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Geometrically programmable nanomaterial construction using regularized protein building blocks
分子名称:	THR5
著者	Huddy, T, Bera, A.K, Baker, D, Kang, A.
登録日	2023-02-22
公開日	2024-03-13
最終更新日	2024-04-10
実験手法	X-RAY DIFFRACTION (2.93 Å)
主引用文献	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

4GU3

Crystal structure of the T1L reovirus attachment protein sigma1 in complex with the GM2 glycan
分子名称:	N-acetyl-alpha-neuraminic acid-(2-3)-[2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Outer capsid protein sigma-1
著者	Reiss, K, Stehle, T.
登録日	2012-08-29
公開日	2012-12-05
最終更新日	2024-02-28
実験手法	X-RAY DIFFRACTION (3.6 Å)
主引用文献	The GM2 Glycan Serves as a Functional Coreceptor for Serotype 1 Reovirus. Plos Pathog., 8, 2012

2JWP

Malectin
分子名称:	Malectin
著者	Schallus, T, Muhle-goll, C.
登録日	2007-10-23
公開日	2008-08-12
最終更新日	2024-05-29
実験手法	SOLUTION NMR
主引用文献	Malectin: A Novel Carbohydrate-binding Protein of the Endoplasmic Reticulum and a Candidate Player in the Early Steps of Protein N-Glycosylation Mol.Cell.Biol., 19, 2008

4FQ2

Crystal Structure of 10-1074 Fab
分子名称:	1,2-ETHANEDIOL, Fab heavy chain, Fab light chain, ...
著者	Scharf, L, Bjorkman, P.J.
登録日	2012-06-24
公開日	2012-11-14
最終更新日	2021-05-19
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies. Proc.Natl.Acad.Sci.USA, 109, 2012

2K46

Xenopus laevis malectin complexed with nigerose (Glcalpha1-3Glc)
分子名称:	MGC80075 protein, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose
著者	Schallus, T.
登録日	2008-05-28
公開日	2008-08-12
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	Malectin: A Novel Carbohydrate-binding Protein of the Endoplasmic Reticulum and a Candidate Player in the Early Steps of Protein N-Glycosylation Mol.Cell.Biol., 19, 2008

4FQC

Crystal Structure of PGT121 Fab Bound to a complex-type sialylated N-glycan
分子名称:	Fab heavy chain, Fab light chain, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者	Scharf, L, Bjorkman, P.J.
登録日	2012-06-25
公開日	2012-11-14
最終更新日	2021-05-19
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies. Proc.Natl.Acad.Sci.USA, 109, 2012

4FQQ

Crystal Structure of Germline Antibody PGT121-GL Fab
分子名称:	Fab heavy chain, Fab light chain, SODIUM ION
著者	Scharf, L, Bjorkman, P.J.
登録日	2012-06-25
公開日	2012-11-14
最終更新日	2021-05-19
実験手法	X-RAY DIFFRACTION (2.42 Å)
主引用文献	Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies. Proc.Natl.Acad.Sci.USA, 109, 2012

7XP0

Crystal structure of PmiR from Pseudomonas aeruginosa
分子名称:	Probable transcriptional regulator, SULFATE ION, ZINC ION
著者	Zhang, Y.X, Liang, H.H, Gan, J.H.
登録日	2022-05-02
公開日	2023-04-12
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (2.61 Å)
主引用文献	PmiR senses 2-methylisocitrate levels to regulate bacterial virulence in Pseudomonas aeruginosa. Sci Adv, 8, 2022

4EJN

Crystal structure of autoinhibited form of AKT1 in complex with N-(4-(5-(3-acetamidophenyl)-2-(2-aminopyridin-3-yl)-3H-imidazo[4,5-b]pyridin-3-yl)benzyl)-3-fluorobenzamide
分子名称:	1,2-ETHANEDIOL, 2-BUTANOL, N-(4-{5-[3-(acetylamino)phenyl]-2-(2-aminopyridin-3-yl)-3H-imidazo[4,5-b]pyridin-3-yl}benzyl)-3-fluorobenzamide, ...
著者	Eathiraj, S.
登録日	2012-04-06
公開日	2012-05-23
最終更新日	2013-01-02
実験手法	X-RAY DIFFRACTION (2.19 Å)
主引用文献	Discovery and optimization of a series of 3-(3-phenyl-3H-imidazo[4,5-b]pyridin-2-yl)pyridin-2-amines: orally bioavailable, selective, and potent ATP-independent Akt inhibitors. J.Med.Chem., 55, 2012

6K4L

Crystal structure of Se-labelled SidJ complex with CaM at 2.95 A
分子名称:	CALCIUM ION, CHLORIDE ION, Calmodulin-1, ...
著者	Ouyang, S.Y.
登録日	2019-05-24
公開日	2019-07-24
最終更新日	2019-08-28
実験手法	X-RAY DIFFRACTION (2.949 Å)
主引用文献	Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase. Nature, 572, 2019

4GU4

Crystal structure of the T1L reovirus attachment protein sigma1 in complex with alpha-2,3-sialyllactose
分子名称:	N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Outer capsid protein sigma-1
著者	Reiss, K, Stehle, T.
登録日	2012-08-29
公開日	2012-12-05
最終更新日	2024-02-28
実験手法	X-RAY DIFFRACTION (3.5 Å)
主引用文献	The GM2 Glycan Serves as a Functional Coreceptor for Serotype 1 Reovirus. Plos Pathog., 8, 2012

2LL4

HADDOCK structure of TgMIC4-A5/lacto-N-biose complex, based on NOE-derived distance restraints
分子名称:	Micronemal protein 4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者	Cowper, B, Matthews, S.
登録日	2011-10-26
公開日	2012-04-04
最終更新日	2020-07-29
実験手法	SOLUTION NMR
主引用文献	Galactose Recognition by the Apicomplexan Parasite Toxoplasma gondii. J.Biol.Chem., 287, 2012

7X0Y

Cryo-EM Structure of Arabidopsis CRY2 tetramer in complex with CIB1 fragment
分子名称:	CIB1 fragment, Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
著者	Hao, Y.H, Zhang, X, Zhang, P.
登録日	2022-02-22
公開日	2023-01-04
最終更新日	2024-06-26
実験手法	ELECTRON MICROSCOPY (3.89 Å)
主引用文献	Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling. Plant Commun., 4, 2023

7X0X

Cryo-EM Structure of Arabidopsis CRY2 in active conformation
分子名称:	Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
著者	Hao, Y.H, Zhang, X, Zhang, P.
登録日	2022-02-22
公開日	2023-01-04
最終更新日	2024-06-26
実験手法	ELECTRON MICROSCOPY (2.56 Å)
主引用文献	Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling. Plant Commun., 4, 2023

2LBO

Eimeria tenella microneme protein 3 MAR_B domain
分子名称:	Microneme protein 3
著者	Lai, L, Garnett, J, Simpson, P, Matthews, S.
登録日	2011-04-05
公開日	2011-11-16
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	The Role of Sialyl Glycan Recognition in Host Tissue Tropism of the Avian Parasite Eimeria tenella Plos Pathog., 7, 2011

7X88

Crystal structure of ENL YEATS domain T2 mutant in complex with histone H3 acetylation at K27
分子名称:	CITRIC ACID, Histone H3K27ac(24-27) peptide, Protein ENL
著者	Li, Y.Y, Li, H.T.
登録日	2022-03-11
公開日	2023-01-18
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.25 Å)
主引用文献	Hotspot mutations in the structured ENL YEATS domain link aberrant transcriptional condensates and cancer. Mol.Cell, 82, 2022

6K4R

Crystal structure of SidJ-CaM-AMP ternary complex at 3.11 A
分子名称:	ADENOSINE MONOPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者	Ouyang, S.Y.
登録日	2019-05-26
公開日	2019-07-24
最終更新日	2024-03-27
実験手法	X-RAY DIFFRACTION (3.109 Å)
主引用文献	Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase. Nature, 572, 2019

6K4K

Crystal structure of SidJ-CaM binary complex at 2.71 A
分子名称:	CALCIUM ION, Calmodulin-1, SidJ
著者	Ouyang, S.Y.
登録日	2019-05-24
公開日	2019-07-24
最終更新日	2024-03-27
実験手法	X-RAY DIFFRACTION (2.715 Å)
主引用文献	Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase. Nature, 572, 2019

2LL3

The solution structure of TgMIC4 apple-5 domain
分子名称:	Micronemal protein 4
著者	Cowper, B, Matthews, S.
登録日	2011-10-26
公開日	2012-04-04
最終更新日	2023-06-14
実験手法	SOLUTION NMR
主引用文献	Galactose Recognition by the Apicomplexan Parasite Toxoplasma gondii. J.Biol.Chem., 287, 2012

4HJU

Transthyretin in complex with (E)-N-(3-(4-hydroxy-3,5-dimethylstyryl)phenyl)acrylamide
分子名称:	N-{3-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]phenyl}prop-2-enamide, Transthyretin
著者	Connelly, S, Wilson, I.A.
登録日	2012-10-14
公開日	2013-12-04
最終更新日	2023-09-20
実験手法	X-RAY DIFFRACTION (1.35 Å)
主引用文献	Stilbene vinyl sulfonamides as fluorogenic sensors of and traceless covalent kinetic stabilizers of transthyretin that prevent amyloidogenesis. J.Am.Chem.Soc., 135, 2013

4HJT

Kinetic stabilization of transthyretin through covalent modification of K15 by (E)-N-(4-(4-hydroxy-3,5-dimethylstyryl)phenyl)propionamide
分子名称:	N-{4-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]phenyl}propanamide, Transthyretin
著者	Connelly, S, Wilson, I.A.
登録日	2012-10-14
公開日	2013-12-04
最終更新日	2023-09-20
実験手法	X-RAY DIFFRACTION (1.45 Å)
主引用文献	Stilbene vinyl sulfonamides as fluorogenic sensors of and traceless covalent kinetic stabilizers of transthyretin that prevent amyloidogenesis. J.Am.Chem.Soc., 135, 2013

2NP9

Crystal structure of a dioxygenase in the Crotonase superfamily
分子名称:	DpgC, OXYGEN MOLECULE, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者	Bruner, S.D, Widboom, P.F, Fielding, E.N.
登録日	2006-10-26
公開日	2007-05-22
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (2.45 Å)
主引用文献	Structural basis for cofactor-independent dioxygenation in vancomycin biosynthesis. Nature, 447, 2007

4HJS

Kinetic stabilization of transthyretin through covalent modification of K15 by (E)-N-(4-(4-hydroxy-3,5-dimethylstyryl)ethanesulfonamide
分子名称:	N-{4-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]phenyl}ethanesulfonamide, Transthyretin
著者	Connelly, S, Wilson, I.A.
登録日	2012-10-14
公開日	2013-12-04
最終更新日	2023-09-20
実験手法	X-RAY DIFFRACTION (1.22 Å)
主引用文献	Stilbene vinyl sulfonamides as fluorogenic sensors of and traceless covalent kinetic stabilizers of transthyretin that prevent amyloidogenesis. J.Am.Chem.Soc., 135, 2013

4HJO

Crystal structure of the inactive EGFR tyrosine kinase domain with erlotinib
分子名称:	Epidermal growth factor receptor, [6,7-BIS(2-METHOXY-ETHOXY)QUINAZOLINE-4-YL]-(3-ETHYNYLPHENYL)AMINE
著者	Park, J.H, Lemmon, M.A.
登録日	2012-10-13
公開日	2012-11-14
最終更新日	2023-09-20
実験手法	X-RAY DIFFRACTION (2.75 Å)
主引用文献	Erlotinib binds both inactive and active conformations of the EGFR tyrosine kinase domain. Biochem.J., 448, 2012

2M50

Analysis of the structural and molecular basis of voltage-sensitive sodium channel inhibition by the spider toxin, Huwentoxin-IV (-TRTX-Hh2a).
分子名称:	Mu-theraphotoxin-Hh2a
著者	Gibbs, A, Minassian, N, Flinspach, M, Wickenden, A.
登録日	2013-02-12
公開日	2013-06-19
最終更新日	2023-11-29
実験手法	SOLUTION NMR
主引用文献	Analysis of the Structural and Molecular Basis of Voltage-sensitive Sodium Channel Inhibition by the Spider Toxin Huwentoxin-IV ( mu-TRTX-Hh2a). J.Biol.Chem., 288, 2013

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