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7VFO
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BU of 7vfo by Molmil
Crystal structure of SdgB (Phosphate-binding form)
分子名称: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFK
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BU of 7vfk by Molmil
Crystal structure of SdgB (ligand-free form)
分子名称: GLYCEROL, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
6PLN
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BU of 6pln by Molmil
X-ray crystal structure of Pyrococcus furiosus general transcription factor TFE-alpha
分子名称: Transcription factor E
著者Murakami, K.S, Jun, S.H.
登録日2019-07-01
公開日2020-07-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6PWW
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BU of 6pww by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5 and WDR5 bound to the nucleosome
分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
6PWX
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BU of 6pwx by Molmil
Cryo-EM structure of RbBP5 bound to the nucleosome
分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
6PWV
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BU of 6pwv by Molmil
Cryo-EM structure of MLL1 core complex bound to the nucleosome
分子名称: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
7XW2
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BU of 7xw2 by Molmil
Cryo-EM structure of human DICER-pre-miRNA in a dicing state
分子名称: CALCIUM ION, Endoribonuclease Dicer, RNA (73-MER)
著者Lee, H, Roh, S.-H.
登録日2022-05-26
公開日2023-03-08
最終更新日2023-03-22
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structure of the human DICER-pre-miRNA complex in a dicing state.
Nature, 615, 2023
7XW3
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BU of 7xw3 by Molmil
Cryo-EM structure of an apo-form of human DICER
分子名称: Endoribonuclease Dicer
著者Lee, H, Roh, S.-H.
登録日2022-05-26
公開日2023-03-08
最終更新日2023-03-22
実験手法ELECTRON MICROSCOPY (4.04 Å)
主引用文献Structure of the human DICER-pre-miRNA complex in a dicing state.
Nature, 615, 2023
5Y86
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BU of 5y86 by Molmil
Crystal structure of kinase
分子名称: 1,2-ETHANEDIOL, 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, Dual specificity tyrosine-phosphorylation-regulated kinase 3, ...
著者Kim, K.L, Cha, J.S, Cho, Y.S, Kim, H.Y, Chang, N.P, Cho, H.S.
登録日2017-08-18
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Human Dual-Specificity Tyrosine-Regulated Kinase 3 Reveals New Structural Features and Insights into its Auto-phosphorylation
J. Mol. Biol., 430, 2018
1LAN
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BU of 1lan by Molmil
LEUCINE AMINOPEPTIDASE COMPLEX WITH L-LEUCINAL
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, LEUCINE, LEUCINE AMINOPEPTIDASE, ...
著者Straeter, N, Lipscomb, W.N.
登録日1995-08-11
公開日1995-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Two-metal ion mechanism of bovine lens leucine aminopeptidase: active site solvent structure and binding mode of L-leucinal, a gem-diolate transition state analogue, by X-ray crystallography.
Biochemistry, 34, 1995
1LAM
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BU of 1lam by Molmil
LEUCINE AMINOPEPTIDASE (UNLIGATED)
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CARBONATE ION, LEUCINE AMINOPEPTIDASE, ...
著者Straeter, N, Lipscomb, W.N.
登録日1995-08-11
公開日1995-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Two-metal ion mechanism of bovine lens leucine aminopeptidase: active site solvent structure and binding mode of L-leucinal, a gem-diolate transition state analogue, by X-ray crystallography.
Biochemistry, 34, 1995
3OUM
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BU of 3oum by Molmil
Crystal Structure of toxoflavin-degrading enzyme in complex with toxoflavin
分子名称: 1,6-dimethylpyrimido[5,4-e][1,2,4]triazine-5,7(1H,6H)-dione, MANGANESE (II) ION, toxoflavin-degrading enzyme
著者Kim, M.I, Rhee, S.
登録日2010-09-15
公開日2011-08-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional analysis of phytotoxin toxoflavin-degrading enzyme
Plos One, 6, 2011
3OUL
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BU of 3oul by Molmil
Crystal Structure of toxoflavin-degrading enzyme in a substrate-free form
分子名称: MANGANESE (II) ION, Toxoflavin-degrading enzyme
著者Kim, M.I, Rhee, S.
登録日2010-09-15
公開日2011-08-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and functional analysis of phytotoxin toxoflavin-degrading enzyme
Plos One, 6, 2011
7EC3
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BU of 7ec3 by Molmil
Crystal structure of SdgB (complexed with UDP, GlcNAc, and Glycosylated peptide)
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-35)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-65)]5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC6
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BU of 7ec6 by Molmil
Crystal structure of SdgB (complexed with peptides)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC7
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BU of 7ec7 by Molmil
Crystal structure of SdgB (complexed with phosphate ions)
分子名称: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC1
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BU of 7ec1 by Molmil
Crystal structure of SdgB (ligand-free form)
分子名称: GLYCEROL, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2021-03-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7T63
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BU of 7t63 by Molmil
Crystal structure of a delta 6 18:0-ACP desaturase from Thunbergia laurifolia
分子名称: DESATURASE, FE (II) ION
著者Liu, Q, Chai, J, Shanklin, J.
登録日2021-12-13
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Divergent evolution of extreme production of variant plant monounsaturated fatty acids.
Proc.Natl.Acad.Sci.USA, 119, 2022
4QBS
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BU of 4qbs by Molmil
Crystal structure of DNMT3a ADD domain E545R mutant bound to H3T3ph peptide
分子名称: DNA (cytosine-5)-methyltransferase 3A, Histone H3, SULFATE ION, ...
著者Wang, H, Li, H.
登録日2014-05-08
公開日2015-05-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
4QBR
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BU of 4qbr by Molmil
Crystal structure of DNMT3a ADD domain G550D mutant bound to H3 peptide
分子名称: DNA (cytosine-5)-methyltransferase 3A, Histone H3, ZINC ION
著者Wang, H, Li, H.
登録日2014-05-08
公開日2015-05-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
4QBQ
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BU of 4qbq by Molmil
Crystal structure of DNMT3a ADD domain bound to H3 peptide
分子名称: DNA (cytosine-5)-methyltransferase 3A, Histone H3, ZINC ION
著者Li, H, Patel, D.J.
登録日2014-05-08
公開日2015-05-13
実験手法X-RAY DIFFRACTION (2.406 Å)
主引用文献Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
7YC5
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BU of 7yc5 by Molmil
Cryo-EM structure of SARS-CoV-2 spike in complex with K202.B bispecific antibody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain from K202.B, bispecific antibody, ...
著者Yoo, Y, Cho, H.S.
登録日2022-06-30
公開日2023-07-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Novel bispecific human antibody platform specifically targeting a fully open spike conformation potently neutralizes multiple SARS-CoV-2 variants.
Antiviral Res., 212, 2023
6LBX
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BU of 6lbx by Molmil
Crystal structure of HER2 Domain IV and Rb-H2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-2, Repebody (Rb-H2)
著者Cho, H.S, Cha, J.S.
登録日2019-11-15
公開日2020-11-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Computationally-guided design and affinity improvement of a protein binder targeting a specific site on HER2
Comput Struct Biotechnol J, 19, 2021
4EN1
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BU of 4en1 by Molmil
The 1.62A structure of a FRET-optimized Cerulean Fluorescent Protein
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Watkins, J.L.
登録日2012-04-12
公開日2013-04-24
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The 1.6 A resolution structure of a FRET-optimized Cerulean fluorescent protein.
Acta Crystallogr.,Sect.D, 69, 2013
6VAT
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BU of 6vat by Molmil
Structure of the periplasmic domain of YejM from Salmonella typhimurium
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, ETHANOLAMINE, ...
著者Gabale, U, Ressl, S.
登録日2019-12-17
公開日2020-08-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The essential inner membrane protein YejM is a metalloenzyme.
Sci Rep, 10, 2020

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件を2024-06-12に公開中

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