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7OQC
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BU of 7oqc by Molmil
The U1 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
分子名称: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A), Pre-mRNA-processing factor 39, ...
著者Zhang, Z, Rigo, N, Dybkov, O, Fourmann, J, Will, C.L, Kumar, V, Urlaub, H, Stark, H, Luehrmann, R.
登録日2021-06-03
公開日2021-08-11
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural insights into how Prp5 proofreads the pre-mRNA branch site.
Nature, 596, 2021
2AUT
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BU of 2aut by Molmil
Crystal structure of Lys154Asn mutant of mature AphA of S. typhimurium
分子名称: AphA, MAGNESIUM ION, PHOSPHATE ION, ...
著者Makde, R.D, Gupta, G.D, Kumar, V.
登録日2005-08-29
公開日2006-09-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and mutational analyses reveal the functional role of active-site Lys-154 and Asp-173 of Salmonella typhimurium AphA protein.
Arch.Biochem.Biophys., 464, 2007
2IPB
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BU of 2ipb by Molmil
Crystal structure of T159D mutant of S. Typhimurium PhoN protein
分子名称: Class A nonspecific acid phosphatase PhoN
著者Makde, R.D, Kumar, V.
登録日2006-10-12
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Structure and Mutational Analysis of the PhoN Protein of Salmonella typhimurium Provide Insight into Mechanistic Details
Biochemistry, 46, 2007
2AKC
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BU of 2akc by Molmil
Crystal structure of tungstate complex of the PhoN protein from S. typhimurium
分子名称: TUNGSTATE(VI)ION, class A nonspecific acid phosphatase PhoN
著者Makde, R.D, Kumar, V.
登録日2005-08-03
公開日2006-05-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Mutational Analysis of the PhoN Protein of Salmonella typhimurium Provide Insight into Mechanistic Details.
Biochemistry, 46, 2007
7D6W
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BU of 7d6w by Molmil
Crystal structure of Phycocyanin from Synechococcus sp. R42DM
分子名称: PHYCOCYANOBILIN, Phycocyanin alpha subunit, Phycocyanin beta subunit
著者Patel, S.N, Sonani, R.R, Chaubey, M.G, Singh, N.K, Kumar, V, Madamwar, D.
登録日2020-10-02
公開日2021-10-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of Synechococcus phycocyanin: implications of light-harvesting and antioxidant properties.
3 Biotech, 13, 2023
1Z5G
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BU of 1z5g by Molmil
Crystal structure of Salmonella typhimurium AphA protein
分子名称: AphA protein, MAGNESIUM ION, PHOSPHATE ION
著者Makde, R.D, Kumar, V.
登録日2005-03-18
公開日2006-03-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and mutational analyses reveal the functional role of active-site Lys-154 and Asp-173 of Salmonella typhimurium AphA protein.
Arch.Biochem.Biophys., 464, 2007
1Z5U
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BU of 1z5u by Molmil
Crystal structure of S. typhimurium AphA complexed with cyclic-AMP
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, AphA protein, MAGNESIUM ION
著者Makde, R.D, Kumar, V.
登録日2005-03-20
公開日2006-03-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Function of class-B bacterial non-specific acid phosphatase: functional role of invariant Lys154
To be Published
1Z88
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BU of 1z88 by Molmil
Crystal structure of Lys154Arg mutant of mature AphA of S. typhimurium
分子名称: AphA protein, MAGNESIUM ION
著者Makde, R.D, Gupta, G.D, Kumar, V.
登録日2005-03-30
公開日2006-04-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and mutational analyses reveal the functional role of active-site Lys-154 and Asp-173 of Salmonella typhimurium AphA protein.
Arch.Biochem.Biophys., 464, 2007
3ES6
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BU of 3es6 by Molmil
Crystal structure of the novel complex formed between Zinc 2-glycoprotein (ZAG) and Prolactin inducible protein (PIP) from human seminal plasma
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, HEXAETHYLENE GLYCOL, ...
著者Hassan, M.I, Bilgrami, S, Kumar, V, Singh, N, Yadav, S, Kaur, P, Singh, T.P.
登録日2008-10-04
公開日2008-10-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.23 Å)
主引用文献Crystal structure of the novel complex formed between zinc alpha2-glycoprotein (ZAG) and prolactin-inducible protein (PIP) from human seminal plasma
J.Mol.Biol., 384, 2008
6IUY
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BU of 6iuy by Molmil
Structure of DsGPDH of Dunaliella salina
分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, GLYCEROL, Glycerol-3-phosphate dehydrogenase [NAD(+)], ...
著者He, Q, Toh, J.D, Ero, R, Qiao, Z, Kumar, V, Gao, Y.G.
登録日2018-12-01
公開日2019-12-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The unusual di-domain structure of Dunaliella salina glycerol-3-phosphate dehydrogenase enables direct conversion of dihydroxyacetone phosphate to glycerol.
Plant J., 102, 2020
4V90
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BU of 4v90 by Molmil
Thermus thermophilus Ribosome
分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Chen, Y, Feng, S, Kumar, V, Ero, R, Gao, Y.G.
登録日2014-02-22
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structure of EF-G-ribosome complex in a pretranslocation state.
Nat. Struct. Mol. Biol., 20, 2013
6CF9
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BU of 6cf9 by Molmil
Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni at 2.3A resolution in I23 space group
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, ACETATE ION, Lytic transglycosylase
著者van den Akker, F, Kumar, V.
登録日2018-02-13
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural studies and molecular dynamics simulations suggest a processive mechanism of exolytic lytic transglycosylase from Campylobacter jejuni.
PLoS ONE, 13, 2018
6Q1F
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BU of 6q1f by Molmil
Atomic structure of the Human Herpesvirus 6B Capsid and Capsid-Associated Tegument Complexes
分子名称: Large structural phosphoprotein, Major capsid protein, Small capsomere-interacting protein, ...
著者Zhang, Y.B, Liu, W, Li, Z.H, Kumar, V, Alvarez-Cabrera, A.L, Leibovitch, E, Cui, Y.X, Mei, Y, Bi, G.Q, Jacobson, S, Zhou, Z.H.
登録日2019-08-03
公開日2019-12-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Atomic structure of the human herpesvirus 6B capsid and capsid-associated tegument complexes.
Nat Commun, 10, 2019
6PXX
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BU of 6pxx by Molmil
Class D beta-lactamase in complex with beta-lactam antibiotic
分子名称: (2~{S},3~{R})-3-methyl-2-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl]sulfanyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者van den Akker, F, Kumar, V.
登録日2019-07-28
公開日2019-10-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of The OXA-48 Carbapenemase Bound to A "Poor" Carbapenem Substrate, Doripenem.
Antibiotics, 8, 2019
6CFC
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BU of 6cfc by Molmil
Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni in complex with Bulgecin A
分子名称: 4-O-(4-O-SULFONYL-N-ACETYLGLUCOSAMININYL)-5-METHYLHYDROXY-L-PROLINE-TAURINE, Lytic transglycosylase, SULFATE ION
著者van den Akker, F, Kumar, V.
登録日2018-02-14
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural studies and molecular dynamics simulations suggest a processive mechanism of exolytic lytic transglycosylase from Campylobacter jejuni.
PLoS ONE, 13, 2018
6CF8
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BU of 6cf8 by Molmil
Crystal structure of Cj0843 lytic transglycosylase of Campylobacter jejuni at 1.87A resolution
分子名称: Lytic transglycosylase, SULFATE ION
著者van den Akker, F, Kumar, V, Vijayaraghavan, J.
登録日2018-02-13
公開日2018-05-30
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural studies and molecular dynamics simulations suggest a processive mechanism of exolytic lytic transglycosylase from Campylobacter jejuni.
PLoS ONE, 13, 2018
7LGK
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BU of 7lgk by Molmil
Crystal structure of soluble guanylate cyclase activator runcaciguat (BAY 1101042) bound to nostoc H-NOX domain
分子名称: CHLORIDE ION, GLYCEROL, H-NOX domain protein, ...
著者van den Akker, F, Kumar, V, Schaefer, M.
登録日2021-01-20
公開日2021-05-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of the Soluble Guanylate Cyclase Activator Runcaciguat (BAY 1101042).
J.Med.Chem., 64, 2021
2AKR
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BU of 2akr by Molmil
Structural basis of sulfatide presentation by mouse CD1d
分子名称: (15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zajonc, D.M, Halder, R, Wu, D, Maricic, I, Roy, K, Wong, C.-H, Kumar, V, Wilson, I.A.
登録日2005-08-03
公開日2005-12-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for CD1d presentation of a sulfatide derived from myelin and its implications for autoimmunity
J.Exp.Med., 202, 2005
2QVA
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BU of 2qva by Molmil
Crystal structure of Drosophila melanogaster Translin protein
分子名称: GM27569p
著者Gupta, G.D, Makde, R.D, Kumar, V.
登録日2007-08-08
公開日2008-08-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structures of Drosophila mutant translin and characterization of translin variants reveal the structural plasticity of translin proteins.
Febs J., 275, 2008
2QRX
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BU of 2qrx by Molmil
Crystal structure of Drosophila melanogaster Translin protein
分子名称: GM27569p
著者Gupta, G.D, Makde, R.D, Kumar, V.
登録日2007-07-30
公開日2008-08-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal structures of Drosophila mutant translin and characterization of translin variants reveal the structural plasticity of translin proteins.
Febs J., 275, 2008
4YJJ
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BU of 4yjj by Molmil
Crystal structure of Phycocyanin from marine cyanobacterium Phormidium rubidum sp. A09DM
分子名称: Alpha Subunit of Cyanobacterial Phycocyanine protein, Beta Subunit of Cyanobacterial Phycocyanine protein, PHYCOCYANOBILIN
著者Gupta, G.D, Kumar, V, Sonani, R.R, Madamwar, D.
登録日2015-03-03
公開日2016-03-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Phycocyanin from marine cyanobacterium Phormidium rubidum sp. A09DM
To Be Published
3WR1
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BU of 3wr1 by Molmil
Crystal structure of Cormorant (Phalacrocorax carbo) hemoglobin
分子名称: Hemoglobin subunit alpha-A, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Jagadeesan, G, Vinodh Kumar, V, Peters, H.G, Malathy, P, Harikrishna Etti, S, Gunasekaran, K, Aravindhan, S.
登録日2014-02-09
公開日2014-03-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of Cormorant (Phalacrocorax carbo) hemoglobin
To be Published
5XWH
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BU of 5xwh by Molmil
Structure of FrnE, a novel disulfide oxidoreductase from Deinococcus radiodurans crystallized in the presence of GSH
分子名称: FrnE protein
著者Bihani, S.C, Panicker, L, Kumar, V.
登録日2017-06-29
公開日2018-07-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of FrnE, a novel disulfide oxidoreductase from Deinococcus radiodurans crystallized in the presence of GSH
To Be Published
4ELK
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BU of 4elk by Molmil
Crystal structure of the Hy19.3 type II NKT TCR
分子名称: ACETATE ION, FORMIC ACID, Hy19.3 TCR alpha chain (mouse variable domain, ...
著者Girardi, E, Maricic, I, Wang, J, Mac, T.T, Iyer, P, Kumar, V, Zajonc, D.M.
登録日2012-04-10
公開日2012-07-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens.
Nat.Immunol., 13, 2012
8Q7N
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BU of 8q7n by Molmil
cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, MINX pre-mRNA, Microfibrillar-associated protein 1, ...
著者Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Urlaub, H, Stark, H, Luehrmann, R.
登録日2023-08-16
公開日2024-01-24
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM analyses of dimerized spliceosomes provide new insights into the functions of B complex proteins.
Embo J., 43, 2024

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件を2024-08-07に公開中

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