Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6VOC
DownloadVisualize
BU of 6voc by Molmil
icosahedral symmetry reconstruction of brome mosaic virus (RNA 3+4)
分子名称: Capsid protein
著者Beren, C, Cui, Y.X, Chakravarty, A, Yang, X, Rao, A.L.N, Knobler, C.M, Zhou, Z.H, Gelbart, W.M.
登録日2020-01-30
公開日2020-05-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Genome organization and interaction with capsid protein in a multipartite RNA virus.
Proc.Natl.Acad.Sci.USA, 117, 2020
5JMT
DownloadVisualize
BU of 5jmt by Molmil
Crystal structure of Zika virus NS3 helicase
分子名称: NS3 helicase
著者Tian, H, Ji, X, Yang, X, Xie, W, Yang, K, Chen, C, Wu, C, Chi, H, Mu, Z, Wang, Z, Yang, H.
登録日2016-04-29
公開日2016-05-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献The crystal structure of Zika virus helicase: basis for antiviral drug design
Protein Cell, 7, 2016
8VSJ
DownloadVisualize
BU of 8vsj by Molmil
Engineered peptide-specific binder in complex with HLA-DR1/CLIP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Class-II-associated invariant chain peptide, HLA class II histocompatibility antigen DR beta chain, ...
著者Jude, K.M, Yang, X, Du, H, Kassardjian, A, Julien, J.-P, Huang, P, Garcia, K.C.
登録日2024-01-24
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (2.28 Å)
主引用文献Differentiating MHC-II antigens with a single loop
To Be Published
8HPM
DownloadVisualize
BU of 8hpm by Molmil
LpqY-SugABC in state 2
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
8HPN
DownloadVisualize
BU of 8hpn by Molmil
LpqY-SugABC in state 3
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (4.55 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
8HPS
DownloadVisualize
BU of 8hps by Molmil
LpqY-SugABC in state 5
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
8HPL
DownloadVisualize
BU of 8hpl by Molmil
LpqY-SugABC in state 1
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (4.29 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
8HPR
DownloadVisualize
BU of 8hpr by Molmil
LpqY-SugABC in state 4
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
3SLU
DownloadVisualize
BU of 3slu by Molmil
Crystal structure of NMB0315
分子名称: M23 peptidase domain protein, NICKEL (II) ION
著者Shen, Y, Wang, X, Yang, X, Xu, H.
登録日2011-06-26
公開日2012-02-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Crystal structure of outer membrane protein NMB0315 from Neisseria meningitidis.
Plos One, 6, 2011
4ZM6
DownloadVisualize
BU of 4zm6 by Molmil
A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase
分子名称: ACETYL COENZYME *A, N-acetyl-beta-D glucosaminidase, SULFATE ION
著者Qin, Z, Xiao, Y, Yang, X, Jiang, Z, Yang, S, Mesters, J.R.
登録日2015-05-02
公開日2015-12-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain glycoside hydrolase family 3 beta-N-acetylglucosaminidase
Sci Rep, 5, 2015
1NOQ
DownloadVisualize
BU of 1noq by Molmil
e-motif structure
分子名称: 5'-D(*CP*CP*GP*CP*CP*G)-3'
著者Zheng, M, Huang, X, Smith, G.K, Yang, X, Gao, X.
登録日2003-01-16
公開日2003-02-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Genetically unstable CXG repeats are structurally dynamic and have a high propensity for folding. An NMR and UV spectroscopic study.
J.Mol.Biol., 264, 1996
8HNV
DownloadVisualize
BU of 8hnv by Molmil
CryoEM structure of HpaCas9-sgRNA-dsDNA in the presence of AcrIIC4
分子名称: CRISPR-associated endonuclease Cas9, anti-CRISPR protein AcrIIC4, non-target strand, ...
著者Sun, W, Cheng, Z, Wang, J, Yang, X, Wang, Y.
登録日2022-12-08
公開日2023-07-19
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献AcrIIC4 inhibits type II-C Cas9 by preventing R-loop formation.
Proc.Natl.Acad.Sci.USA, 120, 2023
5EAZ
DownloadVisualize
BU of 5eaz by Molmil
crystal form I of YfiB belonging to space groups P21
分子名称: SULFATE ION, YfiB
著者Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
登録日2015-10-17
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
9EZG
DownloadVisualize
BU of 9ezg by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((4-((2-aminoethyl)(ethyl)amino)-3-(4H-1,2,4-triazol-4-yl)phenyl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
分子名称: 1,2-ETHANEDIOL, 5-[[4-[2-azanylethyl(ethyl)amino]-3-(1,2,4-triazol-4-yl)phenyl]amino]-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile, Casein kinase II subunit alpha, ...
著者Kraemer, A, Ong, H.W, Yang, X, Brown, J.W, Chang, E, Willson, T, Knapp, S, Structural Genomics Consortium (SGC)
登録日2024-04-12
公開日2024-07-31
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献More than an Amide Bioisostere: Discovery of 1,2,4-Triazole-containing Pyrazolo[1,5- a ]pyrimidine Host CSNK2 Inhibitors for Combatting beta-Coronavirus Replication.
J.Med.Chem., 67, 2024
5EB0
DownloadVisualize
BU of 5eb0 by Molmil
crystal form II of YfiB belonging to P41
分子名称: SULFATE ION, YfiB
著者Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
登録日2015-10-17
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
9FYF
DownloadVisualize
BU of 9fyf by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with TR06772818
分子名称: Casein kinase II subunit alpha, SULFATE ION, ~{N}-[5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-4-fluoranyl-2-[(3~{S})-3-(methylamino)piperidin-1-yl]phenyl]propanamide
著者Kraemer, A, Ong, H.W, Yang, X, Brown, J.W, Chang, E, Willson, T, Knapp, S, Structural Genomics Consortium (SGC)
登録日2024-07-03
公開日2024-09-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with TR06772818
To Be Published
5EB2
DownloadVisualize
BU of 5eb2 by Molmil
Trp-bound YfiR
分子名称: SULFATE ION, TRYPTOPHAN, YfiR
著者Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
登録日2015-10-17
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.709 Å)
主引用文献Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
5EB1
DownloadVisualize
BU of 5eb1 by Molmil
the YfiB-YfiR complex
分子名称: SULFATE ION, YfiB, YfiR
著者Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
登録日2015-10-17
公開日2016-05-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
5EB3
DownloadVisualize
BU of 5eb3 by Molmil
VB6-bound protein
分子名称: 4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol, SULFATE ION, YfiR
著者Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
登録日2015-10-17
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
4Q2J
DownloadVisualize
BU of 4q2j by Molmil
A novel structure-based mechanism for DNA-binding of SATB1
分子名称: DNA-binding protein SATB1
著者Wang, Z, Long, J, Yang, X, Shen, Y.
登録日2014-04-08
公開日2015-03-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Crystal structure of the ubiquitin-like domain-CUT repeat-like tandem of special AT-rich sequence binding protein 1 (SATB1) reveals a coordinating DNA-binding mechanism.
J.Biol.Chem., 289, 2014
1U8X
DownloadVisualize
BU of 1u8x by Molmil
CRYSTAL STRUCTURE OF GLVA FROM BACILLUS SUBTILIS, A METAL-REQUIRING, NAD-DEPENDENT 6-PHOSPHO-ALPHA-GLUCOSIDASE
分子名称: 6-O-phosphono-alpha-D-glucopyranose, MANGANESE (II) ION, Maltose-6'-phosphate glucosidase, ...
著者Rajan, S.S, Yang, X, Collart, F, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2004-08-09
公開日2004-08-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Novel Catalytic Mechanism of Glycoside Hydrolysis Based on the Structure of an NAD(+)/Mn(2+)-Dependent Phospho-alpha-Glucosidase from Bacillus subtilis.
STRUCTURE, 12, 2004
5B6G
DownloadVisualize
BU of 5b6g by Molmil
Protein-protein interaction
分子名称: Adenomatous polyposis coli protein, GLYCEROL, PHQ-ALA-GLY-GLU-ALA-XYC-TYR-GLU, ...
著者Zhao, Y, Jiang, H, Yang, X, Jiang, F, Song, K, Zhang, J.
登録日2016-05-27
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Peptidomimetic inhibitors of APC-Asef interaction block colorectal cancer migration.
Nat. Chem. Biol., 13, 2017
2CLS
DownloadVisualize
BU of 2cls by Molmil
The crystal structure of the human RND1 GTPase in the active GTP bound state
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RHO-RELATED GTP-BINDING PROTEIN RHO6
著者Pike, A.C.W, Yang, X, Colebrook, S, Gileadi, O, Sobott, F, Bray, J, Wen Hwa, L, Marsden, B, Zhao, Y, Schoch, G, Elkins, J, Debreczeni, J.E, Turnbull, A.P, von Delft, F, Arrowsmith, C, Edwards, A, Weigelt, J, Sundstrom, M, Doyle, D.
登録日2006-04-28
公開日2006-05-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献The Crystal Structure of the Human Rnd1 Gtpase in the Active GTP Bound State
To be Published
2FCF
DownloadVisualize
BU of 2fcf by Molmil
The crystal structure of the 7th PDZ domain of MPDZ (MUPP-1)
分子名称: Multiple PDZ domain protein
著者Papagrigoriou, E, Berridge, G, Johansson, C, Colebrook, S, Salah, E, Burgess, N, Smee, C, Savitsky, P, Bray, J, Schoch, G, Phillips, C, Gileadi, C, Soundarajan, M, Yang, X, Elkins, J.M, Gorrec, F, Turnbull, A, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
登録日2005-12-12
公開日2006-01-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
Protein Sci., 16, 2007
2FNE
DownloadVisualize
BU of 2fne by Molmil
The crystal structure of the 13th PDZ domain of MPDZ
分子名称: Multiple PDZ domain protein
著者Papagrigoriou, E, Berridge, G, Johansson, C, Colebrook, S, Salah, E, Burgess, N, Smee, C, Savitsky, P, Bray, J, Schoch, G, Phillips, C, Gileadi, C, Soundarajan, M, Yang, X, Elkins, J.M, Gorrec, F, Turnbull, A, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
登録日2006-01-11
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
Protein Sci., 16, 2007

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon