Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5XHS
DownloadVisualize
BU of 5xhs by Molmil
Crystal structure of SIRT5 complexed with a fluorogenic small-molecule substrate SuBKA
分子名称: (2S)-2-azanyl-6-[(4-hydroxy-4-oxo-butanoyl)amino]hexanoic acid, 7-AMINO-4-METHYL-CHROMEN-2-ONE, NAD-dependent protein deacylase sirtuin-5, ...
著者Yu, Y, Li, B, Chen, Q.
登録日2017-04-24
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Interactions between sirtuins and fluorogenic small-molecule substrates offer insights into inhibitor design
Rsc Adv, 7, 2017
8HDK
DownloadVisualize
BU of 8hdk by Molmil
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine and glutamate (minor class in symmetry)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, ...
著者Zhang, M, Zhang, J, Guo, F, Li, Y, Zhu, S.
登録日2022-11-04
公開日2023-03-29
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
8EZ8
DownloadVisualize
BU of 8ez8 by Molmil
Structure of 3C08 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of influenza virus neuraminidase antibody 3C08, Light chain of influenza virus neuraminidase antibody 3C08, ...
著者Mou, Z, Lei, R, Wu, N.C, Dai, X.
登録日2022-10-31
公開日2023-11-08
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Leveraging vaccination-induced protective antibodies to define conserved epitopes on influenza N2 neuraminidase.
Immunity, 56, 2023
8EZ7
DownloadVisualize
BU of 8ez7 by Molmil
Structure of 1F04 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of influenza virus neuraminidase antibody 1F04, Light chain of influenza virus neuraminidase antibody 1F04, ...
著者Mou, Z, Lei, R, Wu, N.C, Dai, X.
登録日2022-10-31
公開日2023-11-08
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Leveraging vaccination-induced protective antibodies to define conserved epitopes on influenza N2 neuraminidase.
Immunity, 56, 2023
8EZ3
DownloadVisualize
BU of 8ez3 by Molmil
Structure of 3A10 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of influenza virus neuraminidase antibody 3A10, Light chain of influenza virus neuraminidase antibody 3A10, ...
著者Mou, Z, Lei, R, Wu, N.C, Dai, X.
登録日2022-10-31
公開日2023-11-08
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Leveraging vaccination-induced protective antibodies to define conserved epitopes on influenza N2 neuraminidase.
Immunity, 56, 2023
8ETN
DownloadVisualize
BU of 8etn by Molmil
The X-ray Crystal Structure of Tri-Ketone Dioxygenase from Rice
分子名称: Tri-Ketone Dioxygenase
著者Rydel, T.J, Duda, D, Zheng, M, Duff, S.M.G.
登録日2022-10-17
公開日2023-12-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Structural and functional characterization of triketone dioxygenase from Oryza Sativa.
Biochim Biophys Acta Gen Subj, 1868, 2023
7CYP
DownloadVisualize
BU of 7cyp by Molmil
Complex of SARS-CoV-2 spike trimer with its neutralizing antibody HB27
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of HB27, ...
著者Wang, X, Zhu, L.
登録日2020-09-04
公開日2021-06-09
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Double lock of a potent human therapeutic monoclonal antibody against SARS-CoV-2.
Natl Sci Rev, 8, 2021
4QO4
DownloadVisualize
BU of 4qo4 by Molmil
co-crystal structure of MDM2 (17-111) with compound 16, {(3R,5R,6S)-5-(3-CHLOROPHENYL)-6-(4-CHLOROPHENYL)-1-[(1S)-1-(6-CYCLOPROPYLPYRIDIN-2-YL)PROPYL]-3-METHYL-2-OXOPIPERIDIN-3-YL}ACETIC ACID
分子名称: E3 ubiquitin-protein ligase Mdm2, {(3R,5R,6S)-5-(3-chlorophenyl)-6-(4-chlorophenyl)-1-[(1S)-1-(6-cyclopropylpyridin-2-yl)propyl]-3-methyl-2-oxopiperidin-3-yl}acetic acid
著者Huang, X.
登録日2014-06-19
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery of Potent and Simplified Piperidinone-Based Inhibitors of the MDM2-p53 Interaction.
ACS Med Chem Lett, 5, 2014
8H3T
DownloadVisualize
BU of 8h3t by Molmil
The crystal structure of AlpH
分子名称: AlpH, GLYCEROL
著者Zhao, Y, Li, M, Jiang, M, Pan, L.F.
登録日2022-10-09
公開日2023-09-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.866 Å)
主引用文献O-methyltransferase-like enzyme catalyzed diazo installation in polyketide biosynthesis.
Nat Commun, 14, 2023
6AKW
DownloadVisualize
BU of 6akw by Molmil
Crystal structure of RNA dioxygenase bound with an inhibitor
分子名称: 2-OXOGLUTARIC ACID, 2-[[2,6-bis(chloranyl)-4-(3,5-dimethyl-1,2-oxazol-4-yl)phenyl]amino]benzoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO
著者Yang, C.-G, Huang, Y, Gan, J.
登録日2018-09-04
公開日2019-05-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Small-Molecule Targeting of Oncogenic FTO Demethylase in Acute Myeloid Leukemia.
Cancer Cell, 35, 2019
7E5R
DownloadVisualize
BU of 7e5r by Molmil
SARS-CoV-2 S trimer with three-antibody cocktail complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FC05 heavy chain, FC05 light chain, ...
著者Sun, Y, Wang, L, Wang, N, Feng, R, Wang, X.
登録日2021-02-20
公開日2021-10-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure-based development of three- and four-antibody cocktails against SARS-CoV-2 via multiple mechanisms.
Cell Res., 31, 2021
3S36
DownloadVisualize
BU of 3s36 by Molmil
Structural basis for the function of two anti-VEGF receptor antibodies
分子名称: 1121B heavy chain, 1121B light chain, Vascular endothelial growth factor receptor 2
著者Franklin, M.C.
登録日2011-05-17
公開日2011-08-24
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The Structural Basis for the Function of Two Anti-VEGF Receptor 2 Antibodies.
Structure, 19, 2011
8FXU
DownloadVisualize
BU of 8fxu by Molmil
Thermoanaerobacter thermosaccharolyticum periplasmic Glucose-Binding Protein glucose complex: Badan conjugate attached at F17C
分子名称: 2-bromo-1-[6-(dimethylamino)naphthalen-2-yl]ethan-1-one, CALCIUM ION, CHLORIDE ION, ...
著者Allert, M.J, Kumar, S, Beese, L.S, Hellinga, H.W.
登録日2023-01-25
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Chromophore carbonyl twisting in fluorescent biosensors encodes direct readout of protein conformations with multicolor switching.
Commun Chem, 6, 2023
7WJ6
DownloadVisualize
BU of 7wj6 by Molmil
Crystal Structure of the Kinase Domain of a Class III Lanthipeptide Synthetase CurKC
分子名称: MAGNESIUM ION, Serine/threonine protein kinase
著者Huang, S, Wang, H.
登録日2022-01-05
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Discovery of a Unique Structural Motif in Lanthipeptide Synthetases for Substrate Binding and Interdomain Interactions.
Angew.Chem.Int.Ed.Engl., 61, 2022
7WJ7
DownloadVisualize
BU of 7wj7 by Molmil
Crystal Structure of the Kinase Domain with Adenosine of a Class III Lanthipeptide Synthetase CurKC
分子名称: 2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, Serine/threonine protein kinase
著者Huang, S, Wang, H.
登録日2022-01-05
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Discovery of a Unique Structural Motif in Lanthipeptide Synthetases for Substrate Binding and Interdomain Interactions.
Angew.Chem.Int.Ed.Engl., 61, 2022
3S35
DownloadVisualize
BU of 3s35 by Molmil
Structural basis for the function of two anti-VEGF receptor antibodies
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6.64 Fab heavy chain, ...
著者Franklin, M.C.
登録日2011-05-17
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Structural Basis for the Function of Two Anti-VEGF Receptor 2 Antibodies.
Structure, 19, 2011
8IFG
DownloadVisualize
BU of 8ifg by Molmil
Cryo-EM structure of the Clr6S (Clr6-HDAC) complex from S. pombe
分子名称: Chromatin modification-related protein eaf3, Cph1, Cph2, ...
著者Zhang, H.Q, Wang, X, Wang, Y.N, Liu, S.M, Zhang, Y, Xu, K, Ji, L.T, Kornberg, R.D.
登録日2023-02-17
公開日2024-01-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Class I histone deacetylase complex: Structure and functional correlates.
Proc Natl Acad Sci U S A, 120, 2023
3S37
DownloadVisualize
BU of 3s37 by Molmil
Structural basis for the function of two anti-VEGF receptor antibodies
分子名称: 1121B Fab heavy chain, 1121B Fab light chain, Vascular endothelial growth factor receptor 2
著者Franklin, M.C.
登録日2011-05-17
公開日2011-08-24
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Structural Basis for the Function of Two Anti-VEGF Receptor 2 Antibodies.
Structure, 19, 2011
5WPW
DownloadVisualize
BU of 5wpw by Molmil
Crystal structure of coconut allergen cocosin
分子名称: 11S globulin isoform 1
著者Jin, T, Zhang, Y.
登録日2016-11-21
公開日2017-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.847 Å)
主引用文献Crystal Structure of Cocosin, A Potential Food Allergen from Coconut (Cocos nucifera)
J. Agric. Food Chem., 65, 2017
8GI9
DownloadVisualize
BU of 8gi9 by Molmil
Cation channelrhodopsin from Hyphochytrium catenoides (HcCCR) embedded in peptidisc
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHOLESTEROL, Cation Channelrhodopsin, ...
著者Morizumi, T, Kim, K, Li, H, Spudich, J.L, Ernst, O.P.
登録日2023-03-13
公開日2023-07-26
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Structures of channelrhodopsin paralogs in peptidiscs explain their contrasting K + and Na + selectivities.
Nat Commun, 14, 2023
8GI8
DownloadVisualize
BU of 8gi8 by Molmil
Kalium channelrhodopsin 1 from Hyphochytrium catenoides (HcKCR1) embedded in peptidisc
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHOLESTEROL, Kalium Channelrhodopsin 1, ...
著者Morizumi, T, Kim, K, Li, H, Spudich, J.L, Ernst, O.P.
登録日2023-03-13
公開日2023-07-26
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Structures of channelrhodopsin paralogs in peptidiscs explain their contrasting K + and Na + selectivities.
Nat Commun, 14, 2023
8G93
DownloadVisualize
BU of 8g93 by Molmil
Crystal structures of 17-beta-hydroxysteroid dehydrogenase 13
分子名称: 3-fluoro-N-({(1r,4r)-4-[(2-fluorophenoxy)methyl]-1-hydroxycyclohexyl}methyl)-4-hydroxybenzamide, Hydroxysteroid 17-beta dehydrogenase 13, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Liu, S.
登録日2023-02-21
公開日2023-08-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13.
Nat Commun, 14, 2023
8G9V
DownloadVisualize
BU of 8g9v by Molmil
Crystal structures of 17-beta-hydroxysteroid dehydrogenase 13
分子名称: 17-beta-hydroxysteroid dehydrogenase 13, 4-{[2,5-dimethyl-3-(4-methylbenzene-1-sulfonyl)benzene-1-sulfonyl]amino}benzoic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Liu, S.
登録日2023-02-22
公開日2023-08-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.645 Å)
主引用文献Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13.
Nat Commun, 14, 2023
3S34
DownloadVisualize
BU of 3s34 by Molmil
Structure of the 1121B Fab fragment
分子名称: 1121B Fab heavy chain, 1121B Fab light chain, PHOSPHATE ION
著者Franklin, M.C.
登録日2011-05-17
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Structural Basis for the Function of Two Anti-VEGF Receptor 2 Antibodies.
Structure, 19, 2011
7XAF
DownloadVisualize
BU of 7xaf by Molmil
The crystal structure of TrkA kinase in complex with 4^6,14-dimethyl-N-(3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl)-10-oxo-5-oxa-11,14-diaza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclo- tetradecaphan-2-yne-45-carboxamide
分子名称: 4^6,14-dimethyl-N-(3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl)-10-oxo-5-oxa-11,14-diaza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclo-tetradecaphan-2-yne-45-carboxamide, High affinity nerve growth factor receptor
著者Zhang, Z.M, Wang, Y.J.
登録日2022-03-17
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.001182 Å)
主引用文献Discovery of the First Highly Selective and Broadly Effective Macrocycle-Based Type II TRK Inhibitors that Overcome Clinically Acquired Resistance.
J.Med.Chem., 65, 2022

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon