5DGY
 
 | | Crystal structure of rhodopsin bound to visual arrestin | | 分子名称: | Endolysin,Rhodopsin,S-arrestin | | 著者 | Zhou, X.E, Gao, X, Kang, Y, He, Y, de Waal, P.W, Suino-Powell, K.M, Wang, M, Melcher, K, Xu, H.E. | | 登録日 | 2015-08-28 | | 公開日 | 2016-03-23 | | 最終更新日 | 2023-09-27 | | 実験手法 | X-RAY DIFFRACTION (7.7 Å) | | 主引用文献 | X-ray laser diffraction for structure determination of the rhodopsin-arrestin complex.
Sci Data, 3, 2016
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2LD7
 | | Solution structure of the mSin3A PAH3-SAP30 SID complex | | 分子名称: | Histone deacetylase complex subunit SAP30, Paired amphipathic helix protein Sin3a | | 著者 | Xie, T, He, Y, Korkeamaki, H, Zhang, Y, Imhoff, R, Lohi, O, Radhakrishnan, I. | | 登録日 | 2011-05-16 | | 公開日 | 2011-06-15 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure of the 30-kDa Sin3-associated protein (SAP30) in complex with the mammalian Sin3A corepressor and its role in nucleic acid binding.
J.Biol.Chem., 286, 2011
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2VSN
 | | Structure and topological arrangement of an O-GlcNAc transferase homolog: insight into molecular control of intracellular glycosylation | | 分子名称: | URIDINE-5'-DIPHOSPHATE, XCOGT | | 著者 | Martinez-Fleites, C, Macauley, M.S, He, Y, Shen, D, Vocadlo, D, Davies, G.J. | | 登録日 | 2008-04-28 | | 公開日 | 2008-06-10 | | 最終更新日 | 2024-05-08 | | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | | 主引用文献 | Structure of an O-Glcnac Transferase Homolog Provides Insight Into Intracellular Glycosylation.
Nat.Struct.Mol.Biol., 15, 2008
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6CND
 | | Yeast RNA polymerase III natural open complex (nOC) | | 分子名称: | DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... | | 著者 | Han, Y, He, Y. | | 登録日 | 2018-03-08 | | 公開日 | 2018-08-22 | | 最終更新日 | 2020-01-08 | | 実験手法 | ELECTRON MICROSCOPY (4.8 Å) | | 主引用文献 | Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
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6CNB
 | | Yeast RNA polymerase III initial transcribing complex | | 分子名称: | DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... | | 著者 | Han, Y, He, Y. | | 登録日 | 2018-03-08 | | 公開日 | 2018-08-22 | | 最終更新日 | 2020-01-08 | | 実験手法 | ELECTRON MICROSCOPY (4.1 Å) | | 主引用文献 | Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
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5ZMM
 | | Structure of the Type IV phosphorothioation-dependent restriction endonuclease ScoMcrA | | 分子名称: | SULFATE ION, Uncharacterized protein McrA, ZINC ION | | 著者 | Liu, G, Fu, W, Zhang, Z, He, Y, Yu, H, Zhao, Y, Deng, Z, Wu, G, He, X. | | 登録日 | 2018-04-04 | | 公開日 | 2018-09-26 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (3.15 Å) | | 主引用文献 | Structural basis for the recognition of sulfur in phosphorothioated DNA.
Nat Commun, 9, 2018
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5ZMN
 | | Sulfur binding domain and SRA domain of ScoMcrA complexed with phosphorothioated DNA | | 分子名称: | DNA (5'-D(*CP*CP*CP*GP*(GS)P*CP*CP*GP*GP*G)-3'), SULFATE ION, Uncharacterized protein McrA | | 著者 | Liu, G, Fu, W, Zhang, Z, He, Y, Yu, H, Zhao, Y, Deng, Z, Wu, G, He, X. | | 登録日 | 2018-04-04 | | 公開日 | 2018-09-26 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (3.29 Å) | | 主引用文献 | Structural basis for the recognition of sulfur in phosphorothioated DNA.
Nat Commun, 9, 2018
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6CNC
 | | Yeast RNA polymerase III open complex | | 分子名称: | DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... | | 著者 | Han, Y, He, Y. | | 登録日 | 2018-03-08 | | 公開日 | 2018-08-22 | | 最終更新日 | 2020-01-08 | | 実験手法 | ELECTRON MICROSCOPY (4.1 Å) | | 主引用文献 | Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
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6CNF
 | | Yeast RNA polymerase III elongation complex | | 分子名称: | DNA (79-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... | | 著者 | Han, Y, He, Y. | | 登録日 | 2018-03-08 | | 公開日 | 2018-08-22 | | 最終更新日 | 2020-01-08 | | 実験手法 | ELECTRON MICROSCOPY (4.5 Å) | | 主引用文献 | Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
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4LYB
 | | CdS within a lysoyzme single crystal | | 分子名称: | CADMIUM ION, Lysozyme C | | 著者 | Wei, H, House, S, Wu, J, Zhang, J, Wang, Z, He, Y, Gao, Y.-G, Robinson, H, Li, W, Zuo, J.-M, Robertson, I.M, Lu, Y. | | 登録日 | 2013-07-30 | | 公開日 | 2015-02-25 | | 実験手法 | X-RAY DIFFRACTION (1.21 Å) | | 主引用文献 | Enhanced and tunable fluorescent quantum dots within a single crystal of protein
TO BE PUBLISHED
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6V85
 | | Parainfluenza virus 5 L-P complex | | 分子名称: | Phosphoprotein, RNA-directed RNA polymerase L, ZINC ION | | 著者 | Abdella, R, He, Y. | | 登録日 | 2019-12-10 | | 公開日 | 2020-02-19 | | 最終更新日 | 2024-03-06 | | 実験手法 | ELECTRON MICROSCOPY (4.38 Å) | | 主引用文献 | Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation.
Proc.Natl.Acad.Sci.USA, 117, 2020
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6V86
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6VAG
 | | Crystal structure of the oligomerization domain of phosphoprotein from parainfluenza virus 5 | | 分子名称: | GLYCEROL, Phosphoprotein | | 著者 | Aggarwal, M, Abdella, R, He, Y, Lamb, R.A. | | 登録日 | 2019-12-17 | | 公開日 | 2020-02-19 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | | 主引用文献 | Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation.
Proc.Natl.Acad.Sci.USA, 117, 2020
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4LYC
 | | Cd ions within a lysoyzme single crystal | | 分子名称: | CADMIUM ION, Lysozyme C | | 著者 | Wei, H, House, S, Wu, J, Zhang, J, Wang, Z, He, Y, Gao, Y.-G, Robinson, H, Li, W, Zuo, J.-M, Robertson, I.M, Lu, Y. | | 登録日 | 2013-07-30 | | 公開日 | 2015-02-25 | | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | | 主引用文献 | Enhanced and tunable fluorescent quantum dots within a single crystal of protein
TO BE PUBLISHED
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7LBM
 | | Structure of the human Mediator-bound transcription pre-initiation complex | | 分子名称: | CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... | | 著者 | Abdella, R, Talyzina, A, He, Y. | | 登録日 | 2021-01-08 | | 公開日 | 2021-03-24 | | 最終更新日 | 2021-04-14 | | 実験手法 | ELECTRON MICROSCOPY (4.8 Å) | | 主引用文献 | Structure of the human Mediator-bound transcription preinitiation complex.
Science, 372, 2021
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8EZB
 | | NHEJ Long-range complex with ATP | | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, DNA (30-MER), DNA (31-MER), ... | | 著者 | Chen, S, He, Y. | | 登録日 | 2022-10-31 | | 公開日 | 2023-06-14 | | 最終更新日 | 2024-06-19 | | 実験手法 | ELECTRON MICROSCOPY (8.9 Å) | | 主引用文献 | Cryo-EM visualization of DNA-PKcs structural intermediates in NHEJ.
Sci Adv, 9, 2023
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8EZ9
 | | Dimeric complex of DNA-PKcs | | 分子名称: | DNA-dependent protein kinase catalytic subunit, unknown region of DNA-PKcs | | 著者 | Chen, S, He, Y. | | 登録日 | 2022-10-31 | | 公開日 | 2023-06-14 | | 最終更新日 | 2024-06-19 | | 実験手法 | ELECTRON MICROSCOPY (5.67 Å) | | 主引用文献 | Cryo-EM visualization of DNA-PKcs structural intermediates in NHEJ.
Sci Adv, 9, 2023
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8EZA
 | | NHEJ Long-range complex with PAXX | | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, DNA (30-MER), DNA (31-MER), ... | | 著者 | Chen, S, He, Y. | | 登録日 | 2022-10-31 | | 公開日 | 2023-06-14 | | 最終更新日 | 2024-06-19 | | 実験手法 | ELECTRON MICROSCOPY (4.39 Å) | | 主引用文献 | Cryo-EM visualization of DNA-PKcs structural intermediates in NHEJ.
Sci Adv, 9, 2023
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8GA8
 | | Structure of the yeast (HDAC) Rpd3L complex | | 分子名称: | Histone deacetylase RPD3, Transcriptional regulatory protein DEP1, Transcriptional regulatory protein PHO23, ... | | 著者 | Patel, A.B, Radhakrishnan, I, He, Y. | | 登録日 | 2023-02-22 | | 公開日 | 2023-07-12 | | 最終更新日 | 2024-06-19 | | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | | 主引用文献 | Cryo-EM structure of the Saccharomyces cerevisiae Rpd3L histone deacetylase complex.
Nat Commun, 14, 2023
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2KFW
 | | Solution structure of full-length SlyD from E.coli | | 分子名称: | FKBP-type peptidyl-prolyl cis-trans isomerase slyD | | 著者 | Martino, L, He, Y, Hands-Taylor, K.L, Valentine, E.R, Kelly, G, Giancola, C, Conte, M.R. | | 登録日 | 2009-02-28 | | 公開日 | 2009-09-15 | | 最終更新日 | 2024-05-01 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The interaction of the Escherichia coli protein SlyD with nickel ions illuminates the mechanism of regulation of its peptidyl-prolyl isomerase activity.
Febs J., 276, 2009
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5DPL
 | | The structure of PKMT2 from Rickettsia typhi in complex with AdoHcy | | 分子名称: | S-ADENOSYL-L-HOMOCYSTEINE, protein lysine methyltransferase 2 | | 著者 | Noinaj, N, Abeykoon, A, He, Y, Yang, D.C, Buchanan, S.K. | | 登録日 | 2015-09-12 | | 公開日 | 2016-08-10 | | 最終更新日 | 2024-03-06 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | Structural Insights into Substrate Recognition and Catalysis in Outer Membrane Protein B (OmpB) by Protein-lysine Methyltransferases from Rickettsia.
J.Biol.Chem., 291, 2016
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5DNK
 | | The structure of PKMT1 from Rickettsia prowazekii in complex with AdoHcy | | 分子名称: | S-ADENOSYL-L-HOMOCYSTEINE, protein lysine methyltransferase 1 | | 著者 | Noinaj, N, Abeykoon, A, He, Y, Yang, D.C, Buchanan, S.K. | | 登録日 | 2015-09-10 | | 公開日 | 2016-08-10 | | 最終更新日 | 2024-03-06 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structural Insights into Substrate Recognition and Catalysis in Outer Membrane Protein B (OmpB) by Protein-lysine Methyltransferases from Rickettsia.
J.Biol.Chem., 291, 2016
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6LW3
 | | Crystal structure of RuvC from Pseudomonas aeruginosa | | 分子名称: | Crossover junction endodeoxyribonuclease RuvC | | 著者 | Hu, Y, He, Y, Lin, Z. | | 登録日 | 2020-02-07 | | 公開日 | 2020-02-26 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | | 主引用文献 | Biochemical and structural characterization of the Holliday junction resolvase RuvC from Pseudomonas aeruginosa.
Biochem.Biophys.Res.Commun., 525, 2020
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5YB3
 | | Crystal structure of HP23L/N36 | | 分子名称: | Envelope glycoprotein, HP23L | | 著者 | Zhang, X, Wang, X, He, Y. | | 登録日 | 2017-09-03 | | 公開日 | 2018-02-28 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (2.043 Å) | | 主引用文献 | Structural Insights into the Mechanisms of Action of Short-Peptide HIV-1 Fusion Inhibitors Targeting the Gp41 Pocket
Front Cell Infect Microbiol, 8, 2018
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5YB2
 | | Crystal structure of LP-11/N44 | | 分子名称: | Envelope glycoprotein, LP-11 | | 著者 | Zhang, X, Wang, X, He, Y. | | 登録日 | 2017-09-03 | | 公開日 | 2018-02-28 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (3.8 Å) | | 主引用文献 | Structural Insights into the Mechanisms of Action of Short-Peptide HIV-1 Fusion Inhibitors Targeting the Gp41 Pocket
Front Cell Infect Microbiol, 8, 2018
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