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2B3Z
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BU of 2b3z by Molmil
Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis
分子名称: Riboflavin biosynthesis protein ribD, ZINC ION
著者Chen, S.J, Chang, Y.C, Liaw, S.H.
登録日2005-09-22
公開日2005-11-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis
To be Published
2D5N
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BU of 2d5n by Molmil
Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Riboflavin biosynthesis protein ribD, ZINC ION
著者Liaw, S.H, Chen, S.J, Chang, Y.C.
登録日2005-11-02
公開日2005-11-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis
To be Published
6IMQ
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BU of 6imq by Molmil
Crystal structure of PML B1-box multimers
分子名称: CHLORIDE ION, Protein PML, ZINC ION
著者Li, Y, Ma, X, Chen, Z, Wu, H, Wang, P, Wu, W, Cheng, N, Zeng, L, Zhang, H, Cai, X, Chen, S.J, Chen, Z, Meng, G.
登録日2018-10-23
公開日2019-07-31
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献B1 oligomerization regulates PML nuclear body biogenesis and leukemogenesis.
Nat Commun, 10, 2019
7X1N
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BU of 7x1n by Molmil
Crystal structure of MEF2D-MRE complex
分子名称: DNA (5'-D(P*AP*AP*CP*TP*AP*TP*TP*TP*AP*TP*AP*AP*G)-3'), DNA (5'-D(P*TP*CP*TP*TP*AP*TP*AP*AP*AP*TP*AP*GP*T)-3'), Myocyte enhancer factor 2D/deleted in azoospermia associated protein 1 fusion protein
著者Zhang, H, Zhang, M, Wang, Q.Q, Chen, Z, Chen, S.J, Meng, G.
登録日2022-02-24
公開日2022-05-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.315 Å)
主引用文献Functional, structural, and molecular characterizations of the leukemogenic driver MEF2D-HNRNPUL1 fusion.
Blood, 140, 2022
2ZJO
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BU of 2zjo by Molmil
Crystal structure of hepatitis C virus NS3 helicase with a novel inhibitor
分子名称: Genome polyprotein, N-[4-(BIS{4-[(3-SULFOPHENYL)AMINO]PHENYL}METHYLENE)CYCLOHEXA-2,5-DIEN-1-YLIDENE]-4-SULFOBENZENAMINIUM
著者Liaw, S.H, Chen, S.J, Hu, C.Y, Chi, W.K, Chu, I.D, Hwang, L.H, Chern, J.W, Chen, D.S.
登録日2008-03-07
公開日2009-03-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-Based Discovery of Triphenylmethane Derivatives as Novel Inhibitors of Hepatitis C Virus Helicase
To be Published
4M1L
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BU of 4m1l by Molmil
Complex of IQCG and Ca2+-bound CaM
分子名称: CALCIUM ION, Calmodulin, IQ domain-containing protein G, ...
著者Liang, W.X, Chen, L.T, Chen, Z, Chen, S.J, Chen, S.
登録日2013-08-03
公開日2014-05-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Functional and molecular features of the calmodulin-interacting protein IQCG required for haematopoiesis in zebrafish
Nat Commun, 5, 2014
4LZX
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BU of 4lzx by Molmil
Complex of IQCG and Ca2+-free CaM
分子名称: Calmodulin, IQ domain-containing protein G, SULFATE ION
著者Liang, W.X, Chen, L.T, Chen, Z, Chen, S.J, Chen, S.
登録日2013-08-01
公開日2014-05-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Functional and molecular features of the calmodulin-interacting protein IQCG required for haematopoiesis in zebrafish
Nat Commun, 5, 2014
5GUT
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BU of 5gut by Molmil
The crystal structure of mouse DNMT1 (731-1602) mutant - N1248A
分子名称: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
著者Chen, S.J, Ye, F.
登録日2016-08-31
公開日2017-09-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Biochemical Studies and Molecular Dynamic Simulations Reveal the Molecular Basis of Conformational Changes in DNA Methyltransferase-1.
ACS Chem. Biol., 13, 2018
8J6Z
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BU of 8j6z by Molmil
Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2)
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Chen, S.J.B, Wu, J.H, Sui, S.F, Zhang, L.X.
登録日2023-04-26
公開日2023-11-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Regulatory dynamics of the higher-plant PSI-LHCI supercomplex during state transitions.
Mol Plant, 16, 2023
8J7B
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BU of 8j7b by Molmil
Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 2 (PSI-ST2)
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Chen, S.J.B, Wu, J.H, Sui, S.F, Zhang, L.X.
登録日2023-04-27
公開日2023-11-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Regulatory dynamics of the higher-plant PSI-LHCI supercomplex during state transitions.
Mol Plant, 16, 2023
8J7A
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BU of 8j7a by Molmil
Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1)
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Chen, S.J.B, Wu, J.H, Sui, S.F, Zhang, L.X.
登録日2023-04-27
公開日2023-11-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Regulatory dynamics of the higher-plant PSI-LHCI supercomplex during state transitions.
Mol Plant, 16, 2023
7LVA
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BU of 7lva by Molmil
Solution structure of the HIV-1 PBS-segment
分子名称: RNA (103-MER)
著者Heng, X, Song, Z.
登録日2021-02-24
公開日2021-03-17
最終更新日2024-05-15
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献The three-way junction structure of the HIV-1 PBS-segment binds host enzyme important for viral infectivity.
Nucleic Acids Res., 49, 2021
8T5C
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BU of 8t5c by Molmil
Lassa GPC Trimer in complex with Fab 8.11G and nanobody D5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8.11G Heavy Chain, 8.11G Light Chain, ...
著者Gorman, J, Kwong, P.D.
登録日2023-06-13
公開日2024-01-03
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Cleavage-intermediate Lassa virus trimer elicits neutralizing responses, identifies neutralizing nanobodies, and reveals an apex-situated site-of-vulnerability.
Nat Commun, 15, 2024
8SK5
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BU of 8sk5 by Molmil
Crystal structure of the SARS-CoV-2 neutralizing VHH 7A9 bound to the spike receptor binding domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, anti-SARS-CoV-2 receptor binding domain VHH
著者Noland, C.L, Pande, K, Zhang, L, Zhou, H, Galli, J, Eddins, M, Gomez-Llorente, Y.
登録日2023-04-18
公開日2023-08-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.011 Å)
主引用文献Discovery and multimerization of cross-reactive single-domain antibodies against SARS-like viruses to enhance potency and address emerging SARS-CoV-2 variants.
Sci Rep, 13, 2023
6RTI
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BU of 6rti by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with aptamer A9g
分子名称: (2S)-2-(PHOSPHONOMETHYL)PENTANEDIOIC ACID, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Motlova, L, Kolenko, P, Barinka, C.
登録日2019-05-24
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of prostate-specific membrane antigen recognition by the A9g RNA aptamer.
Nucleic Acids Res., 48, 2020
2ZU3
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BU of 2zu3 by Molmil
Complex structure of CVB3 3C protease with TG-0204998
分子名称: 3C proteinase, N-[(benzyloxy)carbonyl]-3-[(2,2-dimethylpropanoyl)amino]-L-alanyl-N-[(1R)-4-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}pentyl]-L-leucinamide
著者Lee, C.C, Tsui, Y.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU4
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BU of 2zu4 by Molmil
Complex structure of SARS-CoV 3CL protease with TG-0204998
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-3-[(2,2-dimethylpropanoyl)amino]-L-alanyl-N-[(1R)-4-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}pentyl]-L-leucinamide
著者Hsu, M.F, Lee, C.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZTX
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BU of 2ztx by Molmil
Complex structure of CVB3 3C protease with EPDTC
分子名称: 3C proteinase, zinc(II)hydrogensulfide
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-10
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU5
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BU of 2zu5 by Molmil
complex structure of SARS-CoV 3CL protease with TG-0205486
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-O-tert-butyl-L-threonyl-N-[(1R)-4-cyclopropyl-4-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}butyl]-L-leucinamide
著者Hsu, M.F, Lee, C.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU1
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BU of 2zu1 by Molmil
crystal structure of CVB3 3C protease mutant C147A
分子名称: 3C proteinase
著者Lee, C.C, Tsui, Y.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
6WZZ
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BU of 6wzz by Molmil
GID4 in complex with VGLWKS peptide
分子名称: Glucose-induced degradation protein 4 homolog, UNKNOWN ATOM OR ION, VGLWKS peptide
著者Dong, C, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2020-05-14
公開日2020-06-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Recognition of nonproline N-terminal residues by the Pro/N-degron pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
2ZTY
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BU of 2zty by Molmil
crystal structure of 3C protease from CVB3 in space group C2
分子名称: 3C proteinase
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-10
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU2
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BU of 2zu2 by Molmil
complex structure of CoV 229E 3CL protease with EPDTC
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3C-like proteinase, zinc(II)hydrogensulfide
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZTZ
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BU of 2ztz by Molmil
crystal structure of 3C protease from CVB3 in space group P21
分子名称: 3C proteinase
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-11
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
7RWR
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BU of 7rwr by Molmil
An RNA aptamer that decreases flavin redox potential
分子名称: FLAVIN MONONUCLEOTIDE, RNA (38-MER)
著者Gremminger, T, Li, J, Chen, S, Heng, X.
登録日2021-08-20
公開日2022-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An RNA aptamer that shifts the reduction potential of metabolic cofactors.
Nat.Chem.Biol., 18, 2022

 

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