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1WO1
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Tachyplesin I in dodecylphosphocholine micelles
分子名称: Tachyplesin I
著者Mizuguchi, M, Kamata, S, Kawabata, S, Fujitani, N, Kawano, K.
登録日2004-08-11
公開日2005-08-09
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of tachyplesin I in dodecylphosphocholine
to be published
1WO0
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Solution structure of tachyplesin I in H2O
分子名称: Tachyplesin I
著者Mizuguchi, M, Kamata, S, Kawabata, S, Fujitani, N, Kawano, K.
登録日2004-08-11
公開日2005-08-09
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of tachyplesin I in H2O
to be published
4BWS
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BU of 4bws by Molmil
Crystal structure of the heterotrimer of PQBP1, U5-15kD and U5-52kD.
分子名称: CD2 ANTIGEN CYTOPLASMIC TAIL-BINDING PROTEIN 2, POLYGLUTAMINE-BINDING PROTEIN 1, THIOREDOXIN-LIKE PROTEIN 4A
著者Mizuguchi, M, Obita, T, Serita, T, Kojima, R, Morimoto, T, Nabeshima, Y, Okazawa, H.
登録日2013-07-04
公開日2014-04-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutations in the Pqbp1 Gene Prevent its Interaction with the Spliceosomal Protein U5-15Kd.
Nat.Commun., 5, 2014
4CDO
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Crystal structure of PQBP1 bound to spliceosomal U5-15kD
分子名称: THIOREDOXIN-LIKE PROTEIN 4A, POLYGLUTAMINE-BINDING PROTEIN
著者Mizuguchi, M, Obita, T, Serita, T, Kojima, R, Nabeshima, Y, Okazawa, H.
登録日2013-11-05
公開日2014-04-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutations in the Pqbp1 Gene Prevent its Interaction with the Spliceosomal Protein U5-15Kd.
Nat.Commun., 5, 2014
4BWQ
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Crystal structure of U5-15kD in a complex with PQBP1
分子名称: POLYGLUTAMINE-BINDING PROTEIN 1, THIOREDOXIN-LIKE PROTEIN 4A
著者Mizuguchi, M, Obita, T, Serita, T, Kojima, R, Morimoto, T, Nabeshima, Y, Okazawa, H.
登録日2013-07-04
公開日2014-04-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mutations in the Pqbp1 Gene Prevent its Interaction with the Spliceosomal Protein U5-15Kd.
Nat.Commun., 5, 2014
8JOK
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Crystal structure of V30L mutated human transthyretin
分子名称: MAGNESIUM ION, Transthyretin
著者Mizuguchi, M, Yamada, S, Obita, T.
登録日2023-06-07
公開日2024-04-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Trypsin-induced aggregation of transthyretin Valine 30 variants associated with hereditary amyloidosis.
Febs J., 291, 2024
8JNU
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Crystal structure of V30G mutated human transthyretin
分子名称: MAGNESIUM ION, Transthyretin
著者Mizuguchi, M, Yamada, S, Obita, T.
登録日2023-06-06
公開日2024-04-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Trypsin-induced aggregation of transthyretin Valine 30 variants associated with hereditary amyloidosis.
Febs J., 291, 2024
8JQW
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Crystal structure of V30I mutated human transthyretin
分子名称: MAGNESIUM ION, Transthyretin
著者Mizuguchi, M, Yamada, S, Obita, T.
登録日2023-06-15
公開日2024-04-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Trypsin-induced aggregation of transthyretin Valine 30 variants associated with hereditary amyloidosis.
Febs J., 291, 2024
7W9Q
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Crystal structure of V30M-TTR in complex with naringenin derivative-14
分子名称: (2~{R})-2-(3-chloranyl-4-oxidanyl-phenyl)-5,7-bis(oxidanyl)-2,3-dihydrochromen-4-one, CALCIUM ION, Transthyretin
著者Katayama, W, Shimane, A, Nabeshima, Y, Yokoyama, T, Mizuguchi, M.
登録日2021-12-10
公開日2022-12-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Chlorinated Naringenin Analogues as Potential Inhibitors of Transthyretin Amyloidogenesis.
J.Med.Chem., 65, 2022
7W9R
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Crystal structure of V30M-TTR in complex with naringenin derivative-18
分子名称: (2~{R})-2-[3,5-bis(chloranyl)-4-oxidanyl-phenyl]-5,7-bis(oxidanyl)-2,3-dihydrochromen-4-one, Transthyretin
著者Katayama, W, Shimane, A, Nabeshima, Y, Yokoyama, T, Mizuguchi, M.
登録日2021-12-10
公開日2022-12-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献Chlorinated Naringenin Analogues as Potential Inhibitors of Transthyretin Amyloidogenesis.
J.Med.Chem., 65, 2022
8I76
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Crystal structure of decarboxylated osteocalcin at pH 2.0 without glycerol
分子名称: Osteocalcin
著者Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
登録日2023-01-31
公開日2024-01-31
実験手法X-RAY DIFFRACTION (1.381 Å)
主引用文献Crystal structures of decarboxylated osteocalcin and implications for the interaction with its receptor
To Be Published
8I75
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Crystal structure of decarboxylated osteocalcin at pH 2.0
分子名称: Osteocalcin
著者Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
登録日2023-01-31
公開日2024-01-31
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Crystal structures of decarboxylated osteocalcin and implications for the interaction with its receptor
To Be Published
8I74
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BU of 8i74 by Molmil
Crystal structure of decarboxylated osteocalcin at pH 8.5
分子名称: Osteocalcin
著者Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
登録日2023-01-31
公開日2024-01-31
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structures of decarboxylated osteocalcin and implications for the interaction with its receptor
To Be Published
1WRU
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BU of 1wru by Molmil
Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu
分子名称: 43 kDa tail protein
著者Kondou, Y, Kitazawa, D, Takeda, S, Yamashita, E, Mizuguchi, M, Kawano, K, Tsukihara, T.
登録日2004-10-27
公開日2005-09-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu
To be Published
4N87
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Crystal structure of V30M mutant human transthyretin complexed with glabridin
分子名称: 4-[(3R)-8,8-dimethyl-3,4-dihydro-2H,8H-pyrano[2,3-f]chromen-3-yl]benzene-1,3-diol, Transthyretin
著者Yokoyama, T, Kosaka, Y, Mizuguchi, M.
登録日2013-10-17
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献Crystal structures of human transthyretin complexed with glabridin
J.Med.Chem., 57, 2014
4N85
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Crystal structure of human transthyretin
分子名称: CALCIUM ION, Transthyretin
著者Yokoyama, T, Kosaka, Y, Mizuguchi, M.
登録日2013-10-17
公開日2014-02-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of human transthyretin complexed with glabridin
J.Med.Chem., 57, 2014
4N86
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Crystal structure of human transthyretin complexed with glabridin
分子名称: 4-[(3R)-8,8-dimethyl-3,4-dihydro-2H,8H-pyrano[2,3-f]chromen-3-yl]benzene-1,3-diol, CALCIUM ION, Transthyretin
著者Yokoyama, T, Kosaka, Y, Mizuguchi, M.
登録日2013-10-17
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Crystal structures of human transthyretin complexed with glabridin
J.Med.Chem., 57, 2014
2MDB
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Tachyplesin I in the presence of lipopolysaccharide
分子名称: Tachyplesin-1
著者Kushibiki, T, Kamiya, M, Aizawa, T, Kumaki, Y, Kikukawa, T, Mizuguchi, M, Demura, M, Kawabata, S.I, Kawano, K.
登録日2013-09-09
公開日2014-02-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Interaction between tachyplesin I, an antimicrobial peptide derived from horseshoe crab, and lipopolysaccharide.
Biochim.Biophys.Acta, 1844, 2014
5X2L
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BU of 5x2l by Molmil
Crystal Structure of Human Serine Racemase
分子名称: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, Serine racemase
著者Obita, T, Matsumoto, K, Mori, H, Toyooka, N, Mizuguchi, M.
登録日2017-02-01
公開日2018-01-31
最終更新日2021-02-24
実験手法X-RAY DIFFRACTION (1.806 Å)
主引用文献Design, synthesis, and evaluation of novel inhibitors for wild-type human serine racemase.
Bioorg. Med. Chem. Lett., 2017
7WL6
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BU of 7wl6 by Molmil
Crystal structure of I73L mutated human transthyretin
分子名称: MAGNESIUM ION, Transthyretin
著者Nakagawa, M, Obita, T, Mizuguchi, M.
登録日2022-01-12
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.418007 Å)
主引用文献The hydrophobic residue Leu73 is crucial for the high stability and low aggregation properties of murine transthyretin.
Biochem.J., 479, 2022
2RTV
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BU of 2rtv by Molmil
Tachyplesin I in water
分子名称: Tachyplesin-1
著者Kushibiki, T, Kamiya, M, Aizawa, T, Kumaki, Y, Kikukawa, T, Mizuguchi, M, Demura, M, Kawabata, S.I, Kawano, K.
登録日2013-09-19
公開日2014-02-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Interaction between tachyplesin I, an antimicrobial peptide derived from horseshoe crab, and lipopolysaccharide.
Biochim.Biophys.Acta, 1844, 2014
2RNG
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BU of 2rng by Molmil
Solution structure of big defensin
分子名称: Big defensin
著者Kouno, T, Fujitani, N, Osaki, T, Kawabata, S, Nishimura, S, Mizuguchi, M, Aizawa, T, Demura, M, Nitta, K, Kawano, K.
登録日2007-12-27
公開日2008-10-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A novel beta-defensin structure: a potential strategy of big defensin for overcoming resistance by Gram-positive bacteria
Biochemistry, 47, 2008
2RQ2
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The solution structure of the N-terminal fragment of big defensin
分子名称: Big defensin
著者Kouno, T, Mizuguchi, M, Aizawa, T, Shinoda, H, Demura, M, Kawabata, S, Kawano, K.
登録日2009-01-07
公開日2009-08-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A novel beta-defensin structure: big defensin changes its N-terminal structure to associate with the target membrane
Biochemistry, 48, 2009
5AON
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BU of 5aon by Molmil
Crystal structure of the conserved N-terminal domain of Pex14 from Trypanosoma brucei
分子名称: PEROXIN 14, SULFATE ION
著者Obita, T, Sugawara, Y, Mizuguchi, M, Watanabe, Y, Kawaguchi, K, Imanaka, T.
登録日2015-09-11
公開日2015-12-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.646 Å)
主引用文献Characterization of the Interaction between Trypanosoma Brucei Pex5P and its Receptor Pex14P.
FEBS Lett., 590, 2016
6AA4
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Crystal structure of MTH1 in complex with alpha-mangostin (cocktail No. 9)
分子名称: 1,3,6-trihydroxy-7-methoxy-2,8-bis(3-methylbut-2-en-1-yl)-9H-xanthen-9-one, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION, ...
著者Yokoyama, T, Kitakami, R, Mizuguchi, M.
登録日2018-07-17
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of a new class of MTH1 inhibitor by X-ray crystallographic screening.
Eur J Med Chem, 167, 2019

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