Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4G9M
DownloadVisualize
BU of 4g9m by Molmil
Crystal structure of the Rhizoctonia solani agglutinin
分子名称: agglutinin
著者Skamnaki, V.T, Kantsadi, A.L, Leonidas, D.D.
登録日2012-07-24
公開日2013-06-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Structural analysis of the Rhizoctonia solani agglutinin reveals a domain-swapping dimeric assembly.
Febs J., 280, 2013
4G8V
DownloadVisualize
BU of 4g8v by Molmil
Crystal structure of Ribonuclease A in complex with 5a
分子名称: 1-{[1-(alpha-L-arabinofuranosyl)-1H-1,2,3-triazol-4-yl]methyl}-2,4-dioxo-1,2,3,4-tetrahydropyrimidine, Ribonuclease pancreatic
著者Chatzileontiadou, D.S.M, Kantsadi, A.L, Leonidas, D.D.
登録日2012-07-23
公開日2012-11-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Triazole pyrimidine nucleosides as inhibitors of Ribonuclease A. Synthesis, biochemical, and structural evaluation.
Bioorg.Med.Chem., 20, 2012
4G9N
DownloadVisualize
BU of 4g9n by Molmil
Crystal structure of the Rhizoctonia solani agglutinin in complex with N'-acetyl-galactosamine
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, agglutinin
著者Skamnaki, V.T, Kantsadi, A.L, Leonidas, D.D.
登録日2012-07-24
公開日2013-06-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of the Rhizoctonia solani agglutinin reveals a domain-swapping dimeric assembly.
Febs J., 280, 2013
1HDK
DownloadVisualize
BU of 1hdk by Molmil
Charcot-Leyden Crystal Protein - pCMBS Complex
分子名称: EOSINOPHIL LYSOPHOSPHOLIPASE, PARA-MERCURY-BENZENESULFONIC ACID
著者Ackerman, S.J, Savage, M.P, Liu, L, Leonidas, D.D, Kwatia, M.A, Swaminathan, G.J, Acharya, K.R.
登録日2000-11-16
公開日2001-11-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Charcot-Leyden Crystal Protein (Galectin-10) is not a Dual Function Galectin with Lysophospholipase Activity But Binds a Lysophospholipase Inhibitor in a Novel Structural Fashion.
J.Biol.Chem., 277, 2002
6Y5O
DownloadVisualize
BU of 6y5o by Molmil
The crystal structure of glycogen phosphorylase in complex with 20
分子名称: 2-(4-fluorophenyl)-5,7-bis(oxidanyl)chromen-4-one, Glycogen phosphorylase, muscle form
著者Kyriakis, E, Koulas, S.M, Skamnaki, V.T, Leonidas, D.D.
登録日2020-02-25
公開日2020-08-19
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Synthetic flavonoid derivatives targeting the glycogen phosphorylase inhibitor site: QM/MM-PBSA motivated synthesis of substituted 5,7-dihydroxyflavones, crystallography, in vitro kinetics and ex-vivo cellular experiments reveal novel potent inhibitors.
Bioorg.Chem., 102, 2020
5LRC
DownloadVisualize
BU of 5lrc by Molmil
Crystal structure of Glycogen Phosphorylase in complex with KS114
分子名称: (1S)-1,5-anhydro-1-(5-phenyl-4H-1,2,4-triazol-3-yl)-D-glucitol, Glycogen phosphorylase, muscle form, ...
著者Kantsadi, A.L, Stravodimos, G.A, Chatzileontiadou, D.S.M, Leonidas, D.D.
登録日2016-08-18
公開日2017-06-14
最終更新日2020-08-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献van der Waals interactions govern C-beta-d-glucopyranosyl triazoles' nM inhibitory potency in human liver glycogen phosphorylase.
J. Struct. Biol., 199, 2017
5LRF
DownloadVisualize
BU of 5lrf by Molmil
Crystal structure of Glycogen Phosphorylase b in complex with KS389
分子名称: (2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-(3-naphthalen-2-yl-1~{H}-1,2,4-triazol-5-yl)oxane-3,4,5-triol, DIMETHYL SULFOXIDE, Glycogen phosphorylase, ...
著者Kantsadi, A.L, Leonidas, D.D.
登録日2016-08-18
公開日2017-06-14
最終更新日2019-02-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献van der Waals interactions govern C-beta-d-glucopyranosyl triazoles' nM inhibitory potency in human liver glycogen phosphorylase.
J. Struct. Biol., 199, 2017
8OJM
DownloadVisualize
BU of 8ojm by Molmil
Galectin-3 in complex with 2,6-anhydro-3-deoxy-3-S-(beta-D-galactopyranosyl)-3-thio-D-glycero-D-galacto-heptonamide
分子名称: (2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxane-2-carboxamide, 1-thio-beta-D-galactopyranose, Galectin-3, ...
著者Tsagkarakou, A.S, Leonidas, D.D.
登録日2023-03-24
公開日2023-09-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Strong Binding of C -Glycosylic1,2-Thiodisaccharides to Galectin-3─Enthalpy-Driven Affinity Enhancement by Water-Mediated Hydrogen Bonds.
J.Med.Chem., 66, 2023
8OJI
DownloadVisualize
BU of 8oji by Molmil
Galectin-3 in complex with Methyl 2,6-anhydro-3-deoxy-3-S-(b-D-galactopyranosyl)-3-thio-D-glycero-L-altro-heptonate
分子名称: 1-thio-beta-D-galactopyranose, CHLORIDE ION, Galectin-3, ...
著者Tsagkarakou, A.S, Leonidas, D.D.
登録日2023-03-24
公開日2023-09-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Strong Binding of C -Glycosylic1,2-Thiodisaccharides to Galectin-3─Enthalpy-Driven Affinity Enhancement by Water-Mediated Hydrogen Bonds.
J.Med.Chem., 66, 2023
5LRE
DownloadVisualize
BU of 5lre by Molmil
Crystal structure of Glycogen Phosphorylase b in complex with KS382
分子名称: (2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-(3-naphthalen-2-yl-1~{H}-1,2,4-triazol-5-yl)oxane-3,4,5-triol, DIMETHYL SULFOXIDE, Glycogen phosphorylase, ...
著者Kantsadi, A.L, Stravodimos, G.A, Kyriakis, E, Chatzileontiadou, D.S.M, Leonidas, D.D.
登録日2016-08-18
公開日2017-05-31
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthetic, enzyme kinetic, and protein crystallographic studies of C-beta-d-glucopyranosyl pyrroles and imidazoles reveal and explain low nanomolar inhibition of human liver glycogen phosphorylase.
Eur J Med Chem, 123, 2016
5LRD
DownloadVisualize
BU of 5lrd by Molmil
Crystal structure of Glycogen Phosphorylase b in complex with KS242
分子名称: (2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-[5-(4-methylphenyl)-4~{H}-1,2,4-triazol-3-yl]oxane-3,4,5-triol, DIMETHYL SULFOXIDE, Glycogen phosphorylase, ...
著者Kantsadi, A.L, Leonidas, D.D.
登録日2016-08-18
公開日2017-06-14
最終更新日2017-06-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献van der Waals interactions govern C-beta-d-glucopyranosyl triazoles' nM inhibitory potency in human liver glycogen phosphorylase.
J. Struct. Biol., 199, 2017
8OJK
DownloadVisualize
BU of 8ojk by Molmil
Galectin-3 in complex with 2,6-anhydro-3-deoxy-3-S-(beta-D-galactopyranosyl)-3-thio-D-glycero-L-altro-heptonamide
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxane-2-carboxamide, 1-thio-beta-D-galactopyranose, Galectin-3, ...
著者Tsagkarakou, A.S, Leonidas, D.D.
登録日2023-03-24
公開日2023-09-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Strong Binding of C -Glycosylic1,2-Thiodisaccharides to Galectin-3─Enthalpy-Driven Affinity Enhancement by Water-Mediated Hydrogen Bonds.
J.Med.Chem., 66, 2023
8OJO
DownloadVisualize
BU of 8ojo by Molmil
Galectin-3 in complex with 2,6-Anhydro-5-S-(beta-D-galactopyranosyl)-5-thio-D-altritol
分子名称: 1-deoxy-alpha-D-mannopyranose, 1-thio-beta-D-galactopyranose, Galectin-3, ...
著者Tsagkarakou, A.S, Leonidas, D.D.
登録日2023-03-24
公開日2023-09-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Strong Binding of C -Glycosylic1,2-Thiodisaccharides to Galectin-3─Enthalpy-Driven Affinity Enhancement by Water-Mediated Hydrogen Bonds.
J.Med.Chem., 66, 2023
8PPN
DownloadVisualize
BU of 8ppn by Molmil
Galectin-3 carbohydrate recognition domain in complex with thiodigalactoside at 1.8 resolution
分子名称: 1-thio-beta-D-galactopyranose-(1-1)-beta-D-galactopyranose, CHLORIDE ION, GLYCEROL, ...
著者Tsagkarakou, A.S, Leonidas, D.D.
登録日2023-07-07
公開日2023-09-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Strong Binding of C -Glycosylic1,2-Thiodisaccharides to Galectin-3─Enthalpy-Driven Affinity Enhancement by Water-Mediated Hydrogen Bonds.
J.Med.Chem., 66, 2023
5O56
DownloadVisualize
BU of 5o56 by Molmil
Glycogen Phosphorylase b in complex with 29b
分子名称: (2~{R},3~{S},4~{R},5~{R},6~{R})-5-azanyl-2-(hydroxymethyl)-6-(3-naphthalen-2-yl-1~{H}-1,2,4-triazol-5-yl)oxane-3,4-diol, Glycogen phosphorylase, muscle form, ...
著者Solovou, T.G.A, Kyriakis, E, Stravodimos, G.A, Kantsadi, A.L, Chatzileontiadou, D.S, Skamnaki, V.T, Leonidas, D.D.
登録日2017-05-31
公開日2017-09-27
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Nanomolar Inhibitors of Glycogen Phosphorylase Based on beta-d-Glucosaminyl Heterocycles: A Combined Synthetic, Enzyme Kinetic, and Protein Crystallography Study.
J. Med. Chem., 60, 2017
1QKQ
DownloadVisualize
BU of 1qkq by Molmil
CHARCOT-LEYDEN CRYSTAL PROTEIN - MANNOSE COMPLEX
分子名称: EOSINOPHIL LYSOPHOSPHOLIPASE, alpha-D-mannopyranose
著者Swaminathan, G.J, Leonidas, D.D, Acharya, K.R.
登録日1999-07-31
公開日2000-01-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Selective recognition of mannose by the human eosinophil Charcot-Leyden crystal protein (galectin-10): a crystallographic study at 1.8 A resolution.
Biochemistry, 38, 1999
1G86
DownloadVisualize
BU of 1g86 by Molmil
CHARCOT-LEYDEN CRYSTAL PROTEIN/N-ETHYLMALEIMIDE COMPLEX
分子名称: CHARCOT-LEYDEN CRYSTAL PROTEIN, N-ETHYLMALEIMIDE
著者Ackerman, S.J, Liu, L, Kwatia, M.A, Savage, M.P, Leonidas, D.D, Swaminathan, G.J, Acharya, K.R.
登録日2000-11-16
公開日2002-06-19
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Charcot-Leyden crystal protein (galectin-10) is not a dual function galectin with lysophospholipase activity but binds a lysophospholipase inhibitor in a novel structural fashion.
J.Biol.Chem., 277, 2002
1WV1
DownloadVisualize
BU of 1wv1 by Molmil
Crystallographic studies on acyl ureas, a new class of inhibitors of glycogenphosphorylase. Broad specificity of the allosteric site
分子名称: 5-[3-({[(2,4-DICHLOROBENZOYL)AMINO]CARBONYL}AMINO)-2-METHYLPHENOXY]PENTANOIC ACID, Glycogen phosphorylase, muscle form, ...
著者Oikonomakos, N.G, Kosmopoulou, M.N, Chrysina, E.D, Leonidas, D.D, Klabunde, T, Wendt, K.U, Defossa, E.
登録日2004-12-10
公開日2005-12-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Crystallographic studies on acyl ureas, a new class of glycogen phosphorylase inhibitors, as potential antidiabetic drugs
Protein Sci., 14, 2005
1WUY
DownloadVisualize
BU of 1wuy by Molmil
Crystallographic studies on acyl ureas, a new class of inhibitors of glycogen phosphorylase. Broad specificity of the allosteric site
分子名称: 4-[3-CHLORO-4-({[(2,4-DICHLOROBENZOYL)AMINO]CARBONYL}AMINO)PHENOXY]BUTANOIC ACID, Glycogen phosphorylase, muscle form, ...
著者Oikonomakos, N.G, Kosmopoulou, M.N, Chrysina, E.D, Leonidas, D.D, Klabunde, T, Wendt, K.U, Defossa, E.
登録日2004-12-09
公開日2005-12-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Crystallographic studies on acyl ureas, a new class of glycogen phosphorylase inhibitors, as potential antidiabetic drugs
Protein Sci., 14, 2005
5JTU
DownloadVisualize
BU of 5jtu by Molmil
Crystal structure of GPb in complex with 8b
分子名称: (1S)-1,5-anhydro-1-[5-(naphthalen-2-yl)-1H-imidazol-2-yl]-D-glucitol, DIMETHYL SULFOXIDE, Glycogen phosphorylase, ...
著者Kantsadi, A.L, Stravodimos, G.A, Chatzileontiadou, D.S.M, Leonidas, D.D.
登録日2016-05-09
公開日2016-08-24
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Synthetic, enzyme kinetic, and protein crystallographic studies of C-beta-d-glucopyranosyl pyrroles and imidazoles reveal and explain low nanomolar inhibition of human liver glycogen phosphorylase.
Eur.J.Med.Chem., 123, 2016
5JTT
DownloadVisualize
BU of 5jtt by Molmil
Crystal structure of GPb in complex with 8a
分子名称: (1S)-1,5-anhydro-1-(5-phenyl-1H-imidazol-2-yl)-D-glucitol, DIMETHYL SULFOXIDE, Glycogen phosphorylase, ...
著者Kantsadi, A.L, Stravodimos, G.A, Chatzileontiadou, D.S.M, Leonidas, D.D.
登録日2016-05-09
公開日2016-08-24
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Synthetic, enzyme kinetic, and protein crystallographic studies of C-beta-d-glucopyranosyl pyrroles and imidazoles reveal and explain low nanomolar inhibition of human liver glycogen phosphorylase.
Eur.J.Med.Chem., 123, 2016
1UZU
DownloadVisualize
BU of 1uzu by Molmil
Glycogen Phosphorylase b in complex with indirubin-5'-sulphonate
分子名称: 2',3-DIOXO-1,1',2',3-TETRAHYDRO-2,3'-BIINDOLE-5'-SULFONIC ACID, GLYCOGEN PHOSPHORYLASE, MUSCLE FORM, ...
著者Kosmopoulou, M.N, Leonidas, D.D, Chrysina, E.D, Bischler, N, Eisenbrand, G, Sakarellos, C.E, Pauptit, R, Oikonomakos, N.G.
登録日2004-03-16
公開日2004-05-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Binding of the potential antitumour agent indirubin-5-sulphonate at the inhibitor site of rabbit muscle glycogen phosphorylase b. Comparison with ligand binding to pCDK2-cyclin A complex.
Eur. J. Biochem., 271, 2004
1WW2
DownloadVisualize
BU of 1ww2 by Molmil
Crystallographic studies on two bioisosteric analogues, N-acetyl-beta-D-glucopyranosylamine and N-trifluoroacetyl-beta-D-glucopyranosylamine, potent inhibitors of muscle glycogen phosphorylase
分子名称: Glycogen phosphorylase, muscle form, N-acetyl-beta-D-glucopyranosylamine, ...
著者Anagnostou, E, Kosmopoulou, M.N, Chrysina, E.D, Leonidas, D.D, Hadjiloi, T, Tiraidis, C, Zographos, S.E, Gyorgydeak, Z, Somsak, L, Docsa, T, Gergely, P, Kolisis, F.N, Oikonomakos, N.G.
登録日2004-12-30
公開日2005-12-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic studies on two bioisosteric analogues, N-acetyl-beta-d-glucopyranosylamine and N-trifluoroacetyl-beta-d-glucopyranosylamine, potent inhibitors of muscle glycogen phosphorylase
Bioorg.Med.Chem., 14, 2006
2FFR
DownloadVisualize
BU of 2ffr by Molmil
Crystallographic studies on N-azido-beta-D-glucopyranosylamine, an inhibitor of glycogen phosphorylase: comparison with N-acetyl-beta-D-glucopyranosylamine
分子名称: Glycogen phosphorylase, muscle form, N-(azidoacetyl)-beta-D-glucopyranosylamine, ...
著者Petsalakis, E.I, Chrysina, E.D, Tiraidis, C, Hadjiloi, T, Leonidas, D.D, Oikonomakos, N.G, Aich, U, Varghese, B, Loganathan, D.
登録日2005-12-20
公開日2006-06-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystallographic studies on N-azidoacetyl-beta-d-glucopyranosylamine, an inhibitor of glycogen phosphorylase: Comparison with N-acetyl-beta-d-glucopyranosylamine.
Bioorg.Med.Chem., 14, 2006
3IIM
DownloadVisualize
BU of 3iim by Molmil
The structure of hCINAP-dADP complex at 2.0 angstroms resolution
分子名称: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Zographos, S.E, Drakou, C.E, Leonidas, D.D.
登録日2009-08-02
公開日2010-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献hCINAP is an atypical mammalian nuclear adenylate kinase with an ATPase motif: Structural and functional studies.
Proteins, 80, 2012

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon