Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2IE3
DownloadVisualize
BU of 2ie3 by Molmil
Structure of the Protein Phosphatase 2A Core Enzyme Bound to Tumor-inducing Toxins
分子名称: MANGANESE (II) ION, Protein Phosphatase 2, regulatory subunit A (PR 65), ...
著者Xing, Y, Xu, Y, Chen, Y, Jeffrey, P.D, Chao, Y, Shi, Y.
登録日2006-09-17
公開日2006-11-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of Protein Phosphatase 2A Core Enzyme Bound to Tumor-Inducing Toxins
Cell(Cambridge,Mass.), 127, 2006
9M3O
DownloadVisualize
BU of 9m3o by Molmil
Crystal structure of human pyruvate dehydrogenase kinase isoform 1 in complex with ATP competitive inhibitor 8
分子名称: 6-fluoranyl-8-(methylamino)-N-(pyrimidin-5-ylmethyl)-9H-pyrido[2,3-b]indole-3-carboxamide, GLYCEROL, POTASSIUM ION, ...
著者Xu, Z.H, Chen, S.
登録日2025-03-03
公開日2025-04-02
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Discovery of ATP competitive PDHK1/2 dual inhibitors.
Bioorg.Med.Chem.Lett., 122, 2025
9M3P
DownloadVisualize
BU of 9m3p by Molmil
Crystal structure of human pyruvate dehydrogenase kinase isoform 1 in complex with ATP competitive inhibitor 3
分子名称: GLYCEROL, N-[4-(2-chloro-5-methylpyrimidin-4-yl)phenyl]-N-(4-{[(difluoroacetyl)amino]methyl}benzyl)-2,4-dihydroxybenzamide, POTASSIUM ION, ...
著者Xu, Z.H, Chen, S.
登録日2025-03-03
公開日2025-04-02
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Discovery of ATP competitive PDHK1/2 dual inhibitors.
Bioorg.Med.Chem.Lett., 122, 2025
9LSD
DownloadVisualize
BU of 9lsd by Molmil
Crystal structure of a polyketide cyclase FasU from Streptomyces kanamyceticus
分子名称: 2-(2-ETHOXYETHOXY)ETHANOL, Antibiotic biosynthesis monooxygenase, MAGNESIUM ION
著者Luo, S, Zhu, C.
登録日2025-02-04
公開日2025-03-12
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献A Stereoselective Decarboxylative Aromatase/Cyclase Directs the Biosynthesis of an Axially Chiral Biphenyl Framework in Fasamycin.
J.Am.Chem.Soc., 147, 2025
6LPW
DownloadVisualize
BU of 6lpw by Molmil
Structure of Spermidine disinapoyl transferases(SDT) from Arabidopsis thaliana
分子名称: SPERMIDINE, Spermidine sinapoyl-CoA acyltransferase
著者Wang, C.Y, Zhang, P.
登録日2020-01-12
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural and Biochemical Insights Into Two BAHD Acyltransferases ( At SHT and At SDT) Involved in Phenolamide Biosynthesis.
Front Plant Sci, 11, 2020
7F6L
DownloadVisualize
BU of 7f6l by Molmil
Crystal structure of human MUS81-EME2 complex
分子名称: Crossover junction endonuclease MUS81, Probable crossover junction endonuclease EME2
著者Hua, Z.K, Zhang, D.P, Yuan, C, Lin, Z.H.
登録日2021-06-25
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of the human MUS81-EME2 complex.
Structure, 30, 2022
6LPV
DownloadVisualize
BU of 6lpv by Molmil
structure of Spermidine hydroxycinnamoyl transferases from Arabidopsis thaliana
分子名称: COENZYME A, SPERMIDINE, Spermidine hydroxycinnamoyl transferase
著者Wang, C.Y, Zhang, P.
登録日2020-01-12
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.297 Å)
主引用文献Structural and Biochemical Insights Into Two BAHD Acyltransferases ( At SHT and At SDT) Involved in Phenolamide Biosynthesis.
Front Plant Sci, 11, 2020
4WXM
DownloadVisualize
BU of 4wxm by Molmil
FleQ REC domain from Pseudomonas aeruginosa PAO1
分子名称: Transcriptional regulator FleQ
著者Su, T, Liu, S, Gu, L.
登録日2014-11-14
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The REC domain mediated dimerization is critical for FleQ from Pseudomonas aeruginosa to function as a c-di-GMP receptor and flagella gene regulator
J.Struct.Biol., 192, 2015
6O6W
DownloadVisualize
BU of 6o6w by Molmil
Solution structure of human myeloid-derived growth factor
分子名称: Myeloid-derived growth factor
著者Bortnov, V, Tonelli, M, Lee, W, Markley, J.L, Mosher, D.F.
登録日2019-03-07
公開日2019-11-13
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献Solution structure of human myeloid-derived growth factor suggests a conserved function in the endoplasmic reticulum.
Nat Commun, 10, 2019
8ZCA
DownloadVisualize
BU of 8zca by Molmil
Crystal structure of human CD47 ECD bound to Fab of Hu1C8
分子名称: 1C8 Fab heavy chain, 1C8 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, Z, Ding, J.
登録日2024-04-29
公開日2025-05-07
最終更新日2025-07-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An anti-CD47 antibody binds to a distinct epitope in a novel metal ion-dependent manner to minimize cross-linking of red blood cells.
J.Biol.Chem., 2025
6VZA
DownloadVisualize
BU of 6vza by Molmil
Crystal structure of cytochrome P450 NasF5053 Q65I-A86G mutant variant from Streptomyces sp. NRRL F-5053 in the cyclo-L-Trp-L-Pro-bound state
分子名称: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, CALCIUM ION, CHLORIDE ION, ...
著者Luo, Z, Jia, X, Sun, C, Qu, X, Kobe, B.
登録日2020-02-28
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Molecular basis of regio- and stereo-specificity in biosynthesis of bacterial heterodimeric diketopiperazines.
Nat Commun, 11, 2020
6VXV
DownloadVisualize
BU of 6vxv by Molmil
Crystal structure of cyclo-L-Trp-L-Pro-bound cytochrome P450 NasF5053 from Streptomyces sp. NRRL F-5053
分子名称: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Luo, Z, Jia, X, Sun, C, Qu, X, Kobe, B.
登録日2020-02-24
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular basis of regio- and stereo-specificity in biosynthesis of bacterial heterodimeric diketopiperazines.
Nat Commun, 11, 2020
6W0S
DownloadVisualize
BU of 6w0s by Molmil
Crystal structure of substrate free cytochrome P450 NasF5053 from Streptomyces sp. NRRL F-5053
分子名称: BROMIDE ION, CHLORIDE ION, GLYCEROL, ...
著者Luo, Z, Jia, X, Sun, C, Qu, X, Kobe, B.
登録日2020-03-02
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular basis of regio- and stereo-specificity in biosynthesis of bacterial heterodimeric diketopiperazines.
Nat Commun, 11, 2020
6VZB
DownloadVisualize
BU of 6vzb by Molmil
Crystal structure of cytochrome P450 NasF5053 S284A-V288A mutant variant from Streptomyces sp. NRRL F-5053 in the cyclo-L-Trp-L-Pro-bound state
分子名称: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
著者Luo, Z, Jia, X, Sun, C, Qu, X, Kobe, B.
登録日2020-02-28
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Molecular basis of regio- and stereo-specificity in biosynthesis of bacterial heterodimeric diketopiperazines.
Nat Commun, 11, 2020
6TYY
DownloadVisualize
BU of 6tyy by Molmil
Hedgehog autoprocessing mutant D46H
分子名称: Protein hedgehog
著者Li, H, Li, Z, Wang, C, Callahan, B.P.
登録日2019-08-09
公開日2019-11-20
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献General Base Swap Preserves Activity and Expands Substrate Tolerance in Hedgehog Autoprocessing.
J.Am.Chem.Soc., 141, 2019
1B4W
DownloadVisualize
BU of 1b4w by Molmil
BASIC PHOSPHOLIPASE A2 FROM AGKISTRODON HALYS PALLAS-IMPLICATIONS FOR ITS ASSOCIATION AND ANTICOAGULANT ACTIVITIES BY X-RAY CRYSTALLOGRAPHY
分子名称: PROTEIN (PHOSPHOLIPASE A2), octyl beta-D-glucopyranoside
著者Zhao, K.H, Lin, Z.J.
登録日1998-12-30
公開日2000-01-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of basic phospholipase A2 from Agkistrodon halys Pallas: implications for its association, hemolytic and anticoagulant activities.
Toxicon, 38, 2000
9KHV
DownloadVisualize
BU of 9khv by Molmil
Structure of DdmD dimer with ssDNA without nucleotide
分子名称: DNA (5'-D(P*AP*AP*CP*AP*TP*TP*AP*CP*AP*AP*AP*A)-3'), DNA (5'-D(P*AP*CP*AP*TP*TP*AP*CP*AP*AP*AP*AP*T)-3'), Helicase/UvrB N-terminal domain-containing protein
著者Lin, Z.H, Gao, H.S, Liu, Y.S, Li, R.Y.
登録日2024-11-11
公開日2025-02-19
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献A gate-clamp mechanism for ssDNA translocation by DdmD in Vibrio cholerae plasmid defense.
Nucleic Acids Res., 53, 2025
9KI0
DownloadVisualize
BU of 9ki0 by Molmil
structure of DdmD dimer with ssDNA with AGS
分子名称: DNA (5'-D(P*CP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Helicase/UvrB N-terminal domain-containing protein, ...
著者Lin, Z.H, Gao, H.S, Liu, Y.S, Li, R.Y.
登録日2024-11-11
公開日2025-02-19
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献A gate-clamp mechanism for ssDNA translocation by DdmD in Vibrio cholerae plasmid defense.
Nucleic Acids Res., 53, 2025
9KHZ
DownloadVisualize
BU of 9khz by Molmil
Structure of DdmD dimer with ssDNA with ADP bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*CP*CP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*CP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), ...
著者Lin, Z.H, Gao, H.S, Liu, Y.S, Li, R.Y.
登録日2024-11-11
公開日2025-02-19
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献A gate-clamp mechanism for ssDNA translocation by DdmD in Vibrio cholerae plasmid defense.
Nucleic Acids Res., 53, 2025
5JJU
DownloadVisualize
BU of 5jju by Molmil
Crystal structure of Rv2837c complexed with 5'-pApA and 5'-AMP
分子名称: ADENOSINE MONOPHOSPHATE, MANGANESE (II) ION, RNA (5'-R(P*AP*A)-3'), ...
著者Wang, F, He, Q, Liu, S, Gu, L.
登録日2016-04-25
公開日2016-05-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.312 Å)
主引用文献Structural and biochemical insight into the mechanism of Rv2837c from Mycobacterium tuberculosis as a c-di-NMP phosphodiesterase
J.Biol.Chem., 291, 2016
8HO1
DownloadVisualize
BU of 8ho1 by Molmil
Crystal structure of cytochrome P450 NasF5053 mutant F387G
分子名称: CALCIUM ION, Cytochrome P450-F5053, PROTOPORPHYRIN IX CONTAINING FE
著者Ma, B.D, Tian, W, Qu, X, Kong, X.D.
登録日2022-12-09
公開日2023-04-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Engineering the Substrate Specificity of a P450 Dimerase Enables the Collective Biosynthesis of Heterodimeric Tryptophan-Containing Diketopiperazines.
Angew.Chem.Int.Ed.Engl., 62, 2023
8HNZ
DownloadVisualize
BU of 8hnz by Molmil
Crystal structure of cytochrome P450 NasF5053 mutant E73S complexed with 6FCWP
分子名称: (3~{S},8~{a}~{S})-3-[(5-fluoranyl-1~{H}-indol-3-yl)methyl]-2,3,6,7,8,8~{a}-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, CALCIUM ION, Cytochrome P450-F5053, ...
著者Ma, B.D, Tian, W, Qu, X, Kong, X.D.
登録日2022-12-09
公開日2023-04-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Engineering the Substrate Specificity of a P450 Dimerase Enables the Collective Biosynthesis of Heterodimeric Tryptophan-Containing Diketopiperazines.
Angew.Chem.Int.Ed.Engl., 62, 2023
8HO0
DownloadVisualize
BU of 8ho0 by Molmil
Crystal structure of cytochrome P450 NasF5053 mutant E73S complexed with 8FCWP
分子名称: (3~{S},8~{a}~{S})-3-[(7-fluoranyl-1~{H}-indol-3-yl)methyl]-2,3,6,7,8,8~{a}-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, CALCIUM ION, Cytochrome P450-F5053, ...
著者Ma, B.D, Tian, W, Qu, X, Kong, X.D.
登録日2022-12-09
公開日2023-04-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Engineering the Substrate Specificity of a P450 Dimerase Enables the Collective Biosynthesis of Heterodimeric Tryptophan-Containing Diketopiperazines.
Angew.Chem.Int.Ed.Engl., 62, 2023
8HNY
DownloadVisualize
BU of 8hny by Molmil
Crystal structure of cytochrome P450 NasF5053 mutant E73S complexed with 5FCWP
分子名称: (3~{S},8~{a}~{S})-3-[(4-fluoranyl-1~{H}-indol-3-yl)methyl]-2,3,6,7,8,8~{a}-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, Cytochrome P450-F5053, PROTOPORPHYRIN IX CONTAINING FE
著者Ma, B.D, Tian, W, Qu, X, Kong, X.D.
登録日2022-12-09
公開日2023-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Engineering the Substrate Specificity of a P450 Dimerase Enables the Collective Biosynthesis of Heterodimeric Tryptophan-Containing Diketopiperazines.
Angew.Chem.Int.Ed.Engl., 62, 2023
9BCE
DownloadVisualize
BU of 9bce by Molmil
Shewanella oneidensis LysR family regulator SO0839 regulatory domain
分子名称: Transcriptional regulator LysR family
著者Han, S.R, Liang, H.H, Lin, Z.H, Fan, Y.L, Ye, K, Gao, H.G, Tao, Y.J, Jin, M.
登録日2024-04-08
公開日2024-11-20
最終更新日2024-12-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A bacterial transcription activator dedicated to the expression of the enzyme catalyzing the first committed step in fatty acid biosynthesis.
Nucleic Acids Res., 52, 2024

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon