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7XLJ
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BU of 7xlj by Molmil
The crystal structure of ORE1(ANAC092) NAC domain
分子名称: NAC domain-containing protein 92
著者Chun, I.S, Kim, M.S.
登録日2022-04-21
公開日2023-03-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis of DNA binding by the NAC transcription factor ORE1, a master regulator of plant senescence.
Plant Commun., 4, 2023
7XP3
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BU of 7xp3 by Molmil
DNA complex form of ORESARA1(ANAC092) NAC Domain
分子名称: DNA (5'-D(*AP*GP*TP*TP*AP*CP*GP*TP*AP*CP*GP*GP*CP*AP*CP*AP*CP*GP*TP*AP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*TP*AP*CP*GP*TP*GP*TP*GP*CP*CP*GP*TP*AP*CP*GP*TP*AP*AP*C)-3'), DNA (5'-D(P*CP*AP*CP*AP*CP*GP*TP*AP*AP*C)-3'), ...
著者Chun, I.S, Kim, M.S.
登録日2022-05-03
公開日2023-03-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural basis of DNA binding by the NAC transcription factor ORE1, a master regulator of plant senescence.
Plant Commun., 4, 2023
2NYI
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BU of 2nyi by Molmil
Crystal Structure of an Unknown Protein from Galdieria sulphuraria
分子名称: unknown protein
著者Bitto, E, Wesenberg, G.E, Phillips Jr, G.N, McCoy, J.G, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
登録日2006-11-20
公開日2006-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of tandem ACT domain-containing protein ACTP from Galdieria sulphuraria.
Proteins, 80, 2012
1DU3
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BU of 1du3 by Molmil
Crystal structure of TRAIL-SDR5
分子名称: DEATH RECEPTOR 5, TNF-RELATED APOPTOSIS INDUCING LIGAND, ZINC ION
著者Cha, S.-S, Sung, B.-J, Oh, B.-H.
登録日2000-01-14
公開日2000-09-27
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of TRAIL-DR5 complex identifies a critical role of the unique frame insertion in conferring recognition specificity
J.Biol.Chem., 275, 2000
2A5E
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BU of 2a5e by Molmil
SOLUTION NMR STRUCTURE OF TUMOR SUPPRESSOR P16INK4A, RESTRAINED MINIMIZED MEAN STRUCTURE
分子名称: TUMOR SUPPRESSOR P16INK4A
著者Byeon, I.-J.L, Li, J, Ericson, K, Selby, T.L, Tevelev, A, Kim, H.-J, O'Maille, P, Tsai, M.-D.
登録日1998-02-13
公開日1999-08-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Tumor suppressor p16INK4A: determination of solution structure and analyses of its interaction with cyclin-dependent kinase 4.
Mol.Cell, 1, 1998
2GM3
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BU of 2gm3 by Molmil
Crystal Structure of an Universal Stress Protein Family Protein from Arabidopsis Thaliana At3g01520 with AMP Bound
分子名称: ADENOSINE MONOPHOSPHATE, unknown protein
著者Bitto, E, Wesenberg, G.E, Phillips Jr, G.N, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
登録日2006-04-05
公開日2006-04-18
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.461 Å)
主引用文献Crystal structure of the protein At3g01520, a eukaryotic universal stress protein-like protein from arabidopsis thaliana in complex with AMP.
Proteins, 83, 2015
5U9M
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BU of 5u9m by Molmil
Copper-Zinc Superoxide Dismutase is Activated through a Sulfenic Acid Intermediate at a Copper-ion Entry Site
分子名称: Superoxide dismutase 1 copper chaperone, Superoxide dismutase [Cu-Zn], ZINC ION
著者Taylor, A.B, Hart, P.J, Winkler, D.D.
登録日2016-12-16
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Copper-zinc superoxide dismutase is activated through a sulfenic acid intermediate at a copper ion entry site.
J. Biol. Chem., 292, 2017
5YCN
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Human PPARgamma ligand binding domain complexed with Lobeglitazone
分子名称: (5S)-5-[[4-[2-[[6-(4-methoxyphenoxy)pyrimidin-4-yl]-methyl-amino]ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
著者Jang, J.Y, Han, B.W.
登録日2017-09-07
公開日2018-09-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for the Enhanced Anti-Diabetic Efficacy of Lobeglitazone on PPAR gamma.
Sci Rep, 8, 2018
5YCP
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Human PPARgamma ligand binding domain complexed with Rosiglitazone
分子名称: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), Nuclear receptor coactivator 1, ...
著者Jang, J.Y, Han, B.W.
登録日2017-09-07
公開日2018-09-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Enhanced Anti-Diabetic Efficacy of Lobeglitazone on PPAR gamma.
Sci Rep, 8, 2018
6A0H
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BU of 6a0h by Molmil
Crystal structure of human protein N-terminal asparagine amidohydrolase (NTAN1) C75S mutant with Asn-Leu-Ala-Ala-Arg peptide
分子名称: 5-mer peptide ASN-LEU-ALA-ALA-ARG, GLYCEROL, PHOSPHATE ION, ...
著者Park, J.S, Han, B.W.
登録日2018-06-05
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.185 Å)
主引用文献Structural Analyses on the Deamidation of N-Terminal Asn in the Human N-Degron Pathway.
Biomolecules, 10, 2020
6A0F
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BU of 6a0f by Molmil
Crystal structure of human protein N-terminal asparagine amidohydrolase (NTAN1) C75S mutant with Asn-Phe-Ala-Ala-Arg peptide
分子名称: 5-mer peptide Asn-Phe-Ala-Ala-Arg, GLYCEROL, PHOSPHATE ION, ...
著者Park, J.S, Han, B.W.
登録日2018-06-05
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.384 Å)
主引用文献Structural Analyses on the Deamidation of N-Terminal Asn in the Human N-Degron Pathway.
Biomolecules, 10, 2020
6A0I
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BU of 6a0i by Molmil
Crystal structure of human protein N-terminal asparagine amidohydrolase (NTAN1) C75S mutant
分子名称: GLYCEROL, PHOSPHATE ION, Protein N-terminal asparagine amidohydrolase
著者Park, J.S, Han, B.W.
登録日2018-06-05
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Structural Analyses on the Deamidation of N-Terminal Asn in the Human N-Degron Pathway.
Biomolecules, 10, 2020
6A0E
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BU of 6a0e by Molmil
Crystal structure of human protein N-terminal asparagine amidohydrolase (NTAN1)
分子名称: GLYCEROL, PHOSPHATE ION, Protein N-terminal asparagine amidohydrolase
著者Park, J.S, Han, B.W.
登録日2018-06-05
公開日2019-12-11
最終更新日2020-06-24
実験手法X-RAY DIFFRACTION (1.947 Å)
主引用文献Structural Analyses on the Deamidation of N-Terminal Asn in the Human N-Degron Pathway.
Biomolecules, 10, 2020
6IJR
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BU of 6ijr by Molmil
Human PPARgamma ligand binding domain complexed with SB1495
分子名称: 16 mer peptide from Nuclear receptor coactivator 1, N-{[3-({[(1S,2R)-2-{[(2E)-2-cyano-4,4-dimethylpent-2-enoyl]amino}cyclopentyl]oxy}methyl)phenyl]methyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide, Peroxisome proliferator-activated receptor gamma
著者Jang, J.Y, Han, B.W.
登録日2018-10-11
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Sci Rep, 9, 2019
5CEH
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BU of 5ceh by Molmil
Structure of histone lysine demethylase KDM5A in complex with selective inhibitor
分子名称: 7-oxo-5-phenyl-6-(propan-2-yl)-4,7-dihydropyrazolo[1,5-a]pyrimidine-3-carbonitrile, Lysine-specific demethylase 5A, NICKEL (II) ION, ...
著者Kiefer, J.R, Vinogradova, M.
登録日2015-07-06
公開日2016-05-18
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献An inhibitor of KDM5 demethylases reduces survival of drug-tolerant cancer cells.
Nat.Chem.Biol., 12, 2016
6IY6
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BU of 6iy6 by Molmil
Crystal structure of human cytosolic aspartyl-tRNA synthetase (DRS) in complex with glutathion-S transferase (GST) domains from Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (AIMP2) and glutamyl-prolyl-tRNA synthetase (EPRS)
分子名称: Aminoacyl tRNA synthase complex-interacting multifunctional protein 2, Aspartate--tRNA ligase, cytoplasmic, ...
著者Park, S.H, Hahn, H, Han, B.W.
登録日2018-12-13
公開日2019-09-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The DRS-AIMP2-EPRS subcomplex acts as a pivot in the multi-tRNA synthetase complex.
Iucrj, 6, 2019
7M2U
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BU of 7m2u by Molmil
Nucleotide Excision Repair complex TFIIH Rad4-33
分子名称: CALCIUM ION, DNA repair helicase RAD25, DNA repair helicase RAD3, ...
著者van Eeuwen, T, Murakami, K.
登録日2021-03-17
公開日2021-07-28
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献Cryo-EM structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in nucleotide excision repair.
Nat Commun, 12, 2021
7MKA
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Structure of EC+EC (leading EC-focused)
分子名称: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Murakami, K.
登録日2021-04-22
公開日2022-04-27
最終更新日2023-05-17
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7MK9
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Complex structure of trailing EC of EC+EC (trailing EC-focused)
分子名称: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Murakami, K.
登録日2021-04-22
公開日2022-04-27
最終更新日2023-05-17
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
6JQ7
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BU of 6jq7 by Molmil
The ligand-free structure of human PPARgamma LBD in the presence of the SRC-1 coactivator peptide
分子名称: 16-mer peptide from Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
著者Jang, J.Y, Han, B.W.
登録日2019-03-29
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Sci Rep, 9, 2019
7MEI
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BU of 7mei by Molmil
Composite structure of EC+EC
分子名称: DNA (74-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Murakami, K.
登録日2021-04-06
公開日2022-03-02
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
6IJS
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BU of 6ijs by Molmil
Human PPARgamma ligand binding domain complexed with SB1494
分子名称: 16-mer peptide from Nuclear receptor coactivator 1, N-{[3-({[(1R,2S)-2-{[(2E)-2-cyano-4,4-dimethylpent-2-enoyl]amino}cyclopentyl]oxy}methyl)phenyl]methyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide, Peroxisome proliferator-activated receptor gamma
著者Jang, J.Y, Han, B.W.
登録日2018-10-11
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Sci Rep, 9, 2019
2K21
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BU of 2k21 by Molmil
NMR structure of human KCNE1 in LMPG micelles at pH 6.0 and 40 degree C
分子名称: Potassium voltage-gated channel subfamily E member
著者Kang, C, Tian, C, Sonnichsen, F.D, Smith, J.A, Meiler, J, George, A.L, Vanoye, C.G, Sanders, C.R, Kim, H.
登録日2008-03-19
公開日2008-12-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of KCNE1 and implications for how it modulates the KCNQ1 potassium channel.
Biochemistry, 47, 2008
2KDC
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NMR Solution Structure of E. coli diacylglycerol kinase (DAGK) in DPC micelles
分子名称: Diacylglycerol kinase
著者Van Horn, W.D, Kim, H, Ellis, C.D, Hadziselimovic, A, Sulistijo, E.S, Karra, M.D, Tian, C, Sonnichsen, F.D, Sanders, C.R.
登録日2009-01-06
公開日2009-07-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution nuclear magnetic resonance structure of membrane-integral diacylglycerol kinase
Science, 324, 2009
3SJF
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X-ray structure of human glutamate carboxypeptidase II in complex with a urea-based inhibitor (A25)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Plechanovova, A, Byun, Y, Alquicer, G, Skultetyova, L, Mlcochova, P, Nemcova, A, Kim, H, Navratil, M, Mease, R, Lubkowski, J, Pomper, M, Konvalinka, J, Rulisek, L, Barinka, C.
登録日2011-06-21
公開日2011-10-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Novel Substrate-Based Inhibitors of Human Glutamate Carboxypeptidase II with Enhanced Lipophilicity.
J.Med.Chem., 54, 2011

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