Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8WF5
DownloadVisualize
BU of 8wf5 by Molmil
Horse heart myoglobin reconstituted with an iron complex of porphyrin bearing two CF3 groups (rMb(FePor(CF3)2))
分子名称: GLYCEROL, Myoglobin, PROTOPORPHYRIN(CF3)2 CONTAINING FE, ...
著者Kagawa, Y, Oohora, K, Himiyama, T, Suzuki, A, Hayashi, T.
登録日2023-09-19
公開日2024-06-12
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Redox Engineering of Myoglobin by Cofactor Substitution to Enhance Cyclopropanation Reactivity.
Angew.Chem.Int.Ed.Engl., 63, 2024
1SKY
DownloadVisualize
BU of 1sky by Molmil
CRYSTAL STRUCTURE OF THE NUCLEOTIDE FREE ALPHA3BETA3 SUB-COMPLEX OF F1-ATPASE FROM THE THERMOPHILIC BACILLUS PS3
分子名称: F1-ATPASE, SULFATE ION
著者Shirakihara, Y, Leslie, A.G.W, Abrahams, J.P, Walker, J.E, Ueda, T, Sekimoto, Y, Kambara, M, Saika, K, Kagawa, Y, Yoshida, M.
登録日1997-02-26
公開日1998-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The crystal structure of the nucleotide-free alpha 3 beta 3 subcomplex of F1-ATPase from the thermophilic Bacillus PS3 is a symmetric trimer.
Structure, 5, 1997
6L96
DownloadVisualize
BU of 6l96 by Molmil
Structure of PPARalpha-LBD/pemafibrate/SRC1 peptide
分子名称: (2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid, Peroxisome proliferator-activated receptor alpha, SRC1 coactivator peptide
著者Kawasaki, M, Kambe, A, Yamamoto, Y, Arulmozhira, S, Ito, S, Nakagawa, Y, Tokiwa, H, Nakano, S, Shimano, H.
登録日2019-11-08
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Elucidation of Molecular Mechanism of a Selective PPAR alpha Modulator, Pemafibrate, through Combinational Approaches of X-ray Crystallography, Thermodynamic Analysis, and First-Principle Calculations.
Int J Mol Sci, 21, 2020
8KFH
DownloadVisualize
BU of 8kfh by Molmil
Crystal structure of sperm whale myoglobin reconstituted with manganese porphycene
分子名称: Myoglobin, PORPHYCENE CONTAINING MN, SULFATE ION
著者Mizohata, E, Oohora, K, Hayashi, T.
登録日2023-08-15
公開日2024-08-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Rational Design of an Artificial Ethylbenzene Hydroxylase Using Molecular Dynamics Simulation to Enhance the Enantioselectivity
To Be Published
8KFJ
DownloadVisualize
BU of 8kfj by Molmil
Crystal structure of sperm whale myoglobin (F46L/H64A mutant) reconstituted with manganese porphycene
分子名称: CHLORIDE ION, Myoglobin, PORPHYCENE CONTAINING MN, ...
著者Mizohata, E, Oohora, K, Hayashi, T.
登録日2023-08-15
公開日2024-08-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rational Design of an Artificial Ethylbenzene Hydroxylase Using Molecular Dynamics Simulation to Enhance the Enantioselectivity
To Be Published
8KFI
DownloadVisualize
BU of 8kfi by Molmil
Crystal structure of sperm whale myoglobin (F43A/H64I mutant) reconstituted with manganese porphycene
分子名称: Myoglobin, PORPHYCENE CONTAINING MN, SULFATE ION
著者Mizohata, E, Oohora, K, Hayashi, T.
登録日2023-08-15
公開日2024-08-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Rational Design of an Artificial Ethylbenzene Hydroxylase Using Molecular Dynamics Simulation to Enhance the Enantioselectivity
To Be Published
7W9Q
DownloadVisualize
BU of 7w9q by Molmil
Crystal structure of V30M-TTR in complex with naringenin derivative-14
分子名称: (2~{R})-2-(3-chloranyl-4-oxidanyl-phenyl)-5,7-bis(oxidanyl)-2,3-dihydrochromen-4-one, CALCIUM ION, Transthyretin
著者Katayama, W, Shimane, A, Nabeshima, Y, Yokoyama, T, Mizuguchi, M.
登録日2021-12-10
公開日2022-12-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Chlorinated Naringenin Analogues as Potential Inhibitors of Transthyretin Amyloidogenesis.
J.Med.Chem., 65, 2022
7W9R
DownloadVisualize
BU of 7w9r by Molmil
Crystal structure of V30M-TTR in complex with naringenin derivative-18
分子名称: (2~{R})-2-[3,5-bis(chloranyl)-4-oxidanyl-phenyl]-5,7-bis(oxidanyl)-2,3-dihydrochromen-4-one, Transthyretin
著者Katayama, W, Shimane, A, Nabeshima, Y, Yokoyama, T, Mizuguchi, M.
登録日2021-12-10
公開日2022-12-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献Chlorinated Naringenin Analogues as Potential Inhibitors of Transthyretin Amyloidogenesis.
J.Med.Chem., 65, 2022
8WGT
DownloadVisualize
BU of 8wgt by Molmil
Crystal structure of V30M-TTR in complex with compound 7
分子名称: Transthyretin, [4,7-bis(chloranyl)-2-ethyl-1-benzofuran-3-yl]-[3,5-bis(iodanyl)-4-oxidanyl-phenyl]methanone
著者Yokoyama, T.
登録日2023-09-22
公開日2024-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.696 Å)
主引用文献Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
8WGS
DownloadVisualize
BU of 8wgs by Molmil
Crystal structure of V30M-TTR in complex with compound 4
分子名称: Transthyretin, [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-(2-ethyl-4-iodanyl-1-benzofuran-3-yl)methanone
著者Yokoyama, T.
登録日2023-09-22
公開日2024-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
8WGU
DownloadVisualize
BU of 8wgu by Molmil
Crystal structure of V30M-TTR in complex with compound 20
分子名称: Transthyretin, [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-[2-ethyl-4,7-bis(fluoranyl)-1-benzofuran-3-yl]methanone
著者Yokoyama, T.
登録日2023-09-22
公開日2024-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.508 Å)
主引用文献Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
6LIV
DownloadVisualize
BU of 6liv by Molmil
Crystal structure of Tyrosine decarboxylase in complex with PLP
分子名称: GLYCEROL, Tyrosine/DOPA decarboxylase 2
著者Wang, H, Yu, J, Yao, M.
登録日2019-12-13
公開日2020-02-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal structures clarify cofactor binding of plant tyrosine decarboxylase.
Biochem.Biophys.Res.Commun., 2019
7EJR
DownloadVisualize
BU of 7ejr by Molmil
Crystal structure of V30M mutated transthyretin in complex with 8-chloro-9-oxo-9H-xanthene-3-carboxylic acid
分子名称: 8-chloranyl-9-oxidanylidene-xanthene-3-carboxylic acid, CALCIUM ION, Transthyretin
著者Kitakami, R, Yokoyama, T, Mizuguchi, M.
登録日2021-04-02
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.451 Å)
主引用文献Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7EJQ
DownloadVisualize
BU of 7ejq by Molmil
Crystal structure of human transthyretin in complex with 8-chloro-9-oxo-9H-xanthene-3-carboxylic acid
分子名称: 8-chloranyl-9-oxidanylidene-xanthene-3-carboxylic acid, CALCIUM ION, Transthyretin
著者Kitakami, R, Yokoyama, T, Mizuguchi, M.
登録日2021-04-02
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7BJV
DownloadVisualize
BU of 7bjv by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI09181
分子名称: DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ...
著者Browning, C, McEwen, A.G, Billas, I.M.L.
登録日2021-01-14
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
7BJU
DownloadVisualize
BU of 7bju by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI08346
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, ...
著者Browning, C, McEwen, A.G, Billas, I.M.L.
登録日2021-01-14
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
7DT3
DownloadVisualize
BU of 7dt3 by Molmil
Crystal structure of human transthyretin in complex with 4-chloro-9,10-dioxo-9,10-dihydroanthracene-2-carboxylic acid
分子名称: 4-chloranyl-9,10-bis(oxidanylidene)anthracene-2-carboxylic acid, CALCIUM ION, Transthyretin
著者Kitakami, R, Yokoyama, T, Mizuguchi, M.
登録日2021-01-04
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.198 Å)
主引用文献Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7DT5
DownloadVisualize
BU of 7dt5 by Molmil
Crystal structure of human transthyretin in complex with 4-chloro-9-oxo-9H-xanthene-2-carboxylic acid
分子名称: 4-chloranyl-9-oxidanylidene-xanthene-2-carboxylic acid, CALCIUM ION, Transthyretin
著者Kitakami, R, Yokoyama, T, Mizuguchi, M.
登録日2021-01-04
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7DT6
DownloadVisualize
BU of 7dt6 by Molmil
Crystal structure of V30M mutated transthyretin in complex with purpurin
分子名称: Purpurin, Transthyretin
著者Kitakami, R, Yokoyama, T, Mizuguchi, M.
登録日2021-01-04
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
7DT8
DownloadVisualize
BU of 7dt8 by Molmil
Crystal structure of V30M mutated transthyretin in complex with 4-chloro-9-oxo-9H-xanthene-2-carboxylic acid
分子名称: 4-chloranyl-9-oxidanylidene-xanthene-2-carboxylic acid, CALCIUM ION, Transthyretin
著者Kitakami, R, Yokoyama, T, Mizuguchi, M.
登録日2021-01-04
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Inhibitory activities of anthraquinone and xanthone derivatives against transthyretin amyloidogenesis.
Bioorg.Med.Chem., 44, 2021
2LDS
DownloadVisualize
BU of 2lds by Molmil
Solution Structure of a Short-chain LaIT1 from the Venom of Scorpion Liocheles australasiae
分子名称: Insecticidal toxin LaIT1
著者Horita, S, Miyakawa, T, Nagata, K, Tanokura, M.
登録日2011-06-01
公開日2011-09-14
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Solution structure of a short-chain insecticidal toxin LaIT1 from the venom of scorpion Liocheles australasiae.
Biochem.Biophys.Res.Commun., 411, 2011
8II1
DownloadVisualize
BU of 8ii1 by Molmil
Crystal structure of V30M-TTR in complex with BID
分子名称: Benziodarone, Transthyretin
著者Yokoyama, T.
登録日2023-02-24
公開日2023-06-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.907 Å)
主引用文献Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis.
Bioorg.Med.Chem., 90, 2023
8II3
DownloadVisualize
BU of 8ii3 by Molmil
Crystal structure of V30M-TTR in complex with 6-hydroxy BID
分子名称: Transthyretin, [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-(2-ethyl-6-oxidanyl-1-benzofuran-3-yl)methanone
著者Yokoyama, T.
登録日2023-02-24
公開日2023-06-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.399 Å)
主引用文献Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis.
Bioorg.Med.Chem., 90, 2023
8II2
DownloadVisualize
BU of 8ii2 by Molmil
Crystal structure of V30M-TTR in complex with BBM
分子名称: CALCIUM ION, Transthyretin, [3,5-bis(bromanyl)-4-oxidanyl-phenyl]-(2-ethyl-1-benzofuran-3-yl)methanone
著者Yokoyama, T.
登録日2023-02-24
公開日2023-06-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis.
Bioorg.Med.Chem., 90, 2023
8II4
DownloadVisualize
BU of 8ii4 by Molmil
Crystal structure of V30M-TTR in complex with 6-hydroxy BBM
分子名称: Transthyretin, [3,5-bis(bromanyl)-4-oxidanyl-phenyl]-(2-ethyl-6-oxidanyl-1-benzofuran-3-yl)methanone
著者Yokoyama, T.
登録日2023-02-24
公開日2023-06-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis.
Bioorg.Med.Chem., 90, 2023

 

12>

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon