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7TAU
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BU of 7tau by Molmil
Refined capsid structure of human adenovirus D26 at 3.4 A resolution
分子名称: Fiber, Hexon protein, PIX, ...
著者Reddy, V.S, Yu, X, Barry, M.A.
登録日2021-12-21
公開日2022-03-16
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Refined Capsid Structure of Human Adenovirus D26 at 3.4 angstrom Resolution.
Viruses, 14, 2022
4X4J
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BU of 4x4j by Molmil
Structural and Functional Studies of BexE: Insights into Oxidation During BE-7585A Biosynthesis
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Putative oxygenase, SULFATE ION
著者Tsai, S.-C, Jackson, D.R, Patel, A, Barajas, J.F, Rohr, J, Yu, X, Liu, H.-W, Sasaki, E, Calveras, J, Metsa-Ketela, M.
登録日2014-12-02
公開日2015-12-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural and Functional Studies of BexE: Insights into Oxidation During BE-7585A Biosynthesis
To Be Published
8G59
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BU of 8g59 by Molmil
Cryo-EM structure of the TUG891 bound GPR120-Giq complex
分子名称: 3-{4-[(4-fluoro-4'-methyl[1,1'-biphenyl]-2-yl)methoxy]phenyl}propanoic acid, Free fatty acid receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Mao, C, Xiao, P, Tao, X, Qin, J, He, Q, Zhang, C, Yu, X, Zhang, Y, Sun, J.
登録日2023-02-12
公開日2023-03-08
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Unsaturated bond recognition leads to biased signal in a fatty acid receptor.
Science, 380, 2023
7JR7
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BU of 7jr7 by Molmil
Cryo-EM structure of ABCG5/G8 in complex with Fab 2E10 and 11F4
分子名称: ATP-binding cassette sub-family G member 5, ATP-binding cassette sub-family G member 8, Fab 11F4 heavy chain, ...
著者Huang, C.S, Yu, X, Min, X, Wang, Z, Zhang, H.
登録日2020-08-11
公開日2021-04-07
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of ABCG5/G8 in complex with modulating antibodies
Commun Biol, 4, 2021
5A2T
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BU of 5a2t by Molmil
The Molecular Basis for Flexibility in the Flexible Filamentous Plant Viruses
分子名称: BAMBOO MOSAIC VIRUS, COAT PROTEIN
著者DiMaio, F, Chen, C.C, Yu, X, Frenz, B, Hsu, Y.H, Lin, N.S, Egelman, E.H.
登録日2015-05-23
公開日2015-07-22
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献The Molecular Basis for Flexibility in the Flexible Filamentous Plant Viruses.
Nat.Struct.Mol.Biol., 22, 2015
2R8V
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BU of 2r8v by Molmil
Native structure of N-acetylglutamate synthase from Neisseria gonorrhoeae
分子名称: ACETYL COENZYME *A, Putative acetylglutamate synthase
著者Shi, D, Sagar, V, Jin, Z, Yu, X, Caldovic, L, Morizono, H, Allewell, N.M, Tuchman, M.
登録日2007-09-11
公開日2008-01-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
2R98
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BU of 2r98 by Molmil
Crystal Structure of N-acetylglutamate synthase (selenoMet substituted) from Neisseria gonorrhoeae
分子名称: ACETYL COENZYME *A, Putative acetylglutamate synthase
著者Shi, D, Sagar, V, Jin, Z, Yu, X, Caldovic, L, Morizono, H, Allewell, N.M, Tuchman, M.
登録日2007-09-12
公開日2008-01-15
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
3S6K
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BU of 3s6k by Molmil
Crystal structure of xcNAGS
分子名称: Acetylglutamate kinase
著者Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
登録日2011-05-25
公開日2012-04-18
実験手法X-RAY DIFFRACTION (2.8018 Å)
主引用文献A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S6G
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BU of 3s6g by Molmil
Crystal structures of Seleno-substituted mutant mmNAGS in space group P212121
分子名称: 1,2-ETHANEDIOL, COENZYME A, MALONATE ION, ...
著者Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
登録日2011-05-25
公開日2012-04-18
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.6681 Å)
主引用文献A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
8FW2
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BU of 8fw2 by Molmil
Cryo-EM structure of full-length human NLRC4 inflammasome with C11 symmetry
分子名称: NLR family CARD domain-containing protein 4
著者Matico, R.E, Yu, X, Miller, R, Somani, S, Ricketts, M.D, Kumar, N, Steele, R.A, Medley, Q, Berger, S, Faustin, B, Sharma, S.
登録日2023-01-20
公開日2024-01-03
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis of the human NAIP/NLRC4 inflammasome assembly and pathogen sensing.
Nat.Struct.Mol.Biol., 31, 2024
8FVU
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BU of 8fvu by Molmil
Cryo-EM structure of human Needle/NAIP/NLRC4 (R288A)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Baculoviral IAP repeat-containing protein 1, Lethal factor,Type III secretion system protein, ...
著者Matico, R.E, Yu, X, Miller, R, Somani, S, Ricketts, M.D, Kumar, N, Steele, R.A, Medley, Q, Berger, S, Faustin, B, Sharma, S.
登録日2023-01-19
公開日2024-01-03
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of the human NAIP/NLRC4 inflammasome assembly and pathogen sensing.
Nat.Struct.Mol.Biol., 31, 2024
8FW9
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BU of 8fw9 by Molmil
Cryo-EM structure of full-length human NLRC4 inflammasome with C12 symmetry
分子名称: NLR family CARD domain-containing protein 4
著者Matico, R.E, Yu, X, Miller, R, Somani, S, Ricketts, M.D, Kumar, N, Steele, R.A, Medley, Q, Berger, S, Faustin, B, Sharma, S.
登録日2023-01-20
公開日2024-01-03
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (4.46 Å)
主引用文献Structural basis of the human NAIP/NLRC4 inflammasome assembly and pathogen sensing.
Nat.Struct.Mol.Biol., 31, 2024
3S6H
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BU of 3s6h by Molmil
Crystal structure of native mmNAGS/k
分子名称: COENZYME A, GLUTAMIC ACID, N-acetylglutamate kinase / N-acetylglutamate synthase
著者Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
登録日2011-05-25
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3Q98
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BU of 3q98 by Molmil
Structure of ygeW encoded protein from E. coli
分子名称: transcarbamylase
著者Li, Y, Jing, Z, Yu, X, Allewell, N.M, Tuchman, M, Shi, D.
登録日2011-01-07
公開日2011-05-04
最終更新日2018-06-06
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献The ygeW encoded protein from Escherichia coli is a knotted ancestral catabolic transcarbamylase.
Proteins, 79, 2011
4E2I
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BU of 4e2i by Molmil
The Complex Structure of the SV40 Helicase Large T Antigen and p68 Subunit of DNA Polymerase Alpha-Primase
分子名称: DNA polymerase alpha subunit B, Large T antigen, ZINC ION
著者Zhou, B, Arnett, D.R, Yu, X, Brewster, A, Sowd, G.A, Xie, C.L, Vila, S, Gai, D, Fanning, E, Chen, X.S.
登録日2012-03-08
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase alpha-primase.
J.Biol.Chem., 287, 2012
3S7Y
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BU of 3s7y by Molmil
Crystal structure of mmNAGS in Space Group P3121 at 4.3 A resolution
分子名称: N-acetylglutamate kinase / N-acetylglutamate synthase
著者Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
登録日2011-05-27
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (4.3077 Å)
主引用文献A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3TXX
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BU of 3txx by Molmil
Crystal structure of putrescine transcarbamylase from Enterococcus faecalis
分子名称: Putrescine carbamoyltransferase, SULFATE ION
著者Shi, D, Yu, X, Zhao, G, Allewell, N.M, Tuchman, M.
登録日2011-09-23
公開日2012-02-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of putrescine transcarbamylase from Enterococcus faecalis: Structural insights into the oligomeric assembly and the active site
To be Published
5T7T
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BU of 5t7t by Molmil
Galectin-8 N terminal domain in complex with LNT
分子名称: CHLORIDE ION, Galectin-8, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Bohari, M.H, Yu, X, Blanchard, H.
登録日2016-09-05
公開日2017-01-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure-based rationale for differential recognition of lacto- and neolacto- series glycosphingolipids by the N-terminal domain of human galectin-8.
Sci Rep, 6, 2016
6KZQ
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BU of 6kzq by Molmil
structure of PTP-MEG2 and NSF-pY83 peptide complex
分子名称: NSF-pY83 peptide, Tyrosine-protein phosphatase non-receptor type 9
著者Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
登録日2019-09-25
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
6L03
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BU of 6l03 by Molmil
structure of PTP-MEG2 and MUNC18-1-pY145 peptide complex
分子名称: Tyrosine-protein phosphatase non-receptor type 9, stxbp1-pY145 peptide
著者Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
登録日2019-09-25
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.084 Å)
主引用文献PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
5J8R
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BU of 5j8r by Molmil
Crystal Structure of the Catalytic Domain of Human Protein Tyrosine Phosphatase non-receptor Type 12 - K61R mutant
分子名称: Tyrosine-protein phosphatase non-receptor type 12
著者Li, H, Yang, F, Xu, Y.F, Wang, W.J, Xiao, P, Yu, X, Sun, J.P.
登録日2016-04-08
公開日2016-04-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.043 Å)
主引用文献Crystal structure and substrate specificity of PTPN12.
Cell Rep, 15, 2016
3J9R
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BU of 3j9r by Molmil
Atomic structures of a bactericidal contractile nanotube in its pre- and post-contraction states
分子名称: sheath
著者Ge, P, Scholl, D, Leiman, P.G, Yu, X, Miller, J.F, Zhou, Z.H.
登録日2015-02-17
公開日2015-04-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states.
Nat.Struct.Mol.Biol., 22, 2015
3J9X
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BU of 3j9x by Molmil
A Virus that Infects a Hyperthermophile Encapsidates A-Form DNA
分子名称: DNA, coat protein
著者DiMaio, F, Yu, X, Rensen, E, Krupovic, M, Prangishvili, D, Egelman, E.
登録日2015-03-21
公開日2015-06-03
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献A virus that infects a hyperthermophile encapsidates A-form DNA.
Science, 348, 2015
2HI5
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BU of 2hi5 by Molmil
Model for bacteriophage fd from cryo-EM
分子名称: Coat protein B
著者Wang, Y.A, Yu, X, Overman, S, Tsuboi, M, Thomas, G.J, Egelman, E.H.
登録日2006-06-29
公開日2007-08-07
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献The Structure of a Filamentous Bacteriophage
J.Mol.Biol., 361, 2006
5U0P
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BU of 5u0p by Molmil
Cryo-EM structure of the transcriptional Mediator
分子名称: Mediator complex subunit 10, Mediator complex subunit 11, Mediator complex subunit 14, ...
著者Tsai, K.-L, Yu, X, Gopalan, S, Chao, T.-C, Zhang, Y, Florens, L, Washburn, M.P, Murakami, K, Conaway, R.C, Conaway, J.W, Asturias, F.
登録日2016-11-26
公開日2017-03-08
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Mediator structure and rearrangements required for holoenzyme formation.
Nature, 544, 2017

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