Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2GJ9
DownloadVisualize
BU of 2gj9 by Molmil
Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and Rb+
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RUBIDIUM ION, ...
著者Scrima, A, Wittinghofer, A.
登録日2006-03-30
公開日2006-07-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dimerisation-dependent GTPase reaction of MnmE: how potassium acts as GTPase-activating element.
Embo J., 25, 2006
5EC8
DownloadVisualize
BU of 5ec8 by Molmil
DENGUE 3 NS5 METHYLTRANSFERASE BOUND TO S-ADENOSYL METHIONINE AND COMPOUND BF175
分子名称: 2-[(2-azanyl-4-chloranyl-phenyl)carbamoylamino]-4-methyl-benzoic acid, Genome polyprotein, S-ADENOSYLMETHIONINE
著者Barral, K, Bricogne, G, Sharff, A.
登録日2015-10-20
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.714 Å)
主引用文献Discovery of novel dengue virus NS5 methyltransferase non-nucleoside inhibitors by fragment-based drug design.
Eur.J.Med.Chem., 125, 2016
3F45
DownloadVisualize
BU of 3f45 by Molmil
Structure of the R75A mutant of rat alpha-Parvalbumin
分子名称: CALCIUM ION, Parvalbumin alpha, SULFATE ION
著者Hoh, F, Padilla, A.
登録日2008-10-31
公開日2009-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Removing the invariant salt bridge of parvalbumin increases flexibility in the AB-loop structure
Acta Crystallogr.,Sect.D, 65, 2009
3CA2
DownloadVisualize
BU of 3ca2 by Molmil
CRYSTALLOGRAPHIC STUDIES OF INHIBITOR BINDING SITES IN HUMAN CARBONIC ANHYDRASE II. A PENTACOORDINATED BINDING OF THE SCN-ION TO THE ZINC AT HIGH P*H
分子名称: 3-MERCURI-4-AMINOBENZENESULFONAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
著者Eriksson, A.E, Jones, T.A, Liljas, A.
登録日1989-10-02
公開日1990-01-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic studies of inhibitor binding sites in human carbonic anhydrase II: a pentacoordinated binding of the SCN- ion to the zinc at high pH.
Proteins, 4, 1988
3F4F
DownloadVisualize
BU of 3f4f by Molmil
Crystal structure of dUT1p, a dUTPase from Saccharomyces cerevisiae
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Singer, A.U, Evdokimova, E, Kudritska, M, Edwards, A.M, Yakunin, A.F, Savchenko, A.
登録日2008-10-31
公開日2008-11-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and activity of the Saccharomyces cerevisiae dUTP pyrophosphatase DUT1, an essential housekeeping enzyme.
Biochem.J., 437, 2011
5DL6
DownloadVisualize
BU of 5dl6 by Molmil
Crystal structure of Acinetobacter baumannii OccAB2
分子名称: Putative porin for vanillate trafficking (VanP)
著者Zahn, M, Basle, A, van den Berg, B.
登録日2015-09-04
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Insights into Outer Membrane Permeability of Acinetobacter baumannii.
Structure, 24, 2016
2L72
DownloadVisualize
BU of 2l72 by Molmil
Solution structure and dynamics of ADF from Toxoplasma gondii (TgADF)
分子名称: Actin depolymerizing factor, putative
著者Pathak, P.P, Shukla, V.K, Yadav, R, Jain, A, Srivastava, S, Tripathi, S, Pulavarti, S.V.S.R.K, Arora, A.
登録日2010-12-01
公開日2011-08-17
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of ADF from Toxoplasma gondii
J.Struct.Biol., 176, 2011
5HZ5
DownloadVisualize
BU of 5hz5 by Molmil
FABP5 in complex with 6-Chloro-4-phenyl-2-piperidin-1-yl-3-(1H-tetrazol-5-yl)-quinoline
分子名称: 6-chloro-4-phenyl-2-(piperidin-1-yl)-3-(1H-tetrazol-5-yl)quinoline, DIMETHYL SULFOXIDE, Fatty acid-binding protein, ...
著者Ehler, A, Rudolph, M.G.
登録日2016-02-02
公開日2017-01-25
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Design and synthesis of selective, dual fatty acid binding protein 4 and 5 inhibitors.
Bioorg. Med. Chem. Lett., 26, 2016
3AJ6
DownloadVisualize
BU of 3aj6 by Molmil
HA1 (HA33) mutant F179I of botulinum type C progenitor toxin complexed with N-acetylgalactosamine, bound at site II
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, Main hemagglutinin component
著者Nakamura, T, Tonozuka, T, Sato, R, Oguma, K, Nishikawa, A.
登録日2010-05-24
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Molecular diversity of the two sugar-binding sites of the beta-trefoil lectin HA33/C (HA1) from Clostridium botulinum type C neurotoxin
Arch.Biochem.Biophys., 512, 2011
1Z60
DownloadVisualize
BU of 1z60 by Molmil
Solution structure of the carboxy-terminal domain of human TFIIH P44 subunit
分子名称: TFIIH basal transcription factor complex p44 subunit, ZINC ION
著者Kellenberger, E, Dominguez, C, Fribourg, S, Wasielewski, E, Moras, D, Poterszman, A, Boelens, R, Kieffer, B.
登録日2005-03-21
公開日2005-04-12
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C-terminal domain of TFIIH P44 subunit reveals a novel type of C4C4 ring domain involved in protein-protein interactions.
J.Biol.Chem., 280, 2005
5DQ1
DownloadVisualize
BU of 5dq1 by Molmil
Endothiapepsin in complex with fragment 34
分子名称: 1,2-ETHANEDIOL, 3-[(cyclopropylamino)methyl]-8-ethylquinolin-2(1H)-one, Endothiapepsin, ...
著者Radeva, N, Uehlein, M, Weiss, M, Heine, A, Klebe, G.
登録日2015-09-14
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.489 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
To Be Published
2FG5
DownloadVisualize
BU of 2fg5 by Molmil
Crystal structure of human RAB31 in complex with a GTP analogue
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Rab-31
著者Tempel, W, Wang, J, Ismail, S, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2005-12-21
公開日2006-01-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Crystal structure of human RAB31 in complex with a GTP analogue
To be Published
4K55
DownloadVisualize
BU of 4k55 by Molmil
Structure of the extracellular domain of butyrophilin BTN3A1 in complex with (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate (HMBPP)
分子名称: (2E)-4-hydroxy-3-methylbut-2-en-1-yl trihydrogen diphosphate, Butyrophilin subfamily 3 member A1
著者Kumar, A, Mori, L, De Libero, G.
登録日2013-04-13
公開日2013-07-24
最終更新日2013-09-25
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Butyrophilin 3A1 binds phosphorylated antigens and stimulates human gamma delta T cells.
Nat.Immunol., 14, 2013
1DCS
DownloadVisualize
BU of 1dcs by Molmil
DEACETOXYCEPHALOSPORIN C SYNTHASE FROM S. CLAVULIGERUS
分子名称: DEACETOXYCEPHALOSPORIN C SYNTHASE, SULFATE ION
著者Valegard, K, Terwisscha Van Scheltinga, A.C, Lloyd, M.D, Hara, T, Ramaswamy, S, Perrakis, A, Thompson, A, Lee, H.J, Baldwin, J.E, Schofield, C.J, Hajdu, J, Andersson, I.
登録日1998-06-05
公開日1999-06-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of a cephalosporin synthase.
Nature, 394, 1998
1INV
DownloadVisualize
BU of 1inv by Molmil
A SIALIC ACID DERIVED PHOSPHONATE ANALOG INHIBITS DIFFERENT STRAINS OF INFLUENZA VIRUS NEURAMINIDASE WITH DIFFERENT EFFICIENCIES
分子名称: (1R)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者White, C.L, Janakiraman, M.N, Laver, W.G, Philippon, C, Vasella, A, Air, G.M, Luo, M.
登録日1994-09-26
公開日1995-02-07
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A sialic acid-derived phosphonate analog inhibits different strains of influenza virus neuraminidase with different efficiencies.
J.Mol.Biol., 245, 1995
2L12
DownloadVisualize
BU of 2l12 by Molmil
Solution NMR structure of the chromobox protein 7 with H3K9me3
分子名称: Chromobox homolog 7, Histone H3
著者Kaustov, L, Lemak, A, Gutmanas, A, Fares, C, Quang, H, Loppnau, P, Min, J, Edwards, A, Arrowsmith, C, Structural Genomics Consortium (SGC)
登録日2010-07-22
公開日2010-08-04
最終更新日2020-02-05
実験手法SOLUTION NMR
主引用文献Recognition and specificity determinants of the human cbx chromodomains.
J.Biol.Chem., 286, 2011
1Z7J
DownloadVisualize
BU of 1z7j by Molmil
Human transthyretin (also called prealbumin) complex with 3, 3',5,5'-tetraiodothyroacetic acid (t4ac)
分子名称: 3,3',5,5'-TETRAIODOTHYROACETIC ACID, Transthyretin
著者Neumann, P, Wojtczak, A, Cody, V.
登録日2005-03-25
公開日2005-06-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Ligand binding at the transthyretin dimer-dimer interface: structure of the transthyretin-T4Ac complex at 2.2 Angstrom resolution.
Acta Crystallogr.,Sect.D, 61, 2005
5SZC
DownloadVisualize
BU of 5szc by Molmil
Structure of human Dpf3 double-PHD domain bound to histone H3 tail peptide with monomethylated K4 and acetylated K14
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Histone H3 tail peptide, ZINC ION, ...
著者Singh, N, Local, A, Shiau, A, Ren, B, Corbett, K.D.
登録日2016-08-13
公開日2017-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.193 Å)
主引用文献Identification of H3K4me1-associated proteins at mammalian enhancers.
Nat. Genet., 50, 2018
1DK1
DownloadVisualize
BU of 1dk1 by Molmil
DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX
分子名称: 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, POTASSIUM ION, ...
著者Nikulin, A, Serganov, A, Ennifar, E, Tischenko, S, Nevskaya, N.
登録日1999-12-06
公開日2000-04-02
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the S15-rRNA complex.
Nat.Struct.Biol., 7, 2000
3AJ5
DownloadVisualize
BU of 3aj5 by Molmil
HA1 (HA33) subcomponent of botulinum type C progenitor toxin complexed with N-acetylgalactosamine, bound at site II
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, Main hemagglutinin component
著者Nakamura, T, Tonozuka, T, Sato, R, Oguma, K, Nishikawa, A.
登録日2010-05-24
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular diversity of the two sugar-binding sites of the beta-trefoil lectin HA33/C (HA1) from Clostridium botulinum type C neurotoxin
Arch.Biochem.Biophys., 512, 2011
2Y42
DownloadVisualize
BU of 2y42 by Molmil
Structure of Isopropylmalate dehydrogenase from Thermus thermophilus - complex with NADH and Mn
分子名称: 3-ISOPROPYLMALATE DEHYDROGENASE, BICINE, MANGANESE (II) ION, ...
著者Graczer, E, merlin, A, Singh, R.K, Manikandan, K, Zavodsky, P, Weiss, M.S, Vas, M.
登録日2011-01-04
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Atomic Level Description of the Domain Closure in a Dimeric Enzyme: Thermus Thermophilus 3-Isopropylmalate Dehydrogenase.
Mol.Biosyst., 7, 2011
1DKE
DownloadVisualize
BU of 1dke by Molmil
NI BETA HEME HUMAN HEMOGLOBIN
分子名称: HEMOGLOBIN: ALPHA CHAIN, HEMOGLOBIN: BETA CHAIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Bruno, S, Bettatti, S, Mozzarelli, A, Bolognesi, M, Deriu, D, Rosano, C, Tsuneshige, A, Yonetani, T, Henry, E.R.
登録日1999-12-07
公開日2000-05-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Oxygen binding by alpha(Fe2+)2beta(Ni2+)2 hemoglobin crystals.
Protein Sci., 9, 2000
1DEK
DownloadVisualize
BU of 1dek by Molmil
DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE COMPLEXED WITH DEOXY-GMP
分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE, MAGNESIUM ION
著者Teplyakov, A, Sebastiao, P.
登録日1996-01-09
公開日1997-01-11
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of bacteriophage T4 deoxynucleotide kinase with its substrates dGMP and ATP.
EMBO J., 15, 1996
3GW6
DownloadVisualize
BU of 3gw6 by Molmil
Intramolecular Chaperone
分子名称: BROMIDE ION, CALCIUM ION, CHLORIDE ION, ...
著者Schulz, E.C, Dickmanns, A, Ficner, R.
登録日2009-03-31
公開日2010-02-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of an intramolecular chaperone mediating triple-beta-helix folding.
Nat.Struct.Mol.Biol., 17, 2010
2LK9
DownloadVisualize
BU of 2lk9 by Molmil
Structure of BST-2/Tetherin Transmembrane Domain
分子名称: Bone marrow stromal antigen 2
著者Skasko, M, Wang, Y, Tian, Y, Tokarev, A, Munguia, J, Ruiz, A, Stephens, E, Opella, S, Guatelli, J.
登録日2011-10-07
公開日2011-11-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献HIV-1 Vpu Protein Antagonizes Innate Restriction Factor BST-2 via Lipid-embedded Helix-Helix Interactions.
J.Biol.Chem., 287, 2012

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon