Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4QXX
DownloadVisualize
BU of 4qxx by Molmil
Structure of the amyloid forming peptide GNLVS (residues 26-30) from the eosinophil major basic protein (EMBP)
分子名称: Bone marrow proteoglycan
著者Soriaga, A.B, Soragni, A, Sawaya, M.R, Eisenberg, D.
登録日2014-07-22
公開日2015-03-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.445 Å)
主引用文献Toxicity of Eosinophil MBP Is Repressed by Intracellular Crystallization and Promoted by Extracellular Aggregation.
Mol.Cell, 57, 2015
3UWP
DownloadVisualize
BU of 3uwp by Molmil
Crystal structure of Dot1l in complex with 5-iodotubercidin
分子名称: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, Histone-lysine N-methyltransferase, H3 lysine-79 specific, ...
著者Yu, W, Tempel, W, Smil, D, Schapira, M, Li, Y, Vedadi, M, Nguyen, K.T, Wernimont, A.K, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2011-12-02
公開日2012-03-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Catalytic site remodelling of the DOT1L methyltransferase by selective inhibitors.
Nat Commun, 3, 2012
1ZHK
DownloadVisualize
BU of 1zhk by Molmil
Crystal structure of HLA-B*3501 presenting 13-mer EBV antigen LPEPLPQGQLTAY
分子名称: Beta-2-microglobulin, EBV-peptide LPEPLPQGQLTAY, HLA class I histocompatibility antigen, ...
著者Tynan, F.E, Borg, N.A, Miles, J.J, Beddoe, T, El-Hassen, D, Silins, S.L, van Zuylen, W.J, Purcell, A.W, Kjer-Nielsen, L, McCluskey, J, Burrows, S.R, Rossjohn, J.
登録日2005-04-26
公開日2005-05-17
最終更新日2014-04-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The high resolution structures of highly bulged viral epitopes bound to the major histocompatability class I: Implications for T-cell receptor engagement and T-cell immunodominance
J.Biol.Chem., 280, 2005
6WYW
DownloadVisualize
BU of 6wyw by Molmil
Crystal structure of Pseudomonas 7A Glutaminase-Asparaginase in complex with L-Asp at pH 4.5
分子名称: ASPARTIC ACID, Glutaminase-asparaginase
著者Strzelczyk, P, Zhang, D, Wlodawer, A, Lubkowski, J.
登録日2020-05-13
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Generalized enzymatic mechanism of catalysis by tetrameric L-asparaginases from mesophilic bacteria.
Sci Rep, 10, 2020
1ZF4
DownloadVisualize
BU of 1zf4 by Molmil
ATC Four-stranded DNA Holliday Junction
分子名称: 5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3', SODIUM ION
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-19
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZFF
DownloadVisualize
BU of 1zff by Molmil
TTC Duplex B-DNA
分子名称: 5'-D(*CP*CP*GP*AP*AP*TP*TP*CP*GP*G)-3'
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-20
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (0.94 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
6WCJ
DownloadVisualize
BU of 6wcj by Molmil
Asymmetric vertex of the clathrin minicoat cage
分子名称: Clathrin heavy chain 1, Clathrin light chain B
著者Paraan, M, Mendez, J, Sharum, S, Kurtin, D, He, H, Stagg, S.
登録日2020-03-30
公開日2020-08-19
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.3 Å)
主引用文献The structures of natively assembled clathrin-coated vesicles.
Sci Adv, 6, 2020
1ZMY
DownloadVisualize
BU of 1zmy by Molmil
cAbBCII-10 VHH framework with CDR loops of cAbLys3 grafted on it and in complex with hen egg white lysozyme
分子名称: Antibody cabbcII-10:lys3, Lysozyme C
著者Saerens, D, Pellis, M, Loris, R, Pardon, E, Dumoulin, M, Matagne, A, Wyns, L, Muyldermans, S, Conrath, K.
登録日2005-05-11
公開日2005-10-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Identification of a universal VHH framework to graft non-canonical antigen-binding loops of camel single-domain antibodies
J.Mol.Biol., 352, 2005
1ZK9
DownloadVisualize
BU of 1zk9 by Molmil
NF-kB RelB forms an intertwined homodimer
分子名称: Transcription factor RelB
著者Huang, D.B, Vu, D, Ghosh, G.
登録日2005-05-02
公開日2005-05-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献NF-kappaB RelB Forms an Intertwined Homodimer.
Structure, 13, 2005
1ZLP
DownloadVisualize
BU of 1zlp by Molmil
Petal death protein PSR132 with cysteine-linked glutaraldehyde forming a thiohemiacetal adduct
分子名称: 5-HYDROXYPENTANAL, MAGNESIUM ION, petal death protein
著者Teplyakov, A, Liu, S, Lu, Z, Howard, A, Dunaway-Mariano, D, Herzberg, O.
登録日2005-05-08
公開日2006-01-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of the Petal Death Protein from Carnation Flower.
Biochemistry, 44, 2005
1YVX
DownloadVisualize
BU of 1yvx by Molmil
Hepatitis C Virus RNA Polymerase Genotype 2a In Complex With Non- Nucleoside Analogue Inhibitor
分子名称: 3-[ISOPROPYL(4-METHYLBENZOYL)AMINO]-5-PHENYLTHIOPHENE-2-CARBOXYLIC ACID, RNA dependent RNA polymerase, SULFATE ION
著者Biswal, B.K, Cherney, M.M, Wang, M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Nicolas, O, Bedard, J, James, M.N.G.
登録日2005-02-16
公開日2005-03-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the RNA dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors.
J.Biol.Chem., 280, 2005
6WNT
DownloadVisualize
BU of 6wnt by Molmil
50S ribosomal subunit without free 5S rRNA and perturbed PTC
分子名称: 23s-5s joint ribosomal RNA, 50S ribosomal protein L1, 50S ribosomal protein L10, ...
著者Loveland, A.B, Korostelev, A.A, Mankin, A.S, Huang, S, Aleksashin, N.A, Klepacki, D, Reier, K, Kefi, A, Szal, A, Remme, J, Jaeger, L, Vazquez-Laslop, N.
登録日2020-04-23
公開日2020-06-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Ribosome engineering reveals the importance of 5S rRNA autonomy for ribosome assembly.
Nat Commun, 11, 2020
6WEL
DownloadVisualize
BU of 6wel by Molmil
Structure of cGMP-unbound F403V/V407A mutant TAX-4 reconstituted in lipid nanodiscs
分子名称: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cyclic nucleotide-gated cation channel, ...
著者Zheng, X, Fu, Z, Su, D, Zhang, Y, Li, M, Pan, Y, Li, H, Li, S, Grassucci, R.A, Ren, Z, Hu, Z, Li, X, Zhou, M, Li, G, Frank, J, Yang, J.
登録日2020-04-02
公開日2020-06-03
最終更新日2020-07-22
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Mechanism of ligand activation of a eukaryotic cyclic nucleotide-gated channel.
Nat.Struct.Mol.Biol., 27, 2020
6WFL
DownloadVisualize
BU of 6wfl by Molmil
Camphor soaked P450cam D251E
分子名称: 5-EXO-HYDROXYCAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Amaya, J.A, Poulos, T.L, Batabyal, D.
登録日2020-04-03
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Proton Relay Network in the Bacterial P450s: CYP101A1 and CYP101D1.
Biochemistry, 59, 2020
1YYN
DownloadVisualize
BU of 1yyn by Molmil
A common binding site for disialyllactose and a tri-peptide in the C-fragment of tetanus neurotoxin
分子名称: N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-3)-alpha-D-galactopyranose-(1-4)-beta-D-glucopyranose, Tetanus toxin
著者Seetharaman, J, Eswaramoorthy, S, Kumaran, D, Swaminathan, S.
登録日2005-02-25
公開日2005-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Common binding site for disialyllactose and tri-peptide in C-fragment of tetanus neurotoxin
Proteins, 61, 2005
6TGC
DownloadVisualize
BU of 6tgc by Molmil
CryoEM structure of the ternary DOCK2-ELMO1-RAC1 complex.
分子名称: Dedicator of cytokinesis protein 2, Engulfment and cell motility protein 1, Ras-related C3 botulinum toxin substrate 1
著者Chang, L, Yang, J, Chang, J.H, Zhang, Z, Boland, A, McLaughlin, S.H, Abu-Thuraia, A, Killoran, R.C, Smith, M.J, Cote, J.F, Barford, D.
登録日2019-11-15
公開日2020-07-29
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of the DOCK2-ELMO1 complex provides insights into regulation of the auto-inhibited state.
Nat Commun, 11, 2020
6WYX
DownloadVisualize
BU of 6wyx by Molmil
Crystal structure of Pseudomonas 7A Glutaminase-Asparaginase in complex with L-Asp at pH 5.0
分子名称: ASPARTIC ACID, GLYCEROL, Glutaminase-asparaginase
著者Strzelczyk, P, Zhang, D, Wlodawer, A, Lubkowski, J.
登録日2020-05-13
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Generalized enzymatic mechanism of catalysis by tetrameric L-asparaginases from mesophilic bacteria.
Sci Rep, 10, 2020
4AFK
DownloadVisualize
BU of 4afk by Molmil
In meso structure of alginate transporter, AlgE, from Pseudomonas aeruginosa, PAO1
分子名称: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ...
著者Tan, J, Pye, V.E, Aragao, D, Caffrey, M.
登録日2012-01-19
公開日2013-02-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.897 Å)
主引用文献A Conformational Landscape for Alginate Secretion Across the Outer Membrane of Pseudomonas Aeruginosa.
Acta Crystallogr.,Sect.D, 70, 2014
1Y7R
DownloadVisualize
BU of 1y7r by Molmil
1.7 A Crystal Structure of Protein of Unknown Function SA2161 from Meticillin-Resistant Staphylococcus aureus, Probable Acetyltransferase
分子名称: PHOSPHATE ION, hypothetical protein SA2161
著者Qiu, Y, Zhang, R, Collart, F, Holzle, D, Joachimiak, A, Kossiakoff, A, Midwest Center for Structural Genomics (MCSG)
登録日2004-12-09
公開日2005-01-25
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献1.7A Crystal Structure of Hypothetical Protein SA2161 from Meticillin-Resistant Staphylococcus aureus
To be Published
6WNX
DownloadVisualize
BU of 6wnx by Molmil
FBXW11-SKP1 in complex with a pSer33/pSer37 Beta-Catenin peptide
分子名称: Catenin beta-1, F-box/WD repeat-containing protein 11, GLYCEROL, ...
著者Ivanochko, D, Edwards, A.M, Bountra, C, Arrowsmith, C.H, Boettcher, J, Structural Genomics Consortium (SGC)
登録日2020-04-23
公開日2020-05-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献FBXW11-SKP1 in complex with a pSer33/pSer37 Beta-Catenin peptide
To Be Published
6WP6
DownloadVisualize
BU of 6wp6 by Molmil
Pyruvate Kinase M2 mutant-S37E K433E
分子名称: GLYCEROL, MAGNESIUM ION, NITRATE ION, ...
著者Nandi, S, Razzaghi, M, Srivastava, D, Dey, M.
登録日2020-04-26
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis for allosteric regulation of pyruvate kinase M2 by phosphorylation and acetylation.
J.Biol.Chem., 295, 2020
2PZG
DownloadVisualize
BU of 2pzg by Molmil
Minimal human CFTR first nucleotide binding domain as a monomer
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, GLYCEROL, ...
著者Atwell, S, Conners, K, Emtage, S, Gheyi, T, Glenn, N.R, Hendle, J, Lewis, H.A, Lu, F, Rodgers, L.A, Romero, R, Sauder, J.M, Smith, D, Tien, H, Wasserman, S.R, Zhao, X.
登録日2007-05-18
公開日2007-10-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of a minimal human CFTR first nucleotide-binding domain as a monomer, head-to-tail homodimer, and pathogenic mutant.
Protein Eng.Des.Sel., 23, 2010
1Y7Q
DownloadVisualize
BU of 1y7q by Molmil
Mammalian SCAN domain dimer is a domain-swapped homologue of the HIV capsid C-terminal domain
分子名称: Zinc finger protein 174
著者Ivanov, D, Stone, J.R, Maki, J.L, Collins, T, Wagner, G.
登録日2004-12-09
公開日2005-01-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Mammalian SCAN Domain Dimer Is a Domain-Swapped Homolog of the HIV Capsid C-Terminal Domain
Mol.Cell, 17, 2005
6WVT
DownloadVisualize
BU of 6wvt by Molmil
Structural basis of alphaE-catenin - F-actin catch bond behavior
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Xu, X.P, Pokutta, S, Torres, M, Swift, M.F, Hanein, D, Volkmann, N, Weis, W.I.
登録日2020-05-06
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural basis of alpha E-catenin-F-actin catch bond behavior.
Elife, 9, 2020
4DDZ
DownloadVisualize
BU of 4ddz by Molmil
Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis
分子名称: GLUCOSYL-3-PHOSPHOGLYCERATE SYNTHASE (GpgS), GLYCEROL
著者Albesa-Jove, D, Urresti, S, Gest, P.M, van der Woerd, M, Jackson, M, Guerin, M.E.
登録日2012-01-19
公開日2012-06-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanistic insights into the retaining glucosyl-3-phosphoglycerate synthase from mycobacteria.
J.Biol.Chem., 287, 2012

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon