Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8HEF
DownloadVisualize
BU of 8hef by Molmil
The Crystal structure of deuterated S-217622 (Ensitrelvir) bound to the main protease (3CLpro/Mpro) of SARS-CoV-2
分子名称: 3C-like proteinase, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione, GLYCEROL
著者Yan, M, Zhang, H.
登録日2022-11-08
公開日2023-04-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Synthesis of deuterated S-217622 (Ensitrelvir) with antiviral activity against coronaviruses including SARS-CoV-2.
Antiviral Res., 213, 2023
2NMP
DownloadVisualize
BU of 2nmp by Molmil
Crystal structure of human Cystathionine gamma lyase
分子名称: Cystathionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE
著者Karlberg, T, Uppenberg, J, Arrowsmith, C, Berglund, H, Busam, R.D, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Hogbom, M, Johansson, I, Kotenyova, T, Magnusdottir, A, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, van-den-Berg, S, Wallden, K, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
登録日2006-10-23
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the inhibition mechanism of human cystathionine gamma-lyase, an enzyme responsible for the production of H(2)S
J.Biol.Chem., 284, 2009
5I9E
DownloadVisualize
BU of 5i9e by Molmil
Crystal structure of a nuclear actin ternary complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, Actin-related protein 4, ...
著者Chen, Z, Cao, T.
登録日2016-02-20
公開日2016-07-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a nuclear actin ternary complex.
Proc.Natl.Acad.Sci.USA, 113, 2016
5UHT
DownloadVisualize
BU of 5uht by Molmil
Structure of the Thermotoga maritima HK853-BeF3-RR468 complex at pH 5.0
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Liu, Y, Rose, J, Jiang, L, Zhou, P.
登録日2017-01-12
公開日2017-12-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献A pH-gated conformational switch regulates the phosphatase activity of bifunctional HisKA-family histidine kinases.
Nat Commun, 8, 2017
4Z8I
DownloadVisualize
BU of 4z8i by Molmil
Crystal structure of Branchiostoma belcheri tsingtauense peptidoglycan recognition protein 3
分子名称: ZINC ION, peptidoglycan recognition protein 3
著者Wang, W.J, Cheng, W, Jiang, Y.L, Luo, M, Cao, D.D, Chi, C.B, Yang, H.B, Chen, Y, Zhou, C.Z.
登録日2015-04-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Activity Augmentation of Amphioxus Peptidoglycan Recognition Protein BbtPGRP3 via Fusion with a Chitin Binding Domain
Plos One, 10, 2015
2R0U
DownloadVisualize
BU of 2r0u by Molmil
Crystal Structure of Chek1 in Complex with Inhibitor 54
分子名称: 6-(3-aminopropyl)-4-(3-hydroxyphenyl)-9-(1H-pyrazol-4-yl)benzo[h]isoquinolin-1(2H)-one, Serine/threonine-protein kinase Chk1
著者Yan, Y, Ikuta, M.
登録日2007-08-21
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Synthesis and evaluation of substituted benzoisoquinolinones as potent inhibitors of Chk1 kinase.
Bioorg.Med.Chem.Lett., 17, 2007
4R83
DownloadVisualize
BU of 4r83 by Molmil
Crystal structure of Sialyltransferase from Photobacterium damsela
分子名称: CALCIUM ION, Sialyltransferase 0160
著者Fisher, A.J, Chen, X, Li, Y, Huynh, N.
登録日2014-08-29
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystal structures of sialyltransferase from Photobacterium damselae.
Febs Lett., 588, 2014
4R9V
DownloadVisualize
BU of 4r9v by Molmil
Crystal structure of sialyltransferase from photobacterium damselae, residues 113-497 corresponding to the gt-b domain
分子名称: CALCIUM ION, Sialyltransferase 0160
著者Li, Y, Huynh, N, Chen, X, Fisher, A.J.
登録日2014-09-08
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of sialyltransferase from Photobacterium damselae.
Febs Lett., 588, 2014
4R84
DownloadVisualize
BU of 4r84 by Molmil
Crystal structure of Sialyltransferase from Photobacterium damsela with CMP-3F(a)Neu5Ac bound
分子名称: CALCIUM ION, CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID, Sialyltransferase 0160
著者Fisher, A.J, Chen, X, Li, Y, Huynh, N.
登録日2014-08-29
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of sialyltransferase from Photobacterium damselae.
Febs Lett., 588, 2014
6AZR
DownloadVisualize
BU of 6azr by Molmil
Crystal structure of the T264A HK853cp-BeF3-RR468 complex
分子名称: Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Rose, J, Zhou, P.
登録日2017-09-11
公開日2017-12-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.628 Å)
主引用文献A pH-gated conformational switch regulates the phosphatase activity of bifunctional HisKA-family histidine kinases.
Nat Commun, 8, 2017
5XJN
DownloadVisualize
BU of 5xjn by Molmil
cytochrome P450 CREJ in complex with (4-ethylphenyl) dihydrogen phosphate
分子名称: (4-ethylphenyl) dihydrogen phosphate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Dong, S, Du, L, Li, S, Feng, Y.
登録日2017-05-03
公開日2017-07-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Selective oxidation of aliphatic C-H bonds in alkylphenols by a chemomimetic biocatalytic system
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5CRL
DownloadVisualize
BU of 5crl by Molmil
Crystal Structure of the Transcription Activator Tn501 MerR in Complex with Mercury (II)
分子名称: MERCURY (II) ION, Mercuric resistance operon regulatory protein
著者Wang, D, Gan, J.H, Chen, H.
登録日2015-07-23
公開日2016-09-07
最終更新日2023-04-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Analysis of the Hg(II)-Regulatory Protein Tn501 MerR from Pseudomonas aeruginosa.
Sci Rep, 6, 2016
1AKP
DownloadVisualize
BU of 1akp by Molmil
SEQUENTIAL 1H,13C AND 15N NMR ASSIGNMENTS AND SOLUTION CONFORMATION OF APOKEDARCIDIN
分子名称: APOKEDARCIDIN
著者Constantine, K.L, Colson, K.L, Wittekind, M, Friedrichs, M.S, Zein, N, Tuttle, J, Langley, D.R, Leet, J.E, Schroeder, D.R, Lam, K.S, Farmer II, B.T, Metzler, W.J, Bruccoleri, R.E, Mueller, L.
登録日1994-06-20
公開日1994-08-31
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Sequential 1H, 13C, and 15N NMR assignments and solution conformation of apokedarcidin.
Biochemistry, 33, 1994
4GRB
DownloadVisualize
BU of 4grb by Molmil
Casein kinase 2 (CK2) bound to inhibitor
分子名称: 5-(2-{[4-(dimethylcarbamoyl)phenyl]amino}-4-methoxypyrimidin-5-yl)thiophene-3-carboxylic acid, CHLORIDE ION, Casein kinase II subunit alpha
著者Larsen, N.A, Dowling, J.E, Ferguson, A.D.
登録日2012-08-24
公開日2013-08-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure and Property Based Design of Pyrazolo[1,5-a]pyrimidine Inhibitors of CK2 Kinase with Activity in Vivo.
ACS Med Chem Lett, 4, 2013
1COU
DownloadVisualize
BU of 1cou by Molmil
ANTICOAGULANT PROTEIN FROM THE NEMATODE ANCYLOSTOMA CANINUM
分子名称: PROTEIN (NEMATODE ANTICOAGULANT PROTEIN C2)
著者Duggan, B.M, Dyson, H.J, Wright, P.E.
登録日1999-05-28
公開日1999-10-20
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Inherent flexibility in a potent inhibitor of blood coagulation, recombinant nematode anticoagulant protein c2.
Eur.J.Biochem., 265, 1999
7XJP
DownloadVisualize
BU of 7xjp by Molmil
Cryo-EM structure of EDS1 and SAG101 with ATP-APDR
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ADENOSINE-5-DIPHOSPHORIBOSE, ISOPROPYL ALCOHOL, ...
著者Huang, S.J, Jia, A.L, Han, Z.F, Chai, J.J.
登録日2022-04-18
公開日2022-07-20
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献TIR-catalyzed ADP-ribosylation reactions produce signaling molecules for plant immunity.
Science, 377, 2022
3V5Q
DownloadVisualize
BU of 3v5q by Molmil
Discovery of a selective TRK Inhibitor with efficacy in rodent cancer tumor models
分子名称: 1-(3-{[(3Z)-2-oxo-3-(1H-pyrrol-2-ylmethylidene)-2,3-dihydro-1H-indol-6-yl]amino}phenyl)-3-[3-(trifluoromethyl)phenyl]urea, CHLORIDE ION, NT-3 growth factor receptor
著者Kreusch, A.
登録日2011-12-16
公開日2012-02-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2001 Å)
主引用文献Discovery of GNF-5837, a Selective TRK Inhibitor with Efficacy in Rodent Cancer Tumor Models.
ACS Med Chem Lett, 3, 2012
8IKX
DownloadVisualize
BU of 8ikx by Molmil
An Arabidopsis polygalacturonase PGLR
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pectin lyase-like superfamily protein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Xiao, Y, Chai, J.
登録日2023-03-01
公開日2024-02-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A plant mechanism of hijacking pathogen virulence factors to trigger innate immunity.
Science, 383, 2024
2M8T
DownloadVisualize
BU of 2m8t by Molmil
Solution NMR structure of the V209M variant of the human prion protein (residues 90-231)
分子名称: Major prion protein
著者Mills, J.L, Surewicz, K, Surewicz, W, Soennichsen, F.D.
登録日2013-05-28
公開日2013-09-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Thermodynamic Stabilization of the Folded Domain of Prion Protein Inhibits Prion Infection in Vivo.
Cell Rep, 4, 2013
8IKW
DownloadVisualize
BU of 8ikw by Molmil
A complex structure of PGIP-PG
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Endo-polygalacturonase, ...
著者Xiao, Y, Chai, J.
登録日2023-03-01
公開日2024-02-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献A plant mechanism of hijacking pathogen virulence factors to trigger innate immunity.
Science, 383, 2024
2OGP
DownloadVisualize
BU of 2ogp by Molmil
Solution structure of the second PDZ domain of Par-3
分子名称: Partitioning-defective 3 homolog
著者Feng, W, Wu, H, Chen, J, Chan, L.-N, Zhang, M.
登録日2007-01-07
公開日2007-12-25
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献PDZ domains of par-3 as potential phosphoinositide signaling integrators
Mol.Cell, 28, 2007
7CCF
DownloadVisualize
BU of 7ccf by Molmil
Mechanism insights on steroselective oxidation of phosphorylated ethylphenols with cytochrome P450 CreJ
分子名称: (3-ethylphenyl) dihydrogen phosphate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Dong, S, Du, L, Li, S.Y, Feng, Y.G.
登録日2020-06-17
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for Selective Oxidation of Phosphorylated Ethylphenols by Cytochrome P450 Monooxygenase CreJ.
Appl.Environ.Microbiol., 87, 2021
7CJS
DownloadVisualize
BU of 7cjs by Molmil
structure of aquaporin
分子名称: Aquaporin NIP2-1, CHOLESTEROL HEMISUCCINATE, SODIUM ION, ...
著者Saitoh, Y, Ma, J.F, Suga, M.
登録日2020-07-13
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for high selectivity of a rice silicon channel Lsi1.
Nat Commun, 12, 2021
7E34
DownloadVisualize
BU of 7e34 by Molmil
Crystal structure of SUN1-Speedy A-CDK2
分子名称: Cyclin-dependent kinase 2, GLYCEROL, SUN domain-containing protein 1, ...
著者Chen, Y, Huang, C, Wu, J, Lei, M.
登録日2021-02-08
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献The SUN1-SPDYA interaction plays an essential role in meiosis prophase I.
Nat Commun, 12, 2021
7WN2
DownloadVisualize
BU of 7wn2 by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG53 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-01-17
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon