Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7DJR
DownloadVisualize
BU of 7djr by Molmil
Crystal structure of SARS-CoV-2 main protease (no ligand)
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE
著者Deetanya, P, Wangkanont, K.
登録日2020-11-21
公開日2021-06-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Interaction of 8-anilinonaphthalene-1-sulfonate with SARS-CoV-2 main protease and its application as a fluorescent probe for inhibitor identification.
Comput Struct Biotechnol J, 19, 2021
2EQH
DownloadVisualize
BU of 2eqh by Molmil
Solution structure of growth-blocking peptide of the armyworm, Pseudaletia separata
分子名称: Growth-blocking peptide, short form
著者Umetsu, Y, Aizawa, T, Kamiya, M, Kumaki, Y, Demura, M, Kawano, K.
登録日2007-03-30
公開日2008-04-01
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献C-terminal elongation of growth-blocking peptide enhances its biological activity and micelle binding affinity
J.Biol.Chem., 284, 2009
2EQT
DownloadVisualize
BU of 2eqt by Molmil
Micelle-bound structure of growth-blocking peptide of the armyworm, Pseudaletia separata
分子名称: Growth-blocking peptide, long form
著者Umetsu, Y, Aizawa, T, Kamiya, M, Kumaki, Y, Demura, M, Kawano, K.
登録日2007-03-30
公開日2008-04-01
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献C-terminal elongation of growth-blocking peptide enhances its biological activity and micelle binding affinity
J.Biol.Chem., 284, 2009
2RTV
DownloadVisualize
BU of 2rtv by Molmil
Tachyplesin I in water
分子名称: Tachyplesin-1
著者Kushibiki, T, Kamiya, M, Aizawa, T, Kumaki, Y, Kikukawa, T, Mizuguchi, M, Demura, M, Kawabata, S.I, Kawano, K.
登録日2013-09-19
公開日2014-02-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Interaction between tachyplesin I, an antimicrobial peptide derived from horseshoe crab, and lipopolysaccharide.
Biochim.Biophys.Acta, 1844, 2014
2RPS
DownloadVisualize
BU of 2rps by Molmil
Solution structure of a novel insect chemokine isolated from integument
分子名称: Chemokine
著者Kamiya, M, Nakatogawa, S, Oda, Y, Kamijima, T, Aizawa, T, Demura, M, Hayakawa, Y, Kawano, K.
登録日2008-07-28
公開日2009-06-16
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献A novel peptide mediates aggregation and migration of hemocytes from an insect
Curr.Biol., 19, 2009
1HQW
DownloadVisualize
BU of 1hqw by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF CONCANAVALIN A WITH A TRIPEPTIDE YPY
分子名称: CALCIUM ION, CONCANAVALIN A, MANGANESE (II) ION, ...
著者Zhang, Z, Qian, M, Huang, Q, Jia, Y, Tang, Y, Wang, K, Cui, D, Li, M.
登録日2000-12-20
公開日2003-10-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the complex of concanavalin A and tripeptide
J.PROTEIN CHEM., 20, 2001
2RQ2
DownloadVisualize
BU of 2rq2 by Molmil
The solution structure of the N-terminal fragment of big defensin
分子名称: Big defensin
著者Kouno, T, Mizuguchi, M, Aizawa, T, Shinoda, H, Demura, M, Kawabata, S, Kawano, K.
登録日2009-01-07
公開日2009-08-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A novel beta-defensin structure: big defensin changes its N-terminal structure to associate with the target membrane
Biochemistry, 48, 2009
6JFU
DownloadVisualize
BU of 6jfu by Molmil
Crystal structure of Nme2Cas9 in complex with sgRNA and target DNA (AGGCCC PAM)
分子名称: 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cas9, non-target strand, ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-02-12
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6KC7
DownloadVisualize
BU of 6kc7 by Molmil
Crystal structure of Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in seed-base paring state
分子名称: CRISPR-associated endonuclease Cas9, DNA (5'-D(*AP*TP*AP*TP*GP*AP*TP*TP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*TP*CP*AP*TP*AP*TP*GP*TP*AP*AP*AP*GP*TP*T)-3'), ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-06-27
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6KC8
DownloadVisualize
BU of 6kc8 by Molmil
Crystal structure of WT Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in post-cleavage state
分子名称: CRISPR-associated endonuclease Cas9, DNA (5'-D(*AP*TP*AP*TP*GP*AP*TP*TP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*TP*CP*AP*TP*AP*TP*GP*TP*A)-3'), ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-06-27
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
2Z2E
DownloadVisualize
BU of 2z2e by Molmil
Crystal Structure of Canine Milk Lysozyme Stabilized against Non-enzymatic Deamidation
分子名称: Lysozyme C, milk isozyme, SULFATE ION
著者Nonaka, Y, Akieda, D, Watanabe, N, Tanaka, I, Kamiya, M, Aizawa, T, Nitta, K, Demura, M, Kawano, K.
登録日2007-05-21
公開日2007-11-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Spontaneous asparaginyl deamidation of canine milk lysozyme under mild conditions
Proteins, 72, 2008
6JDV
DownloadVisualize
BU of 6jdv by Molmil
Crystal structure of Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in catalytic state
分子名称: 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cas9, MAGNESIUM ION, ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-02-02
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6JE3
DownloadVisualize
BU of 6je3 by Molmil
Crystal structure of Nme2Cas9 in complex with sgRNA and target DNA (AGGCCC PAM) with 5 nt overhang
分子名称: 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cas9, non-target DNA strand, ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-02-03
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.931 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
4MV5
DownloadVisualize
BU of 4mv5 by Molmil
IspH in complex with 6-chloropyridin-3-ylmethyl diphosphate
分子名称: (6-chloropyridin-3-yl)methyl trihydrogen diphosphate, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER
著者Span, I, Wang, K, Song, Y, Eisenreich, W, Bacher, A, Oldfield, E, Groll, M.
登録日2013-09-23
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insights into the Binding of Pyridines to the Iron-Sulfur Enzyme IspH.
J.Am.Chem.Soc., 136, 2014
1R78
DownloadVisualize
BU of 1r78 by Molmil
CDK2 complex with a 4-alkynyl oxindole inhibitor
分子名称: 4-((3R,4S,5R)-4-AMINO-3,5-DIHYDROXY-HEX-1-YNYL)-5-FLUORO-3-[1-(3-METHOXY-1H-PYRROL-2-YL)-METH-(Z)-YLIDENE]-1,3-DIHYDRO-INDOL-2-ONE, Cell division protein kinase 2
著者Luk, K.-C, Simcox, M.E, Schutt, A, Rowan, K, Thompson, T, Chen, Y, Kammlott, U, DePinto, W, Dunten, P, Dermatakis, A.
登録日2003-10-20
公開日2004-01-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A new series of potent oxindole inhibitors of CDK2
Bioorg.Med.Chem.Lett., 14, 2004
1C32
DownloadVisualize
BU of 1c32 by Molmil
SOLUTION STRUCTURE OF A QUADRUPLEX FORMING DNA AND ITS INTERMIDIATE
分子名称: DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3')
著者Bolton, P.H, Marathias, V.M, Wang, K.
登録日1999-07-24
公開日1999-08-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the potassium-saturated, 2:1, and intermediate, 1:1, forms of a quadruplex DNA.
Nucleic Acids Res., 28, 2000
1C34
DownloadVisualize
BU of 1c34 by Molmil
SOLUTION STRUCTURE OF A QUADRUPLEX FORMING DNA AND ITS INTERMIDIATE
分子名称: DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3')
著者Bolton, P.H, Marathias, V.M, Wang, K.
登録日1999-07-24
公開日1999-08-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the potassium-saturated, 2:1, and intermediate, 1:1, forms of a quadruplex DNA.
Nucleic Acids Res., 28, 2000
1V49
DownloadVisualize
BU of 1v49 by Molmil
Solution structure of microtubule-associated protein light chain-3
分子名称: Microtubule-associated proteins 1A/1B light chain 3B
著者Kouno, T, Mizuguchi, M, Tanida, I, Ueno, T, Kominami, E, Kawano, K.
登録日2003-11-11
公開日2004-12-28
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of microtubule-associated protein light chain 3 and identification of its functional subdomains.
J.Biol.Chem., 280, 2005
1WO1
DownloadVisualize
BU of 1wo1 by Molmil
Tachyplesin I in dodecylphosphocholine micelles
分子名称: Tachyplesin I
著者Mizuguchi, M, Kamata, S, Kawabata, S, Fujitani, N, Kawano, K.
登録日2004-08-11
公開日2005-08-09
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of tachyplesin I in dodecylphosphocholine
to be published
1WRU
DownloadVisualize
BU of 1wru by Molmil
Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu
分子名称: 43 kDa tail protein
著者Kondou, Y, Kitazawa, D, Takeda, S, Yamashita, E, Mizuguchi, M, Kawano, K, Tsukihara, T.
登録日2004-10-27
公開日2005-09-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu
To be Published
1WO0
DownloadVisualize
BU of 1wo0 by Molmil
Solution structure of tachyplesin I in H2O
分子名称: Tachyplesin I
著者Mizuguchi, M, Kamata, S, Kawabata, S, Fujitani, N, Kawano, K.
登録日2004-08-11
公開日2005-08-09
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of tachyplesin I in H2O
to be published
1C35
DownloadVisualize
BU of 1c35 by Molmil
SOLUTION STRUCTURE OF A QUADRUPLEX FORMING DNA AND ITS INTERMIDIATE
分子名称: DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3'), POTASSIUM ION
著者Bolton, P.H, Marathias, V.M, Wang, K.
登録日1999-07-25
公開日1999-08-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the potassium-saturated, 2:1, and intermediate, 1:1, forms of a quadruplex DNA.
Nucleic Acids Res., 28, 2000
1C38
DownloadVisualize
BU of 1c38 by Molmil
SOLUTION STRUCTURE OF A QUADRUPLEX FORMING DNA AND ITS INTERMEDIATE
分子名称: DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3'), POTASSIUM ION
著者Bolton, P.H, Marathias, V.M, Wang, K.
登録日1999-07-25
公開日1999-08-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the potassium-saturated, 2:1, and intermediate, 1:1, forms of a quadruplex DNA.
Nucleic Acids Res., 28, 2000
2MDB
DownloadVisualize
BU of 2mdb by Molmil
Tachyplesin I in the presence of lipopolysaccharide
分子名称: Tachyplesin-1
著者Kushibiki, T, Kamiya, M, Aizawa, T, Kumaki, Y, Kikukawa, T, Mizuguchi, M, Demura, M, Kawabata, S.I, Kawano, K.
登録日2013-09-09
公開日2014-02-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Interaction between tachyplesin I, an antimicrobial peptide derived from horseshoe crab, and lipopolysaccharide.
Biochim.Biophys.Acta, 1844, 2014
2JX8
DownloadVisualize
BU of 2jx8 by Molmil
Solution structure of hPCIF1 WW domain
分子名称: Phosphorylated CTD-interacting factor 1
著者Kouno, T, Iwamoto, Y, Hirose, Y, Aizawa, T, Demura, M, Kawano, K, Ohkuma, Y, Mizuguchi, M.
登録日2007-11-09
公開日2008-11-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1H, 13C, and 15N resonance assignments of hPCIF1 WW domain
To be Published

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon