protein Crystal Structure of Human Borjeson-Forssman-Lehmann Syndrome Associated Protein PHF6
分子名称: GLYCEROL, PHD finger protein 6, ZINC ION
著者Liu, Z, Li, F, Zhang, J, Mei, Y, Wu, J, Shi, Y.
登録日2013-11-16
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.472 Å)
主引用文献Crystal Structure of the second extended PHD domain of human PHF6 protein
J.Biol.Chem., 2014
4MI8
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BU of 4mi8 by Molmil
Crystal structure of the complex of murine gamma-herpesvirus 68 Bcl-2 homolog M11 and a Beclin 1 BH3 domain-derived peptide
分子名称: Bcl-2 homolog (Gene 16?), Beclin-1, SULFATE ION
著者Su, M, Mei, Y, Sinha, S.
登録日2013-08-30
公開日2014-01-29
最終更新日2016-02-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Targeting gamma-herpesvirus 68 Bcl-2-mediated down-regulation of autophagy.
J.Biol.Chem., 289, 2014
4M02
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BU of 4m02 by Molmil
Middle fragment(residues 494-663) of the binding region of SraP
分子名称: CALCIUM ION, GLYCEROL, Serine-rich adhesin for platelets
著者Yang, Y.H, Jiang, Y.L, Zhang, J, Wang, L, Chen, Y, Zhou, C.Z.
登録日2013-08-01
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural Insights into SraP-Mediated Staphylococcus aureus Adhesion to Host Cells
Plos Pathog., 10, 2014
4M03
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BU of 4m03 by Molmil
C-terminal fragment(residues 576-751) of binding region of SraP
分子名称: CALCIUM ION, Serine-rich adhesin for platelets
著者Yang, Y.H, Jiang, Y.L, Zhang, J, Wang, L, Chen, Y, Zhou, C.Z.
登録日2013-08-01
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structural Insights into SraP-Mediated Staphylococcus aureus Adhesion to Host Cells
Plos Pathog., 10, 2014
4M01
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BU of 4m01 by Molmil
N terminal fragment(residues 245-575) of binding region of SraP
分子名称: CALCIUM ION, GLYCEROL, Serine-rich adhesin for platelets
著者Yang, Y.H, Jiang, Y.L, Zhang, J, Wang, L, Chen, Y, Zhou, C.Z.
登録日2013-08-01
公開日2014-06-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Insights into SraP-Mediated Staphylococcus aureus Adhesion to Host Cells
Plos Pathog., 10, 2014
3V43
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BU of 3v43 by Molmil
Crystal structure of MOZ
分子名称: ACETATE ION, Histone H3.1, Histone acetyltransferase KAT6A, ...
著者Qiu, Y, Li, F.
登録日2011-12-14
公開日2012-06-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Combinatorial readout of unmodified H3R2 and acetylated H3K14 by the tandem PHD finger of MOZ reveals a regulatory mechanism for HOXA9 transcription
Genes Dev., 26, 2012
2LN0
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BU of 2ln0 by Molmil
Structure of MOZ
分子名称: Histone acetyltransferase KAT6A, ZINC ION
著者Qiu, Y.
登録日2011-12-15
公開日2012-06-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Combinatorial readout of unmodified H3R2 and acetylated H3K14 by the tandem PHD finger of MOZ reveals a regulatory mechanism for HOXA9 transcription.
Genes Dev., 26, 2012
5YJ3
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BU of 5yj3 by Molmil
Crystal structure of TZAP and telomeric DNA complex
分子名称: DNA (5'-D(*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*C)-3'), DNA (5'-D(*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3'), Telomere zinc finger-associated protein, ...
著者Li, F, Zhao, Y.
登録日2017-10-07
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.845 Å)
主引用文献The 11th C2H2 zinc finger and an adjacent C-terminal arm are responsible for TZAP recognition of telomeric DNA.
Cell Res., 28, 2018
4M00
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BU of 4m00 by Molmil
Crystal structure of the ligand binding region of staphylococcal adhesion SraP
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Serine-rich adhesin for platelets, ...
著者Yang, Y.H, Jiang, Y.L, Zhang, J, Wang, L, Chen, Y, Zhou, C.Z.
登録日2013-08-01
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Insights into SraP-Mediated Staphylococcus aureus Adhesion to Host Cells
Plos Pathog., 10, 2014
7DLY
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BU of 7dly by Molmil
Crystal structure of Arabidopsis ACS7 mutant in complex with PPG
分子名称: (2E,3E)-4-(2-aminoethoxy)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]but-3-enoic acid, 1-aminocyclopropane-1-carboxylate synthase 7
著者Hao, B, Zhang, Y, Li, X, Rao, Z.
登録日2020-11-30
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Dual activities of ACC synthase: Novel clues regarding the molecular evolution of ACS genes.
Sci Adv, 7, 2021
7DLW
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BU of 7dlw by Molmil
Crystal structure of Arabidopsis ACS7 in complex with PPG
分子名称: (2E,3E)-4-(2-aminoethoxy)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]but-3-enoic acid, 1-aminocyclopropane-1-carboxylate synthase 7, SULFATE ION
著者Hao, B, Zhang, Y, Li, X, Rao, Z.
登録日2020-11-30
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Dual activities of ACC synthase: Novel clues regarding the molecular evolution of ACS genes.
Sci Adv, 7, 2021
8JY6
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BU of 8jy6 by Molmil
Structure of TbAQP2 in complex with anti-trypanosomatid drug melarsoprol
分子名称: Aquaglyceroporin 2, [(4~{R})-2-[4-[[4,6-bis(azanyl)-1,3,5-triazin-2-yl]amino]phenyl]-1,3,2-dithiarsolan-4-yl]methanol
著者Chen, W, Wang, C.
登録日2023-07-03
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural insights into drug transport by an aquaglyceroporin.
Nat Commun, 15, 2024
8JY8
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BU of 8jy8 by Molmil
Structure of TbAQP2 in complex with anti-trypanosomatid drug pentamidine
分子名称: 1,5-BIS(4-AMIDINOPHENOXY)PENTANE, Aquaglyceroporin 2
著者Chen, W, Wang, C.
登録日2023-07-03
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Structural insights into drug transport by an aquaglyceroporin.
Nat Commun, 15, 2024
8JY7
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BU of 8jy7 by Molmil
Structure of the TbAQP2 in the apo conformation
分子名称: Aquaglyceroporin 2
著者Chen, W, Wang, C.
登録日2023-07-03
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into drug transport by an aquaglyceroporin.
Nat Commun, 15, 2024
8UFE
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BU of 8ufe by Molmil
Multidrug efflux pump EfpA from mycobacterium smegmatis
分子名称: Integral membrane efflux protein EfpA, PHOSPHATIDYLETHANOLAMINE
著者Wang, S, Liao, M.
登録日2023-10-04
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Structures of the Mycobacterium tuberculosis efflux pump EfpA reveal the mechanisms of transport and inhibition.
Nat Commun, 15, 2024
8UFD
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BU of 8ufd by Molmil
Multidrug efflux pump MtEfpA bound with inhibitor BRD8000.3
分子名称: (1S,3S)-N-[6-bromo-5-(pyrimidin-2-yl)pyridin-2-yl]-2,2-dimethyl-3-(2-methylpropyl)cyclopropane-1-carboxamide, Integral membrane efflux protein EFPA, PHOSPHATIDYLETHANOLAMINE
著者Wang, S, Liao, M.
登録日2023-10-04
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structures of the Mycobacterium tuberculosis efflux pump EfpA reveal the mechanisms of transport and inhibition.
Nat Commun, 15, 2024
8WM5
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multidrug transporter EfpA from Mycobacterium tuberculosis bound with lipids
分子名称: CARDIOLIPIN, Efflux pump A, PHOSPHATIDYLETHANOLAMINE
著者Wang, S, Liao, M.
登録日2023-10-03
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structures of the Mycobacterium tuberculosis efflux pump EfpA reveal the mechanisms of transport and inhibition
Nat Commun, 15, 2024
8UOS
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Designed IL-1R antagonist IL-1Rmb80
分子名称: GLYCEROL, IL-1Rmb80
著者Jude, K.M, Garcia, K.C.
登録日2023-10-20
公開日2024-08-28
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献De novo design of miniprotein antagonists of cytokine storm inducers.
Nat Commun, 15, 2024
8UPA
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BU of 8upa by Molmil
Structure of gp130 in complex with a de novo designed IL-6 mimetic
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, De novo designed IL-6 mimetic, Interleukin-6 receptor subunit beta, ...
著者Borowska, M.T, Jude, K.M, Garcia, K.C.
登録日2023-10-22
公開日2024-08-28
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献De novo design of miniprotein antagonists of cytokine storm inducers.
Nat Commun, 15, 2024

 

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