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1HE5
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BU of 1he5 by Molmil
Human biliverdin IX beta reductase: NADP/Lumichrome ternary complex
分子名称: BILIVERDIN IX BETA REDUCTASE, LUMICHROME, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Pereira, P.J.B, Macedo-Ribeiro, S, Parraga, A, Perez-Luque, R, Cunningham, O, Darcy, K, Mantle, T.J, Coll, M.
登録日2000-11-19
公開日2001-02-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of Human Biliverdin Ix Beta Reductase, an Early Fetal Bilirubin Ix Producing Enzyme
Nat.Struct.Biol., 8, 2001
8CZP
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2.25 angstrom resolution crystal structure of as-isolated KatG from Mycobacterium tuberculosis with an MYW cofactor
分子名称: ACETATE ION, Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Li, J, Liu, A.
登録日2022-05-25
公開日2023-12-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献2.25 angstrom resolution crystal structure of as-isolated KatG from Mycobacterium tuberculosis with an MYW cofactor
To Be Published
8D2P
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BU of 8d2p by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Target bound)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA target strand (5'-D(P*CP*CP*AP*GP*GP*AP*TP*CP*TP*TP*GP*CP*CP*AP*TP*CP*CP*TP*AP*CP*CP*TP*CP*T)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2N
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BU of 8d2n by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Pre-cleavage)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2K
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Structure of Acidothermus cellulolyticus Cas9 ternary complex (Cleavage Intermediate 2)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*GP*A)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2O
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BU of 8d2o by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Post-cleavage 2)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2L
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BU of 8d2l by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Cleavage Intermediate 1)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*GP*A)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
8D2Q
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BU of 8d2q by Molmil
Structure of Acidothermus cellulolyticus Cas9 ternary complex (Post-cleavage 1)
分子名称: CRISPR-associated endonuclease, Csn1 family, DNA non-target strand (5'-D(P*AP*TP*AP*CP*AP*CP*CP*AP*AP*GP*CP*T)-3'), ...
著者Rai, J, Das, A, Li, H.
登録日2022-05-30
公開日2023-12-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Coupled catalytic states and the role of metal coordination in Cas9.
Nat Catal, 6, 2023
1GNO
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BU of 1gno by Molmil
HIV-1 PROTEASE (WILD TYPE) COMPLEXED WITH U89360E (INHIBITOR)
分子名称: HIV-1 PROTEASE, N-[[1-[N-ACETAMIDYL]-[1-CYCLOHEXYLMETHYL-2-HYDROXY-4-ISOPROPYL]-BUT-4-YL]-CARBONYL]-GLUTAMINYL-ARGINYL-AMIDE
著者Hong, L, Treharne, A, Hartsuck, J.A, Foundling, S, Tang, J.
登録日1996-05-04
公開日1996-11-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of complexes of a peptidic inhibitor with wild-type and two mutant HIV-1 proteases.
Biochemistry, 35, 1996
1H6R
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BU of 1h6r by Molmil
The oxidized state of a redox sensitive variant of green fluorescent protein
分子名称: CHLORIDE ION, GREEN FLUORESCENT PROTEIN
著者Ostergaard, H, Henriksen, A, Hansen, F.G, Winther, J.R.
登録日2001-06-22
公開日2001-11-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Shedding Light on Disulfide Bond Formation: Engineering a Redox Switch in Green Fluorescent Protein
Embo J., 20, 2001
1H3E
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BU of 1h3e by Molmil
Tyrosyl-tRNA synthetase from Thermus thermophilus complexed with wild-type tRNAtyr(GUA) and with ATP and tyrosinol
分子名称: 4-[(2S)-2-amino-3-hydroxypropyl]phenol, ADENOSINE-5'-TRIPHOSPHATE, TYROSYL-TRNA SYNTHETASE, ...
著者Cusack, S, Yaremchuk, A, Kriklivyi, I, Tukalo, M.
登録日2002-08-28
公開日2002-10-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Class I Tyrosyl-tRNA Synthetase Has a Class II Mode or tRNA Recognition
Embo J., 21, 2002
8D1E
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BU of 8d1e by Molmil
hBest2 1uM Ca2+ (Ca2+-bound) closed state
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, 2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diol, Bestrophin-2, ...
著者Owji, A.P, Kittredge, A, Hendrickson, W.A, Tingting, Y.
登録日2022-05-27
公開日2022-07-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (1.78 Å)
主引用文献Structures and gating mechanisms of human bestrophin anion channels.
Nat Commun, 13, 2022
8DK2
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CryoEM structure of Pseudomonas aeruginosa PA14 JetABC in an unclamped state trapped in ATP dependent dimeric form
分子名称: DNA (26-MER), JetA, JetB, ...
著者Deep, A, Gu, Y, Gao, Y, Ego, K, Herzik, M, Zhou, H, Corbett, K.
登録日2022-07-01
公開日2022-10-05
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献The SMC-family Wadjet complex protects bacteria from plasmid transformation by recognition and cleavage of closed-circular DNA.
Mol.Cell, 82, 2022
8D1J
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BU of 8d1j by Molmil
hBest1 5mM Ca2+ (Ca2+-bound) closed state
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Bestrophin-1, CALCIUM ION
著者Owji, A.P, Kittredge, A, Hendrickson, W.A, Tingting, Y.
登録日2022-05-27
公開日2022-07-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.05 Å)
主引用文献Structures and gating mechanisms of human bestrophin anion channels.
Nat Commun, 13, 2022
8D1L
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hBest1 Ca2+-bound partially open aperture state
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Bestrophin-1, CALCIUM ION, ...
著者Owji, A.P, Kittredge, A, Hendrickson, W.A, Tingting, Y.
登録日2022-05-27
公開日2022-07-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.12 Å)
主引用文献Structures and gating mechanisms of human bestrophin anion channels.
Nat Commun, 13, 2022
1HDH
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BU of 1hdh by Molmil
Arylsulfatase from Pseudomonas aeruginosa
分子名称: Arylsulfatase, CALCIUM ION, SULFATE ION
著者Boltes, I, Czapinska, H, Kahnert, A, von Buelow, R, Dirks, T, Schmidt, B, von Figura, K, Kertesz, M.A, Uson, I.
登録日2000-11-16
公開日2001-11-15
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献1.3 A Structure of Arylsulfatase from Pseudomonas Aeruginosa Establishes the Catalytic Mechanism of Sulfate Ester Cleavage in the Sulfatase Family.
Structure, 9, 2001
8D1M
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hBest1 Ca2+-unbound closed state
分子名称: Bestrophin-1
著者Owji, A.P, Kittredge, A, Hendrickson, W.A, Tingting, Y.
登録日2022-05-27
公開日2022-07-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Structures and gating mechanisms of human bestrophin anion channels.
Nat Commun, 13, 2022
1HE4
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Human biliverdin IX beta reductase: NADP/FMN ternary complex
分子名称: BILIVERDIN IX BETA REDUCTASE, FLAVIN MONONUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Pereira, P.J.B, Macedo-Ribeiro, S, Parraga, A, Perez-Luque, R, Cunningham, O, Darcy, K, Mantle, T.J, Coll, M.
登録日2000-11-19
公開日2001-02-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of Human Biliverdin Ix Beta Reductase, an Early Fetal Bilirubin Ix Producing Enzyme
Nat.Struct.Biol., 8, 2001
1H5V
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Thiopentasaccharide complex of the endoglucanase Cel5A from Bacillus agaradharens at 1.1 A resolution in the tetragonal crystal form
分子名称: CALCIUM ION, ENDOGLUCANASE 5A, SODIUM ION, ...
著者Varrot, A, Sulzenbacher, G, Schulein, M, Driguez, H, Davies, G.J.
登録日2001-05-28
公開日2002-05-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic Resolution Structure of Endoglucanase Cel5A in Complex with Methyl 4,4II,4III,4Iv-Tetrathio-Alpha-Cellopentoside Highlights the Alternative Binding Modes Targeted by Substrate Mimics
Acta Crystallogr.,Sect.D, 57, 2001
8DH6
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Cryo-EM structure of Saccharomyces cerevisiae cytochrome c oxidase (Complex IV) extracted in lipid nanodiscs
分子名称: CALCIUM ION, COPPER (II) ION, Cytochrome c oxidase subunit 1, ...
著者Godoy, A.S, Song, Y, Cheruvara, H, Quigley, A, Oliva, G.
登録日2022-06-25
公開日2022-07-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Cryo-EM structure of Saccharomyces cerevisiae cytochrome c oxidase (Complex IV) extracted in lipid nanodiscs
To Be Published
1HDG
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BU of 1hdg by Molmil
THE CRYSTAL STRUCTURE OF HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA AT 2.5 ANGSTROMS RESOLUTION
分子名称: HOLO-D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
著者Korndoerfer, I, Steipe, B, Huber, R, Tomschy, A, Jaenicke, R.
登録日1995-01-17
公開日1995-03-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima at 2.5 A resolution.
J.Mol.Biol., 246, 1995
8D1H
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hBest2 Ca2+-unbound closed state
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, 2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diol, Bestrophin-2, ...
著者Owji, A.P, Kittredge, A, Hendrickson, W.A, Tingting, Y.
登録日2022-05-27
公開日2022-07-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (1.94 Å)
主引用文献Structures and gating mechanisms of human bestrophin anion channels.
Nat Commun, 13, 2022
8DDG
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FYF peptide forms a standard beta-sheet
分子名称: PHE-TYR-PHE
著者Sawaya, M.R, Hazari, A, Eisenberg, D.E, Vlahakis, N.W.
登録日2022-06-18
公開日2022-09-28
最終更新日2024-05-22
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
1GNZ
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LECTIN I-B4 FROM GRIFFONIA SIMPLICIFOLIA (GS I-B4)METAL FREE FORM
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GSI-B4 ISOLECTIN, PHOSPHATE ION
著者Lescar, J, Loris, R, Mitchell, E, Gautier, C, Imberty, A.
登録日2001-10-11
公開日2001-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Isolectins I-A and I-B of Griffonia (Bandeiraea) Simplicifolia. Crystal Structure of Metal-Free Gs I-B(4) and Molecular Basis for Metal Binding and Monosaccharide Specificity.
J.Biol.Chem., 277, 2002
8DIL
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Crystal structure of putative nitroreductase from Salmonella enterica
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Chang, C, Skarina, T, Mesa, N, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-06-29
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of putative nitroreductase from Salmonella enterica
to be published

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