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8IDD
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BU of 8idd by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP bound FtsEX/RipC complex in peptidisc
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, Cell division protein FtsX, ...
著者Li, J, Xu, X, Luo, M.
登録日2023-02-12
公開日2023-10-04
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Regulation of the cell division hydrolase RipC by the FtsEX system in Mycobacterium tuberculosis.
Nat Commun, 14, 2023
6E11
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BU of 6e11 by Molmil
PTEX Core Complex in the Resetting (Compact) State
分子名称: Endogenous cargo polypeptide, Exported protein 2, Heat shock protein 101, ...
著者Ho, C, Lai, M, Zhou, Z.H.
登録日2018-07-08
公開日2018-08-22
最終更新日2019-11-27
実験手法ELECTRON MICROSCOPY (4.23 Å)
主引用文献Malaria parasite translocon structure and mechanism of effector export.
Nature, 561, 2018
6E0E
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BU of 6e0e by Molmil
Crystal structure of Glucokinase in complex with compound 6
分子名称: 2-({2-[(4-methyl-1,3-thiazol-2-yl)amino]pyridin-3-yl}oxy)benzonitrile, Glucokinase, alpha-D-glucopyranose
著者Hinklin, R.J, Baer, B.R, Boyd, S.A, Chicarelli, M.D, Condroski, K.R, DeWolf, W.E, Fischer, J, Frank, M, Hingorani, G.P, Lee, P.A, Neitzel, N.A, Pratt, S.A, Singh, A, Sullivan, F.X, Turner, T, Voegtli, W.C, Wallace, E.M, Williams, L, Aicher, T.D.
登録日2018-07-06
公開日2019-07-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery and preclinical development of AR453588 as an anti-diabetic glucokinase activator.
Bioorg.Med.Chem., 28, 2020
8IDB
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BU of 8idb by Molmil
Cryo-EM structure of Mycobacterium tuberculosis FtsEX complex in peptidisc
分子名称: Cell division ATP-binding protein FtsE, Cell division protein FtsX
著者Li, J, Xu, X, Luo, M.
登録日2023-02-12
公開日2023-10-04
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Regulation of the cell division hydrolase RipC by the FtsEX system in Mycobacterium tuberculosis.
Nat Commun, 14, 2023
6E14
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BU of 6e14 by Molmil
Handover mechanism of the growing pilus by the bacterial outer membrane usher FimD
分子名称: Chaperone protein FimC, Fimbrial biogenesis outer membrane usher protein, Protein FimF, ...
著者Du, M, Yuan, Z, Yu, H, Henderson, N, Sarowar, S, Zhao, G, Werneburg, G.T, Thanassi, D.G, Li, H.
登録日2018-07-09
公開日2018-10-17
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Handover mechanism of the growing pilus by the bacterial outer-membrane usher FimD.
Nature, 562, 2018
6E4D
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BU of 6e4d by Molmil
Atomic structure of Mycobacterium tuberculosis DppA
分子名称: Periplasmic dipeptide-binding lipoprotein DPPA, VAL-VAL-VAL-ALA
著者Ko, Y, Mitra, A, Niederweis, M, Cingolani, G.
登録日2018-07-17
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.252 Å)
主引用文献Heme and hemoglobin utilization by Mycobacterium tuberculosis.
Nat Commun, 10, 2019
6E4L
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BU of 6e4l by Molmil
The structure of the N-terminal domain of human clathrin heavy chain 1 (nTD) in complex with ES9
分子名称: 1,2-ETHANEDIOL, 5-bromo-N-(4-nitrophenyl)thiophene-2-sulfonamide, ACETATE ION, ...
著者Dejonghe, W, Sharma, I, Denoo, B, Munck, S.D, Bulut, H, Mylle, E, Vasileva, M, Lu, Q, Savatin, D.V, Mishev, K, Nerinckx, W, Staes, A, Drozdzecki, A, Audenaert, D, Madder, A, Friml, J, Damme, D.V, Gevaert, K, Haucke, V, Savvides, S, Winne, J, Russinova, E.
登録日2018-07-17
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Disruption of endocytosis through chemical inhibition of clathrin heavy chain function.
Nat.Chem.Biol., 15, 2019
6LLN
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BU of 6lln by Molmil
citronellol catabolism dehydrogenase (AtuB) [Pseudomonas aeruginosa PAO1]
分子名称: Putative dehydrogenase involved in catabolism of citronellol
著者Zhang, Q, Bartlam, M.
登録日2019-12-23
公開日2020-02-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of the Pseudomonas aeruginosa dehydrogenase AtuB involved in citronellol and geraniol catabolism.
Biochem.Biophys.Res.Commun., 523, 2020
6E24
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BU of 6e24 by Molmil
Ternary structure of c-Myc-TBP-TAF1
分子名称: Transcription initiation factor TFIID subunit 1,Myc proto-oncogene protein,TATA-box-binding protein
著者Wei, Y, Dong, A, Sunnerhagen, M, Penn, L, Tong, Y, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
登録日2018-07-10
公開日2019-10-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献Multiple direct interactions of TBP with the MYC oncoprotein.
Nat.Struct.Mol.Biol., 26, 2019
8I53
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BU of 8i53 by Molmil
Solution structure of the PH domain from the Tfb1 subunit of fission yeast TFIIH
分子名称: General transcription and DNA repair factor IIH subunit tfb1
著者Okuda, M, Nishimura, Y.
登録日2023-01-23
公開日2023-11-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural polymorphism of the PH domain in TFIIH.
Biosci.Rep., 43, 2023
6E6M
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BU of 6e6m by Molmil
Crystal structure of human cellular retinol-binding protein 1 in complex with cannabidiorcin (CBDO)
分子名称: (1'R,2'R)-4,5'-dimethyl-2'-(prop-1-en-2-yl)-1',2',3',4'-tetrahydro[1,1'-biphenyl]-2,6-diol, Retinol-binding protein 1
著者Silvaroli, J.A, Horwitz, S, Banerjee, S, Kiser, P.D, Golczak, M.
登録日2018-07-25
公開日2019-02-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Abnormal Cannabidiol Modulates Vitamin A Metabolism by Acting as a Competitive Inhibitor of CRBP1.
Acs Chem.Biol., 14, 2019
6LU2
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BU of 6lu2 by Molmil
Crystal structure of a substrate binding protein from Microbacterium hydrocarbonoxydans
分子名称: Substrate binding protein
著者Shimamura, K, Akiyama, T, Yokoyama, K, Takenoya, M, Ito, S, Sasaki, Y, Yajima, S.
登録日2020-01-25
公開日2020-03-25
最終更新日2020-04-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis of substrate recognition by the substrate binding protein (SBP) of a hydrazide transporter, obtained from Microbacterium hydrocarbonoxydans.
Biochem.Biophys.Res.Commun., 525, 2020
8IIZ
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BU of 8iiz by Molmil
Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K27ac peptide
分子名称: GLYCEROL, Histone H3.1, Maltodextrin-binding protein,YEATS domain-containing protein 4, ...
著者Kikuchi, M, Umehara, T.
登録日2023-02-24
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献GAS41 promotes H2A.Z deposition through recognition of the N terminus of histone H3 by the YEATS domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8IIY
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BU of 8iiy by Molmil
Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K14ac peptide
分子名称: GLYCEROL, Histone H3.1, Maltodextrin-binding protein,YEATS domain-containing protein 4, ...
著者Kikuchi, M, Umehara, T.
登録日2023-02-24
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献GAS41 promotes H2A.Z deposition through recognition of the N terminus of histone H3 by the YEATS domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
6E2B
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BU of 6e2b by Molmil
Ubiquitin in complex with Pt(2-phenilpyridine)(PPh3)
分子名称: GLYCEROL, SULFATE ION, Ubiquitin, ...
著者Zhemkov, V.A, Kim, M.
登録日2018-07-11
公開日2018-11-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Reactions of Cyclometalated Platinum(II) [Pt(N∧C)(PR3)Cl] Complexes with Imidazole and Imidazole-Containing Biomolecules: Fine-Tuning of Reactivity and Photophysical Properties via Ligand Design.
Inorg Chem, 58, 2019
8IJ0
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BU of 8ij0 by Molmil
Crystal structure of GAS41 YEATS domain in complex with H3K9ac peptide
分子名称: GLYCEROL, Histone H3.1, PENTAETHYLENE GLYCOL, ...
著者Kikuchi, M, Umehara, T.
登録日2023-02-24
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献GAS41 promotes H2A.Z deposition through recognition of the N terminus of histone H3 by the YEATS domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
4V3N
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BU of 4v3n by Molmil
Membrane bound pleurotolysin prepore (TMH2 strand lock) trapped with engineered disulphide cross-link
分子名称: PLEUROTOLYSIN A, PLEUROTOLYSIN B
著者Lukoyanova, N, Kondos, S.C, Farabella, I, Law, R.H.P, Reboul, C.F, Caradoc-Davies, T.T, Spicer, B.A, Kleifeld, O, Perugini, M, Ekkel, S, Hatfaludi, T, Oliver, K, Hotze, E.M, Tweten, R.K, Whisstock, J.C, Topf, M, Dunstone, M.A, Saibil, H.R.
登録日2014-10-20
公開日2015-02-18
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Conformational Changes During Pore Formation by the Perforin-Related Protein Pleurotolysin.
Plos Biol., 13, 2015
8IN4
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BU of 8in4 by Molmil
Eisenia hydrolysis-enhancing protein from Aplysia kurodai
分子名称: 25 kDa polyphenol-binding protein, ACETYL GROUP, GLYCEROL
著者Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M.
登録日2023-03-08
公開日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity.
Elife, 12, 2023
8IN1
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BU of 8in1 by Molmil
beta-glucosidase protein from Aplysia kurodai
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-Glucosidase, alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M.
登録日2023-03-08
公開日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity.
Elife, 12, 2023
8IN3
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BU of 8in3 by Molmil
Eisenia hydrolysis-enhancing protein from Aplysia kurodai
分子名称: 25 kDa polyphenol-binding protein, GLYCEROL
著者Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M.
登録日2023-03-08
公開日2023-11-15
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity.
Elife, 12, 2023
8IN6
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BU of 8in6 by Molmil
Eisenia hydrolysis-enhancing protein from Aplysia kurodai complex with tannic acid
分子名称: 25 kDa polyphenol-binding protein, BETA-1,2,3,4,6-PENTA-O-GALLOYL-D-GLUCOPYRANOSE
著者Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M.
登録日2023-03-08
公開日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity.
Elife, 12, 2023
8I09
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BU of 8i09 by Molmil
Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with butyl gallate
分子名称: CYSTEINE, PHOSPHATE ION, Serine acetyltransferase, ...
著者Toyomoto, T, Ono, K, Shiba, T, Momitani, K, Zhang, T, Tsutsuki, H, Ishikawa, T, Hoso, K, Hamada, K, Rahman, A, Zhong, H, Akaike, T, Yamamoto, K, Matsuoka, M, Hanaoka, K, Niidome, T, Sawa, T.
登録日2023-01-10
公開日2023-11-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Alkyl gallates inhibit serine O -acetyltransferase in bacteria and enhance susceptibility of drug-resistant Gram-negative bacteria to antibiotics.
Front Microbiol, 14, 2023
8I06
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BU of 8i06 by Molmil
Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with CoA
分子名称: COENZYME A, CYSTEINE, Serine acetyltransferase
著者Toyomoto, T, Ono, K, Shiba, T, Momitani, K, Zhang, T, Tsutsuki, H, Ishikawa, T, Hoso, K, Hamada, K, Rahman, A, Zhong, H, Akaike, T, Yamamoto, K, Matsuoka, M, Hanaoka, K, Niidome, T, Sawa, T.
登録日2023-01-10
公開日2023-11-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Alkyl gallates inhibit serine O -acetyltransferase in bacteria and enhance susceptibility of drug-resistant Gram-negative bacteria to antibiotics.
Front Microbiol, 14, 2023
6EGS
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BU of 6egs by Molmil
Crystal structure of the GalNAc-T2 F104S mutant in complex with UDP-GalNAc
分子名称: MANGANESE (II) ION, Polypeptide N-acetylgalactosaminyltransferase 2, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
著者de las Rivas, M, Coelho, H, Diniz, A, Lira-Navarrete, E, Jimenez-Barbero, J, Schjoldager, K.T, Bennett, E.P, Vakhrushev, S.Y, Clausen, H, Corzana, F, Marcelo, F, Hurtado-Guerrero, R.
登録日2017-09-12
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Analysis of a GalNAc-T2 Mutant Reveals an Induced-Fit Catalytic Mechanism for GalNAc-Ts.
Chemistry, 24, 2018
8I04
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BU of 8i04 by Molmil
Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with serine
分子名称: PHOSPHATE ION, SERINE, Serine acetyltransferase
著者Toyomoto, T, Ono, K, Shiba, T, Momitani, K, Zhang, T, Tsutsuki, H, Ishikawa, T, Hoso, K, Hamada, K, Rahman, A, Zhong, H, Akaike, T, Yamamoto, K, Matsuoka, M, Hanaoka, K, Niidome, T, Sawa, T.
登録日2023-01-10
公開日2023-11-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Alkyl gallates inhibit serine O -acetyltransferase in bacteria and enhance susceptibility of drug-resistant Gram-negative bacteria to antibiotics.
Front Microbiol, 14, 2023

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