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8CX9
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BU of 8cx9 by Molmil
Structure of the SARS-COV2 PLpro (C111S) in complex with a dimeric Ubv that inhibits activity by an unusual allosteric mechanism
分子名称: BROMIDE ION, CHLORIDE ION, Papain-like protease nsp3, ...
著者Singer, A.U, Slater, C.L, Patel, A, Russel, R, Mark, B.L, Sidhu, S.S.
登録日2022-05-20
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Ubiquitin variants potently inhibit SARS-CoV-2 PLpro and viral replication via a novel site distal to the protease active site.
Plos Pathog., 18, 2022
6Q0N
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BU of 6q0n by Molmil
Structure of the Erbin PDB domain in complex with a high-affinity peptide
分子名称: Erbin, peptide
著者Singer, A.U, Teyra, J, Ernst, A, Sicheri, F, Sidhu, S.S.
登録日2019-08-02
公開日2019-11-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Comprehensive analysis of all evolutionary paths between two divergent PDZ domain specificities.
Protein Sci., 29, 2020
6Q0U
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BU of 6q0u by Molmil
Structure of the Erbin PDZ variant E-6a with a high-affinity C-terminal peptide
分子名称: 1,2-ETHANEDIOL, Erbin, peptide
著者Singer, A.U, Teyra, J, Ernst, A, Sicheri, F, Sidhu, S.S.
登録日2019-08-02
公開日2019-11-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Comprehensive analysis of all evolutionary paths between two divergent PDZ domain specificities.
Protein Sci., 29, 2020
6Q0M
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BU of 6q0m by Molmil
Structure of Erbin PDZ derivative E-14 with a high-affinity peptide
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Singer, A.U, Teyra, J, Ernst, A, Sicheri, F, Sidhu, S.S.
登録日2019-08-02
公開日2019-11-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Comprehensive analysis of all evolutionary paths between two divergent PDZ domain specificities.
Protein Sci., 29, 2020
3M16
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BU of 3m16 by Molmil
Structure of a Transaldolase from Oleispira antarctica
分子名称: Transaldolase
著者Singer, A.U, Kagan, O, Zhang, R, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-03-04
公開日2010-06-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Nat Commun, 4, 2013
2QH1
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BU of 2qh1 by Molmil
Structure of TA289, a CBS-rubredoxin-like protein, in its Fe+2-bound state
分子名称: FE (II) ION, Hypothetical protein Ta0289
著者Singer, A.U, Proudfoot, M, Brown, G, Xu, L, Savchenko, A, Yakunin, A.F, Midwest Center for Structural Genomics (MCSG)
登録日2007-06-29
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Biochemical and structural characterization of a novel family of cystathionine beta-synthase domain proteins fused to a Zn ribbon-like domain.
J.Mol.Biol., 375, 2008
2PYU
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BU of 2pyu by Molmil
Structure of the E. coli inosine triphosphate pyrophosphatase RgdB in complex with IMP
分子名称: 1,2-ETHANEDIOL, INOSINIC ACID, Inosine Triphosphate Pyrophosphatase RdgB
著者Singer, A.U, Proudfoot, M, Skarina, T, Savchenko, A, Yakunin, A.F.
登録日2007-05-16
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli.
J.Mol.Biol., 374, 2007
2Q16
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BU of 2q16 by Molmil
Structure of the E. coli inosine triphosphate pyrophosphatase RgdB in complex with ITP
分子名称: CALCIUM ION, HAM1 protein homolog, INOSINE 5'-TRIPHOSPHATE, ...
著者Singer, A.U, Lam, R, Proudfoot, M, Skarina, T, Savchenko, A, Yakunin, A.F.
登録日2007-05-23
公開日2008-02-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli.
J.Mol.Biol., 374, 2007
3QVM
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BU of 3qvm by Molmil
The structure of olei00960, a hydrolase from Oleispira antarctica
分子名称: CALCIUM ION, CHLORIDE ION, Olei00960, ...
著者Singer, A.U, Kagan, O, Kim, Y, Edwards, A.M, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2011-02-25
公開日2011-04-13
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Nat Commun, 4, 2013
3OI7
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BU of 3oi7 by Molmil
Structure of the structure of the H13A mutant of Ykr043C in complex with sedoheptulose-1,7-bisphosphate
分子名称: 1,2-ETHANEDIOL, 1,7-di-O-phosphono-beta-D-altro-hept-2-ulofuranose, GLYCEROL, ...
著者Singer, A.U, Xu, X, Dong, A, Cui, H, Clasquin, M.F, Caudy, A.A, Edwards, A.M, Savchenko, A, Joachimiak, A, Yakunin, A.F, Midwest Center for Structural Genomics (MCSG)
登録日2010-08-18
公開日2010-11-17
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Riboneogenesis in yeast.
Cell(Cambridge,Mass.), 145, 2011
3BRM
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BU of 3brm by Molmil
Crystal structure of the covalent complex between the Bacillus subtilis glutaminase YbgJ and 5-oxo-L-norleucine formed by reaction of the protein with 6-diazo-5-oxo-L-norleucine
分子名称: 5-OXO-L-NORLEUCINE, Glutaminase 1
著者Singer, A.U, Kim, Y, Dementieva, I, Vinokour, E, Joachimiak, A, Savchenko, A, Yakunin, A.
登録日2007-12-21
公開日2008-05-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis.
Biochemistry, 47, 2008
3DRW
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BU of 3drw by Molmil
Crystal Structure of a Phosphofructokinase from Pyrococcus horikoshii OT3 with AMP
分子名称: ADENOSINE MONOPHOSPHATE, ADP-specific phosphofructokinase, SODIUM ION
著者Singer, A.U, Skarina, T, Kochinyan, S, Brown, G, Cuff, M.E, Edwards, A.M, Joachimiak, A, Savchenko, A, Yakunin, A.F, Jia, Z, Midwest Center for Structural Genomics (MCSG)
登録日2008-07-11
公開日2008-12-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献ADP-dependent 6-phosphofructokinase from Pyrococcus horikoshii OT3: structure determination and biochemical characterization of PH1645.
J.Biol.Chem., 284, 2009
3G1Z
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BU of 3g1z by Molmil
Structure of IDP01693/yjeA, a potential t-RNA synthetase from Salmonella typhimurium
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, PHOSPHATE ION, ...
著者Singer, A.U, Evdokimova, E, Kudritska, M, Cuff, M.E, Edwards, A.M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-01-30
公開日2009-03-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献PoxA, yjeK, and elongation factor P coordinately modulate virulence and drug resistance in Salmonella enterica.
Mol.Cell, 39, 2010
3I4Q
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BU of 3i4q by Molmil
Structure of a putative inorganic pyrophosphatase from the oil-degrading bacterium Oleispira antarctica
分子名称: APC40078, SODIUM ION
著者Singer, A.U, Evdokimova, E, Kagan, O, Edwards, A.M, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-07-02
公開日2009-07-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Nat Commun, 4, 2013
2KKX
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BU of 2kkx by Molmil
Solution Structure of C-terminal domain of reduced NleG2-3 (residues 90-191) from Pathogenic E. coli O157:H7. Northeast Structural Genomics Consortium and Midwest Center for Structural Genomics target ET109A
分子名称: Uncharacterized protein ECs2156
著者Wu, B, Yee, A, Fares, C, Lemak, A, Semest, A, Claude, M, Singer, A, Edwards, A, Savchenko, A, Montelione, G.T, Joachimiak, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP), Midwest Center for Structural Genomics (MCSG)
登録日2009-06-29
公開日2009-08-25
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献NleG Type 3 effectors from enterohaemorrhagic Escherichia coli are U-Box E3 ubiquitin ligases.
Plos Pathog., 6, 2010
2KKY
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BU of 2kky by Molmil
Solution Structure of C-terminal domain of oxidized NleG2-3 (residue 90-191) from Pathogenic E. coli O157:H7. Northeast Structural Genomics Consortium and Midwest Center for Structural Genomics target ET109A
分子名称: Uncharacterized protein ECs2156
著者Wu, B, Yee, A, Fares, C, Lemak, A, Semest, A, Claude, M, Singer, A, Edwards, A, Savchenko, A, Montelione, G.T, Joachimiak, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Midwest Center for Structural Genomics (MCSG), Ontario Centre for Structural Proteomics (OCSP)
登録日2009-06-29
公開日2009-08-25
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献NleG Type 3 effectors from enterohaemorrhagic Escherichia coli are U-Box E3 ubiquitin ligases.
Plos Pathog., 6, 2010
2AZS
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BU of 2azs by Molmil
NMR structure of the N-terminal SH3 domain of Drk (calculated without NOE restraints)
分子名称: SH2-SH3 adapter protein drk
著者Bezsonova, I, Singer, A.U, Choy, W.-Y, Tollinger, M, Forman-Kay, J.D.
登録日2005-09-12
公開日2005-12-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Comparison of the Unstable drkN SH3 Domain and a Stable Mutant
Biochemistry, 44, 2005
2AZV
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BU of 2azv by Molmil
Solution structure of the T22G mutant of N-terminal SH3 domain of DRK (calculated without NOEs)
分子名称: SH2-SH3 adapter protein drk
著者Bezsonova, I, Singer, A.U, Choy, W.-Y, Tollinger, M, Forman-Kay, J.D.
登録日2005-09-12
公開日2005-12-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Comparison of the Unstable drkN SH3 Domain and a Stable Mutant
Biochemistry, 44, 2005
1TCE
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BU of 1tce by Molmil
SOLUTION NMR STRUCTURE OF THE SHC SH2 DOMAIN COMPLEXED WITH A TYROSINE-PHOSPHORYLATED PEPTIDE FROM THE T-CELL RECEPTOR, MINIMIZED AVERAGE STRUCTURE
分子名称: PHOSPHOPEPTIDE OF THE ZETA CHAIN OF T CELL RECEPTOR, SHC
著者Zhou, M.-M, Meadows, R.P, Logan, T.M, Yoon, H.S, Wade, W.R, Ravichandran, K.S, Burakoff, S.J, Feisk, S.W.
登録日1996-03-27
公開日1997-05-15
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of the Shc SH2 domain complexed with a tyrosine-phosphorylated peptide from the T-cell receptor.
Proc.Natl.Acad.Sci.USA, 92, 1995
3S8Y
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BU of 3s8y by Molmil
Bromide soaked structure of an esterase from the oil-degrading bacterium Oleispira antarctica
分子名称: BROMIDE ION, Esterase APC40077
著者Petit, P, Dong, A, Kagan, O, Savchenko, A, Yakunin, A.F.
登録日2011-05-31
公開日2011-06-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica.
Biochem.J., 445, 2012
3Q3C
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BU of 3q3c by Molmil
Crystal structure of a serine dehydrogenase from Pseudomonas aeruginosa pao1 in complex with NAD
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Probable 3-hydroxyisobutyrate dehydrogenase
著者Tan, K, Singer, A.U, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Yakunin, A.F, Midwest Center for Structural Genomics (MCSG)
登録日2010-12-21
公開日2011-02-23
最終更新日2012-02-01
実験手法X-RAY DIFFRACTION (2.299 Å)
主引用文献Biochemical and Structural Studies of Uncharacterized Protein PA0743 from Pseudomonas aeruginosa Revealed NAD+-dependent L-Serine Dehydrogenase.
J.Biol.Chem., 287, 2012
3OBB
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BU of 3obb by Molmil
Crystal structure of a possible 3-hydroxyisobutyrate Dehydrogenase from pseudomonas aeruginosa pao1
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
著者Tan, K, Singer, A.U, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Yakunin, A.F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-08-06
公開日2010-08-18
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biochemical and Structural Studies of Uncharacterized Protein PA0743 from Pseudomonas aeruginosa Revealed NAD+-dependent L-Serine Dehydrogenase.
J.Biol.Chem., 287, 2012
8T6I
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BU of 8t6i by Molmil
Structure of VHH-Fab complex with engineered Crystal Kappa region
分子名称: Fab heavy chain, Fab light chain, GLYCEROL, ...
著者Filippova, E.V, Thompson, I, Kossiakoff, A.A.
登録日2023-06-16
公開日2023-11-29
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8T9Y
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BU of 8t9y by Molmil
Structure of VHH-Fab complex with engineered Elbow FNQIKG and Crystal Kappa regions
分子名称: DI(HYDROXYETHYL)ETHER, Fab heavy chain, Fab light chain, ...
著者Filippova, E.V, Thompson, I, Kossiakoff, A.A.
登録日2023-06-26
公開日2023-11-29
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8T58
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BU of 8t58 by Molmil
Structure of VHH-Fab complex with engineered FNQIKG elbow region
分子名称: CHLORIDE ION, Fab heavy chain, Fab light chain, ...
著者Filippova, E.V, Kossiakoff, A.A.
登録日2023-06-12
公開日2023-11-29
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024

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