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2MDK
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BU of 2mdk by Molmil
NMR Solution Structure of MSP-P56S Domain/VAPB in DPC
分子名称: Vesicle-associated membrane protein-associated protein B/C
著者Qin, H, Lim, L, Song, J.
登録日2013-09-11
公開日2013-10-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献MSP-P56S Domain, VAPB in DPC
To be Published
2N2C
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BU of 2n2c by Molmil
NMR Structure of TDP-43 prion-like hydrophobic helix in DPC
分子名称: TAR DNA-binding protein 43
著者Lim, L, Song, J.
登録日2015-05-06
公開日2015-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献ALS-causing mutations significantly perturb the self-assembly and interaction with nucleic acid of the intrinsically-disordered prion-like domain of TDP-43
To be Published
2MP3
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BU of 2mp3 by Molmil
Truncated L126Z-sod1 in DPC micelle
分子名称: Superoxide dismutase [Cu-Zn]
著者Lim, L, Song, J.
登録日2014-05-10
公開日2015-05-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Mechanism for transforming cytosolic SOD1 into integral membrane proteins of organelles by ALS-causing mutations
Biochim.Biophys.Acta, 1848, 2015
6KNR
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BU of 6knr by Molmil
Crystal structure of Estrogen-related receptor gamma ligand-binding domain with DN200699
分子名称: (E)-4-(1-(4-(1-cyclopropylpiperidin-4-yl)phenyl)-5-hydroxy-2-phenylpent-1-en-1-yl)phenol, Estrogen-related receptor gamma
著者Yoon, H, Kim, J, Chin, J, Song, J, Cho, S.J.
登録日2019-08-07
公開日2020-08-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献An orally available inverse agonist of estrogen-related receptor gamma showed expanded efficacy for the radioiodine therapy of poorly differentiated thyroid cancer.
Eur.J.Med.Chem., 205, 2020
2NAM
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BU of 2nam by Molmil
Full-length WT SOD1 in DPC MICELLE
分子名称: Superoxide dismutase [Cu-Zn]
著者Lim, L, Song, J.
登録日2016-01-06
公開日2016-12-14
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献SALS-linked WT-SOD1 adopts a highly similar helical conformation as FALS-causing L126Z-SOD1 in a membrane environment
Biochim.Biophys.Acta, 1858, 2016
5C6D
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BU of 5c6d by Molmil
Crystal structure of USP7 in complex with UHRF1
分子名称: E3 ubiquitin-protein ligase UHRF1, Ubiquitin carboxyl-terminal hydrolase 7
著者Zhang, Z.-M, Song, J.
登録日2015-06-22
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.292 Å)
主引用文献An Allosteric Interaction Links USP7 to Deubiquitination and Chromatin Targeting of UHRF1.
Cell Rep, 12, 2015
5EJX
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BU of 5ejx by Molmil
X-ray Free Electron Laser Structure of Cytochrome C Peroxidase
分子名称: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ...
著者Doukov, T, Soltis, S.M, Baxter, E.L, Cohen, A, Song, J, McPhillips, S, Poulos, T.L, Meharenna, Y.T, Chreifi, G.
登録日2015-11-02
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the pristine peroxidase ferryl center and its relevance to proton-coupled electron transfer.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EJT
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BU of 5ejt by Molmil
Thermally annealed ferryl Cytochrome C Peroxidase crystal structure
分子名称: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ...
著者Doukov, T, Soltis, S.M, Baxter, E.L, Cohen, A, Song, J, McPhillips, S, Poulos, T.L, Meharenna, Y.T, Chreifi, G.
登録日2015-11-02
公開日2016-01-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the pristine peroxidase ferryl center and its relevance to proton-coupled electron transfer.
Proc.Natl.Acad.Sci.USA, 113, 2016
7DEA
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BU of 7dea by Molmil
Structure of an avian influenza H5 hemagglutinin from the influenza virus A/duck Northern China/22/2017 (H5N6)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Sun, H, Sun, H, Song, J, Zhang, W, Wei, X, Qi, J, Gao, G.F, Liu, J.
登録日2020-11-03
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Haemagglutinin and neuraminidase acid stability in H5N6 avian influenza virus confers infection adaptation in mammals
To Be Published
7DEB
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BU of 7deb by Molmil
Structure of an avian influenza H5 hemagglutinin from the influenza virus A/duck/Eastern China/L0230/2010 (H5N2)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Sun, H, Sun, H, Song, J, Zhang, W, Qi, J, Gao, G.F, Liu, J.
登録日2020-11-03
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Haemagglutinin and neuraminidase acid stability in H5N6 avian influenza virus confers infection adaptation in mammals
To Be Published
6A6K
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BU of 6a6k by Molmil
Crystal structure of Estrogen-related Receptor-3 (ERR-gamma) ligand binding domain with DN201000
分子名称: 3-[(~{E})-5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol, Estrogen-related receptor gamma
著者Yoon, H, Kim, J, Chin, J, Cho, S.J, Song, J.
登録日2018-06-28
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery of Potent, Selective, and Orally Bioavailable Estrogen-Related Receptor-gamma Inverse Agonists To Restore the Sodium Iodide Symporter Function in Anaplastic Thyroid Cancer.
J. Med. Chem., 62, 2019
5Y70
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BU of 5y70 by Molmil
NMR structure of KMP11 in DPC micelle
分子名称: Kinetoplastid membrane protein 11
著者Lu, Y, Lim, L.Z, Song, J.
登録日2017-08-16
公開日2018-02-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Kinetoplastid membrane protein-11 adopts a four-helix bundle fold in DPC micelle.
FEBS Lett., 591, 2017
5XQ5
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BU of 5xq5 by Molmil
NMR structure of the domain 5 of the E. coli ribosomal protein S1
分子名称: 30S ribosomal protein S1
著者Lu, Y, Lim, L.Z, Song, J.
登録日2017-06-06
公開日2018-06-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure of the domain 5 of the E. coli ribosomal protein S1
To Be Published
5YX2
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BU of 5yx2 by Molmil
Crystal structure of DNMT3A-DNMT3L in complex with DNA containing two CpG sites
分子名称: DNA (25-MER), DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3A, ...
著者Zhang, Z.M, Song, J.
登録日2017-12-01
公開日2018-01-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.653 Å)
主引用文献Structural basis for DNMT3A-mediated de novo DNA methylation.
Nature, 554, 2018
1VJH
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BU of 1vjh by Molmil
Crystal structure of gene product of At1g24000 from Arabidopsis thaliana
分子名称: Bet v I allergen family
著者Wesenberg, G.E, Smith, D.W, Phillips Jr, G.N, Johnson, K.A, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
登録日2004-02-20
公開日2004-03-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献1H, 15N and 13C resonance assignments of the putative Bet v 1 family protein At1g24000.1 from Arabidopsis thaliana.
J.Biomol.Nmr, 32, 2005
7LO8
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BU of 7lo8 by Molmil
NorA in complex with Fab36
分子名称: Fab36 Heavy Chain, Fab36 Light Chain, Quinolone resistance protein NorA
著者Brawley, D.N, Sauer, D.B, Song, J.M, Koide, A, Koide, S, Traaseth, N.J, Wang, D.N.
登録日2021-02-09
公開日2022-04-20
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural basis for inhibition of the drug efflux pump NorA from Staphylococcus aureus.
Nat.Chem.Biol., 18, 2022
7LO7
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BU of 7lo7 by Molmil
NorA in complex with Fab25
分子名称: Fab25 Heavy Chain, Fab25 Light Chain, Quinolone resistance protein NorA
著者Brawley, D.N, Sauer, D.B, Song, J.M, Koide, A, Koide, S, Traaseth, N.J, Wang, D.N.
登録日2021-02-09
公開日2022-04-20
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structural basis for inhibition of the drug efflux pump NorA from Staphylococcus aureus.
Nat.Chem.Biol., 18, 2022
2QCY
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BU of 2qcy by Molmil
Crystal Structure of a monomeric form of Severe Acute Respiratory Syndrome (SARS) 3C-like protease mutant
分子名称: 3C-like proteinase
著者Shi, J.H, Sivaraman, J, Song, J.X.
登録日2007-06-20
公開日2008-03-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mechanism for controlling the dimer-monomer switch and coupling dimerization to catalysis of the severe acute respiratory syndrome coronavirus 3C-like protease.
J.Virol., 82, 2008
8ZVI
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BU of 8zvi by Molmil
Structure of the bacteriophage T5 capsid
分子名称: Decoration protein, Major capsid protein
著者Peng, Y, Liu, H.R.
登録日2024-06-11
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of Mature and Urea-Treated Empty Bacteriophage T5: Insights into Siphophage Infection and DNA Ejection.
Int J Mol Sci, 25, 2024
8EIH
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BU of 8eih by Molmil
Cryo-EM structure of human DNMT3B homo-tetramer (form I)
分子名称: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Lu, J.W, Song, J.K.
登録日2022-09-15
公開日2023-09-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structural basis for the allosteric regulation and dynamic assembly of DNMT3B.
Nucleic Acids Res., 51, 2023
8EIK
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BU of 8eik by Molmil
Cryo-EM structure of human DNMT3B homo-hexamer
分子名称: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Lu, J.W, Song, J.K.
登録日2022-09-15
公開日2023-09-20
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Structural basis for the allosteric regulation and dynamic assembly of DNMT3B.
Nucleic Acids Res., 51, 2023
8EIJ
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BU of 8eij by Molmil
Cryo-EM structure of human DNMT3B homo-trimer
分子名称: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Lu, J.W, Song, J.K.
登録日2022-09-15
公開日2023-09-20
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Structural basis for the allosteric regulation and dynamic assembly of DNMT3B.
Nucleic Acids Res., 51, 2023
8EII
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BU of 8eii by Molmil
Cryo-EM structure of human DNMT3B homo-tetramer (form II)
分子名称: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Lu, J.W, Song, J.K.
登録日2022-09-15
公開日2023-09-20
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structural basis for the allosteric regulation and dynamic assembly of DNMT3B.
Nucleic Acids Res., 51, 2023
3GXU
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BU of 3gxu by Molmil
Crystal structure of Eph receptor and ephrin complex
分子名称: Ephrin type-A receptor 4, Ephrin-B2
著者Qin, H.N, Song, J.X.
登録日2009-04-03
公開日2009-10-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural characterization of the EphA4-ephrin-B2 complex reveals new features enabling Eph-ephrin binding promiscuity
J.Biol.Chem., 2009
6YEJ
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BU of 6yej by Molmil
Cryo-EM structure of the Full-length disease type human Huntingtin
分子名称: Huntingtin
著者Tame, G, Jung, T, Dal Perraro, M, Hebert, H, Song, J.
登録日2020-03-24
公開日2020-12-16
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (18.200001 Å)
主引用文献The Polyglutamine Expansion at the N-Terminal of Huntingtin Protein Modulates the Dynamic Configuration and Phosphorylation of the C-Terminal HEAT Domain.
Structure, 28, 2020

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