Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2FAT
DownloadVisualize
BU of 2fat by Molmil
An anti-urokinase plasminogen activator receptor (UPAR) antibody: Crystal structure and binding epitope
分子名称: FAB ATN-615, heavy chain, light chain
著者Li, Y, Parry, G, Shi, X, Chen, L, Callahan, J.A, Mazar, A.P, Huang, M.
登録日2005-12-07
公開日2006-11-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献An anti-urokinase plasminogen activator receptor (uPAR) antibody: crystal structure and binding epitope
J.Mol.Biol., 365, 2007
2FHT
DownloadVisualize
BU of 2fht by Molmil
Crystal Structure of Viral Macrophage Inflammatory Protein-II
分子名称: Viral macrophage inflammatory protein-II
著者Li, Y, Liu, D, Cao, R, Kumar, S, Dong, C.Z, wilson, S.R, Gao, Y.G, Huang, Z.
登録日2005-12-27
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of chemically synthesized vMIP-II.
Proteins, 67, 2007
2HQ4
DownloadVisualize
BU of 2hq4 by Molmil
Crystal Structure of ORF 1580 a hypothetical protein from Pyrococcus horikoshii
分子名称: Hypothetical protein PH1570
著者Li, Y, Marshall, M, Chang, J, Zhao, M, Zhang, M, Xu, H, Liu, Z.J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2006-07-18
公開日2006-09-19
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal Structure of ORF 1580 a hypothetical protein from Pyrococcus horikoshii
To be Published
2FJ2
DownloadVisualize
BU of 2fj2 by Molmil
Crystal Structure of Viral Macrophage Inflammatory Protein-II
分子名称: Viral macrophage inflammatory protein-II
著者Li, Y, Liu, D, Cao, R, Kumar, S, Dong, C.Z, wilson, S.R, Gao, Y.G, Huang, Z.
登録日2005-12-30
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of chemically synthesized vMIP-II.
Proteins, 67, 2007
8JYY
DownloadVisualize
BU of 8jyy by Molmil
Crystal structure of the gasdermin-like protein RCD-1-2 from Neurospora crassa
分子名称: RCD-1-2
著者Li, Y, Hou, Y.J, Ding, J.
登録日2023-07-04
公開日2024-05-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 384, 2024
8JYX
DownloadVisualize
BU of 8jyx by Molmil
Crystal structure of the gasdermin-like protein RCD-1-1 from Neurospora crassa
分子名称: Maltodextrin-binding protein,Gasdermin-like protein rcd-1-1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Li, Y, Hou, Y.J, Ding, J.
登録日2023-07-04
公開日2024-05-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 384, 2024
8GJY
DownloadVisualize
BU of 8gjy by Molmil
Structure of a cGAS-like receptor Sp-cGLR1 from S. pistillata
分子名称: cGAS-like receptor 1
著者Li, Y, Toyoda, H, Slavik, K.M, Morehouse, B.R, Kranzusch, P.J.
登録日2023-03-16
公開日2023-07-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GJW
DownloadVisualize
BU of 8gjw by Molmil
Structure of a cGAS-like receptor Cv-cGLR1 from C. virginica
分子名称: SULFATE ION, cGAS-like receptor 1
著者Li, Y, Morehouse, B.R, Slavik, K.M, Liu, J, Toyoda, H, Kranzusch, P.J.
登録日2023-03-16
公開日2023-07-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GJZ
DownloadVisualize
BU of 8gjz by Molmil
Structure of a STING receptor from S. pistillata Sp-STING1 bound to 2'3'-cUA
分子名称: 2'3'-cUA, Stimulator of interferon genes protein
著者Li, Y, Toyoda, H, Slavik, K.M, Morehouse, B.R, Kranzusch, P.J.
登録日2023-03-16
公開日2023-07-05
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
7WN8
DownloadVisualize
BU of 7wn8 by Molmil
Crystal structure of antibody (BC31M5) binds to CD47
分子名称: BC31M5 Fab Heavy chain, BC31M5 Fab Light chain, Leukocyte surface antigen CD47, ...
著者Li, Y, Wang, W, Sui, J, Zhang, S.
登録日2022-01-17
公開日2023-01-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A pH-dependent anti-CD47 antibody that selectively targets solid tumors and improves therapeutic efficacy and safety.
J Hematol Oncol, 16, 2023
5YDM
DownloadVisualize
BU of 5ydm by Molmil
The crystal structure of the Acyl Transferase domain of SpnD complex with benzylmalonyl
分子名称: (2R)-2-methanoyl-3-phenyl-propanoic acid, PKS
著者Li, Y, Qu, X.D, Zhou, J.H.
登録日2017-09-13
公開日2018-05-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis of a Broadly Selective Acyltransferase from the Polyketide Synthase of Splenocin.
Angew. Chem. Int. Ed. Engl., 57, 2018
5YDL
DownloadVisualize
BU of 5ydl by Molmil
The crystal structure of the Acyl Transferase domain of SpnD complex with 2-(pent-4-yn-1-yl)malonyl
分子名称: (2R)-2-methanoylhept-6-ynoic acid, PKS
著者Li, Y, Qu, X.D, Zhou, J.H.
登録日2017-09-13
公開日2018-05-23
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Structural Basis of a Broadly Selective Acyltransferase from the Polyketide Synthase of Splenocin.
Angew. Chem. Int. Ed. Engl., 57, 2018
5YDA
DownloadVisualize
BU of 5yda by Molmil
The crystal structure of the Acyl Transferase domain of SpnD
分子名称: PKS
著者Li, Y, Qu, X.D, Zhou, J.H.
登録日2017-09-12
公開日2018-05-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.353 Å)
主引用文献Structural Basis of a Broadly Selective Acyltransferase from the Polyketide Synthase of Splenocin.
Angew. Chem. Int. Ed. Engl., 57, 2018
7E7C
DownloadVisualize
BU of 7e7c by Molmil
Crystal structure of ENL YEATS domain T1 mutant in complex with histone H3 acetylation at K27
分子名称: 1,2-ETHANEDIOL, Histone H3K27ac(24-27) peptide, IODIDE ION, ...
著者Li, Y, Li, H.
登録日2021-02-25
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal structure of ENL YEATS domain T1 mutant in complex with histone H3 acetylation at K27
To Be Published
7E7A
DownloadVisualize
BU of 7e7a by Molmil
Crystal structure of apo ENL YEATS domain T3 mutant
分子名称: Protein ENL
著者Li, Y, Li, H.
登録日2021-02-25
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Crystal structure of ENL YEATS domain T1 mutant in complex with histone H3 acetylation at K27
To Be Published
6N1H
DownloadVisualize
BU of 6n1h by Molmil
Cryo-EM structure of ASC-CARD filament
分子名称: Apoptosis-associated speck-like protein containing a CARD
著者Li, Y, Fu, T, Wu, H.
登録日2018-11-08
公開日2018-12-05
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Cryo-EM structures of ASC and NLRC4 CARD filaments reveal a unified mechanism of nucleation and activation of caspase-1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7YTE
DownloadVisualize
BU of 7yte by Molmil
crystal structure of human FcmR-D1 bound to IgM C4-domain
分子名称: Fas apoptotic inhibitory molecule 3, Ig mu chain C region secreted form
著者Li, Y, Shen, H, Xiao, J.
登録日2022-08-14
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Immunoglobulin M perception by Fc mu R.
Nature, 615, 2023
7YTD
DownloadVisualize
BU of 7ytd by Molmil
Cryo-EM structure of four human FcmR bound to IgM-Fc/J
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, Immunoglobulin J chain, ...
著者Li, Y, Shen, H, Xiao, J.
登録日2022-08-14
公開日2023-02-01
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献Immunoglobulin M perception by Fc mu R.
Nature, 615, 2023
7YTC
DownloadVisualize
BU of 7ytc by Molmil
Cryo-EM structure of human FcmR bound to IgM-Fc/J
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, Immunoglobulin J chain, ...
著者Li, Y, Shen, H, Xiao, J.
登録日2022-08-14
公開日2023-02-01
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Immunoglobulin M perception by Fc mu R.
Nature, 615, 2023
7YSG
DownloadVisualize
BU of 7ysg by Molmil
Cryo-EM structure of human FcmR bound to sIgM
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, ...
著者Li, Y, Shen, H, Xiao, J.
登録日2022-08-12
公開日2023-02-01
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Immunoglobulin M perception by Fc mu R.
Nature, 615, 2023
6N1I
DownloadVisualize
BU of 6n1i by Molmil
Cryo-EM structure of NLRC4-CARD filament
分子名称: NLR family CARD domain-containing protein 4
著者Li, Y, Fu, T, Wu, H.
登録日2018-11-08
公開日2018-12-05
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Cryo-EM structures of ASC and NLRC4 CARD filaments reveal a unified mechanism of nucleation and activation of caspase-1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7CWW
DownloadVisualize
BU of 7cww by Molmil
Crystal structure of TsrL
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36-dodecaoxaoctatriacontane-1,38-diol, TsrE
著者Li, Y, Pan, L.F.
登録日2020-08-31
公開日2021-09-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献crystal structure of TsrL
To Be Published
7F68
DownloadVisualize
BU of 7f68 by Molmil
Crystal structure of N-ras S89D
分子名称: GTPase NRas, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Li, Y, Sun, Q.
登録日2021-06-24
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Crystal structure of N-ras S89D
To Be Published
2IPA
DownloadVisualize
BU of 2ipa by Molmil
solution structure of Trx-ArsC complex
分子名称: Protein arsC, Thioredoxin
著者Jin, C, Hu, Y, Li, Y, Zhang, X.
登録日2006-10-12
公開日2007-02-13
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Conformational fluctuations coupled to the thiol-disulfide transfer between thioredoxin and arsenate reductase in Bacillus subtilis.
J.Biol.Chem., 282, 2007
6ZD7
DownloadVisualize
BU of 6zd7 by Molmil
Crystal structure of YTHDC1 T379V mutant complex with m6A
分子名称: N-methyladenosine, SULFATE ION, YTH domain containing 1
著者Bedi, R.K, Li, Y, Caflisch, A.
登録日2020-06-13
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1.
J Chem Theory Comput, 17, 2021

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon