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1RRX
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BU of 1rrx by Molmil
Crystallographic Evidence for Isomeric Chromophores in 3-Fluorotyrosyl-Green Fluorescent Protein
分子名称: SIGF1-GFP fusion protein
著者Bae, J.H, Paramita Pal, P, Moroder, L, Huber, R, Budisa, N.
登録日2003-12-09
公開日2004-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic Evidence for Isomeric Chromophores in 3-Fluorotyrosyl-Green Fluorescent Protein.
Chembiochem, 5, 2004
1XQ4
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BU of 1xq4 by Molmil
Crystal Structure of the Putative ApaA Protein from Bordetella pertussis, Northeast Structural Genomics Target BeR40
分子名称: PHOSPHATE ION, Protein apaG
著者Forouhar, F, Yong, W, Vorobiev, S.M, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2004-10-11
公開日2004-11-09
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of the Putative ApaA Protein from Bordetella pertussis, Northeast Structural Genomics Target BeR40
To be Published
1XQE
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BU of 1xqe by Molmil
The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.
分子名称: ACETATE ION, Probable ammonium transporter, SULFATE ION
著者Zheng, L, Kostrewa, D, Berneche, S, Winkler, F.K, Li, X.-D.
登録日2004-10-12
公開日2004-10-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli
Proc.Natl.Acad.Sci.USA, 101, 2004
1RSW
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BU of 1rsw by Molmil
12-mer from site II calbindin D9K (DKNGDGEVSFEE) coordination Pb(II)
分子名称: Vitamin D-dependent calcium-binding protein, intestinal
著者Ferrari, R, Mendoza, G, James, T, Tonelli, M, Basus, V, Gasque, L.
登録日2003-12-10
公開日2005-07-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Coordination Compounds derived from a dodecapeptide and Pb2+, Cd2+ and Zn2+. Modeling the site II from the Calbindin D9K
To be published
6C92
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BU of 6c92 by Molmil
The structure of MppP soaked with the product 2-ketoarginine
分子名称: (4S)-5-carbamimidamido-4-hydroxy-2-oxopentanoic acid, (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-arginine, PLP-Dependent L-Arginine Hydroxylase MppP
著者Han, L, Silvaggi, N.R.
登録日2018-01-25
公開日2018-09-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.834 Å)
主引用文献Streptomyces wadayamensis MppP is a PLP-Dependent Oxidase, Not an Oxygenase.
Biochemistry, 57, 2018
8PMD
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BU of 8pmd by Molmil
Nucleotide-bound BSEP in nanodiscs
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Bile salt export pump, MAGNESIUM ION
著者Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
登録日2023-06-28
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
6C9B
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BU of 6c9b by Molmil
The structure of MppP soaked with the products 4HKA and 2KA
分子名称: (4S)-5-carbamimidamido-4-hydroxy-2-oxopentanoic acid, CHLORIDE ION, PLP-Dependent L-Arginine Hydroxylase MppP
著者Han, L, Silvaggi, N.R.
登録日2018-01-26
公開日2018-04-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.689 Å)
主引用文献Streptomyces wadayamensis MppP is a PLP-Dependent Oxidase, Not an Oxygenase.
Biochemistry, 57, 2018
1XR1
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BU of 1xr1 by Molmil
Crystal structure of hPim-1 kinase in complex with AMP-PNP at 2.1 A Resolution
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Proto-oncogene serine/threonine-protein kinase Pim-1
著者Qian, K.C, Wang, L, Hickey, E.R, Studts, J, Barringer, K, Peng, C, Kronkaitis, A, Li, J, White, A, Mische, S, Farmer, B.
登録日2004-10-13
公開日2004-11-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of Constitutive Activity and a Unique Nucleotide Binding Mode of Human Pim-1 Kinase.
J.Biol.Chem., 280, 2005
8PMJ
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BU of 8pmj by Molmil
Vanadate-trapped BSEP in nanodiscs
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Bile salt export pump, ...
著者Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
登録日2023-06-28
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
2NZ2
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BU of 2nz2 by Molmil
Crystal structure of human argininosuccinate synthase in complex with aspartate and citrulline
分子名称: ASPARTIC ACID, Argininosuccinate synthase, CITRULLINE, ...
著者Karlberg, T, Uppenberg, J, Arrowsmith, C, Berglund, H, Busam, R.D, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Hogbom, M, Johansson, I, Kotenyova, T, Magnusdottir, A, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Wallden, K, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
登録日2006-11-22
公開日2006-12-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of human argininosuccinate synthetase.
Acta Crystallogr.,Sect.D, 64, 2008
6CAE
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BU of 6cae by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Pantel, L, Florin, T, Dobosz-Bartoszek, M, Racine, E, Sarciaux, M, Serri, M, Houard, J, Campagne, J.M, Marcia de Figueiredo, R, Midrier, C, Gaudriault, S, Givaudan, A, Lanois, A, Forst, S, Aumelas, A, Cotteaux-Lautard, C, Bolla, J.M, Vingsbo Lundberg, C, Huseby, D, Hughes, D, Villain-Guillot, P, Mankin, A.S, Polikanov, Y.S, Gualtieri, M.
登録日2018-01-30
公開日2018-04-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Odilorhabdins, Antibacterial Agents that Cause Miscoding by Binding at a New Ribosomal Site.
Mol. Cell, 70, 2018
1RW2
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BU of 1rw2 by Molmil
Three-dimensional structure of Ku80 CTD
分子名称: ATP-dependent DNA helicase II, 80 kDa subunit
著者Zhang, Z, Hu, W, Cano, L, Lee, T.D, Chen, D.J, Chen, Y.
登録日2003-12-15
公開日2003-12-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the C-terminal domain of Ku80 suggests important sites for protein-protein interactions.
STRUCTURE, 12, 2004
1XTO
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BU of 1xto by Molmil
Crystal Structure of the Coenzyme PQQ Synthesis Protein (PqqB) from Pseudomonas putida, Northeast Structural Genomics Target PpR6
分子名称: Coenzyme PQQ synthesis protein B, ZINC ION
著者Forouhar, F, Chen, Y, Kuzin, A, Vorobiev, S.M, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2004-10-22
公開日2004-11-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of the Coenzyme PQQ Synthesis Protein (PqqB) from Pseudomonas putida, Northeast Structural Genomics Target PpR6
To be Published
8PN8
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BU of 8pn8 by Molmil
Engineered glycolyl-CoA carboxylase (L100N variant) with bound CoA
分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, COENZYME A, Propionyl-CoA carboxylase alpha subunit, ...
著者Zarzycki, J, Marchal, D.G, Schulz, L, Prinz, S, Erb, T.J.
登録日2023-06-30
公開日2023-11-29
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.31 Å)
主引用文献Machine Learning-Supported Enzyme Engineering toward Improved CO 2 -Fixation of Glycolyl-CoA Carboxylase.
Acs Synth Biol, 12, 2023
8PDP
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BU of 8pdp by Molmil
10-mer ring of HMPV N-RNA bound to the C-terminal region of P
分子名称: Nucleoprotein, Phosphoprotein, RNA
著者Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M.
登録日2023-06-12
公開日2023-12-06
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus.
Nat Commun, 14, 2023
1REO
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BU of 1reo by Molmil
L-amino acid oxidase from Agkistrodon halys pallas
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AHPLAAO, CITRIC ACID, ...
著者Zhang, H, Teng, M, Niu, L, Wang, Y, Wang, Y, Liu, Q, Huang, Q, Hao, Q, Dong, Y, Liu, P.
登録日2003-11-07
公開日2004-05-04
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Purification, partial characterization, crystallization and structural determination of AHP-LAAO, a novel L-amino-acid oxidase with cell apoptosis-inducing activity from Agkistrodon halys pallas venom.
Acta Crystallogr.,Sect.D, 60, 2004
6C5W
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BU of 6c5w by Molmil
Crystal structure of the mitochondrial calcium uniporter
分子名称: CALCIUM ION, calcium uniporter, nanobody
著者Fan, C, Fan, M, Fastman, N, Zhang, J, Feng, L.
登録日2018-01-17
公開日2018-07-11
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (3.10010242 Å)
主引用文献X-ray and cryo-EM structures of the mitochondrial calcium uniporter.
Nature, 559, 2018
1R4A
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BU of 1r4a by Molmil
Crystal Structure of GTP-bound ADP-ribosylation Factor Like Protein 1 (Arl1) and GRIP Domain of Golgin245 COMPLEX
分子名称: ADP-ribosylation factor-like protein 1, Golgi autoantigen, golgin subfamily A member 4, ...
著者Wu, M, Lu, L, Hong, W, Song, H.
登録日2003-10-04
公開日2004-01-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for recruitment of GRIP domain golgin-245 by small GTPase Arl1.
Nat.Struct.Mol.Biol., 11, 2004
1X8E
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BU of 1x8e by Molmil
Crystal structure of Pyrococcus furiosus phosphoglucose isomerase free enzyme
分子名称: Glucose-6-phosphate isomerase
著者Berrisford, J.M, Akerboom, J, Brouns, S, Sedelnikova, S.E, Turnbull, A.P, van der Oost, J, Salmon, L, Hardre, R, Murray, I.A, Blackburn, G.M, Rice, D.W, Baker, P.J.
登録日2004-08-18
公開日2004-10-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis.
J.Mol.Biol., 343, 2004
8PDM
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BU of 8pdm by Molmil
11-mer ring of human metapneumovirus (HMPV) N-RNA
分子名称: Nucleoprotein, RNA
著者Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M.
登録日2023-06-12
公開日2023-12-06
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus.
Nat Commun, 14, 2023
5DJ5
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BU of 5dj5 by Molmil
Crystal structure of rice DWARF14 in complex with synthetic strigolactone GR24
分子名称: (3E,3aR,8bS)-3-({[(2R)-4-methyl-5-oxo-2,5-dihydrofuran-2-yl]oxy}methylidene)-3,3a,4,8b-tetrahydro-2H-indeno[1,2-b]furan-2-one, Probable strigolactone esterase D14
著者Zhou, X.E, Zhao, L.-H, Yi, W, Wu, Z.-S, Liu, Y, Kang, Y, Hou, L, de Waal, P.W, Li, S, Jiang, Y, Melcher, K, Xu, H.E.
登録日2015-09-01
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Destabilization of strigolactone receptor DWARF14 by binding of ligand and E3-ligase signaling effector DWARF3.
Cell Res., 25, 2015
1X7N
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BU of 1x7n by Molmil
The crystal structure of Pyrococcus furiosus phosphoglucose isomerase with bound 5-phospho-D-arabinonate and Manganese
分子名称: 5-PHOSPHOARABINONIC ACID, Glucose-6-phosphate isomerase, MANGANESE (II) ION
著者Berrisford, J.M, Akerboom, J, Brouns, S, Sedelnikova, S.E, Turnbull, A.P, van der Oost, J, Salmon, L, Hardre, R, Murray, I.A, Blackburn, G.M, Rice, D.W, Baker, P.J.
登録日2004-08-16
公開日2004-10-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis.
J.Mol.Biol., 343, 2004
8P1N
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Structure of hantaan orthohantavirus (HTNV) polymerase bound to 5'vRNA
分子名称: RNA (5'-R(P*AP*GP*UP*AP*G)-3'), RNA-directed RNA polymerase L
著者Keown, J.R, Carrique, L, Grimes, J.M.
登録日2023-05-12
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Structure of hantaan orthohantavirus (HTNV) polymerase bound to 5'vRNA
To Be Published
8OPF
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BU of 8opf by Molmil
Virus-like Particle based on PVY coat protein with dC60 deletion with RNA-free helical architecture
分子名称: Genome polyprotein (Fragment)
著者Kavcic, L, Kezar, A, Podobnik, M.
登録日2023-04-07
公開日2024-01-24
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献From structural polymorphism to structural metamorphosis of the coat protein of flexuous filamentous potato virus Y.
Commun Chem, 7, 2024
8OPK
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Local refinement of cubic assembly from truncated PVY coat protein with K176C mutation
分子名称: Genome polyprotein
著者Kavcic, L, Kezar, A, Podobnik, M.
登録日2023-04-07
公開日2024-01-24
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献From structural polymorphism to structural metamorphosis of the coat protein of flexuous filamentous potato virus Y.
Commun Chem, 7, 2024

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