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5UFR
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BU of 5ufr by Molmil
Structure of RORgt bound to
分子名称: (S)-[4-chloro-2-(dimethylamino)-3-phenylquinolin-6-yl](1-methyl-1H-imidazol-5-yl)(pyridin-4-yl)methanol, Nuclear receptor ROR-gamma
著者Spurlino, J, Abad, M.
登録日2017-01-05
公開日2017-04-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.068 Å)
主引用文献Identification and structure activity relationships of quinoline tertiary alcohol modulators of ROR gamma t.
Bioorg. Med. Chem. Lett., 27, 2017
1TFB
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BU of 1tfb by Molmil
NMR STUDIES OF HUMAN GENERAL TRANSCRIPTION FACTOR TFIIB: DYNAMICS AND INTERACTION WITH VP16 ACTIVATION DOMAIN, 20 STRUCTURES
分子名称: TFIIB
著者Bagby, S, Ikura, M.
登録日1996-11-14
公開日1997-03-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Human general transcription factor TFIIB: conformational variability and interaction with VP16 activation domain.
Biochemistry, 37, 1998
3P0B
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BU of 3p0b by Molmil
Thermus thermophilus family GH57 branching enzyme: crystal structure, mechanism of action and products formed
分子名称: GLYCEROL, TT1467 protein
著者Pijning, T, Dijkstra, B.W.
登録日2010-09-28
公開日2010-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Thermus thermophilus GLYCOSYL HYDROLASE FAMILY 57 branching enzyme: crystal structure, mechanism of action and products formed
To be Published
7DE2
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BU of 7de2 by Molmil
iron and alpha-ketoglutarate-dependent endoperoxidase NvfI
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, NvfI, ...
著者Zhai, R, Mori, T, Abe, I.
登録日2020-11-01
公開日2021-07-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular insights into the endoperoxide formation by Fe(II)/ alpha-KG-dependent oxygenase NvfI.
Nat Commun, 12, 2021
5UP4
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BU of 5up4 by Molmil
Structure of the HIV-1 Capsid Protein and spacer peptide 1 by Cryo-EM
分子名称: HIV-1 Capsid Protein and spacer peptide 1
著者Perilla, J.R, Schirra, R, Zhang, P, Schulten, K.
登録日2017-02-01
公開日2017-12-06
最終更新日2017-12-13
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Quenching protein dynamics interferes with HIV capsid maturation.
Nat Commun, 8, 2017
6IUK
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BU of 6iuk by Molmil
Cryo-EM structure of Murine Norovirus capsid
分子名称: Major capsid protein VP1
著者Song, C, Miyazaki, N, Iwasaki, K, Katayama, K, Murata, K.
登録日2018-11-28
公開日2020-02-26
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Dynamic rotation of the protruding domain enhances the infectivity of norovirus.
Plos Pathog., 16, 2020
6JI1
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BU of 6ji1 by Molmil
Tetrameric PepTSo2 incorporated in salipro nano particle
分子名称: Proton:oligopeptide symporter POT family
著者Kawamoto, A, Matoba, K, Takagi, J.
登録日2019-02-19
公開日2019-05-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis for oligomerization of the prokaryotic peptide transporter PepTSo2.
Acta Crystallogr.,Sect.F, 75, 2019
7NMZ
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BU of 7nmz by Molmil
Structure of 14-3-3 eta in complex with Nedd4-2(335-455) containing two 14-3-3 binding motifs Ser342 and Ser448
分子名称: 14-3-3 protein eta, E3 ubiquitin-protein ligase NEDD4-like
著者Pohl, P, Obsil, T, Obsilova, V.
登録日2021-02-23
公開日2021-07-21
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献14-3-3-protein regulates Nedd4-2 by modulating interactions between HECT and WW domains.
Commun Biol, 4, 2021
7ENB
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BU of 7enb by Molmil
iron and alpha-ketoglutarate-dependent endoperoxidase NvfI with different conformation
分子名称: FE (III) ION, N-OXALYLGLYCINE, NvfI, ...
著者Mori, T, Abe, I.
登録日2021-04-16
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular insights into the endoperoxide formation by Fe(II)/ alpha-KG-dependent oxygenase NvfI.
Nat Commun, 12, 2021
7EMZ
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BU of 7emz by Molmil
iron and alpha-ketoglutarate-dependent endoperoxidase NvfI W199F variant
分子名称: FE (III) ION, N-OXALYLGLYCINE, NvfI W199F, ...
著者Mori, T, Abe, I.
登録日2021-04-15
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular insights into the endoperoxide formation by Fe(II)/ alpha-KG-dependent oxygenase NvfI.
Nat Commun, 12, 2021
7XWA
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BU of 7xwa by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Omicron BA.4/5 variant spike protein in complex with its receptor ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Suzuki, T, Kimura, K, Hashiguchi, T.
登録日2022-05-26
公開日2022-09-28
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Virological characteristics of the SARS-CoV-2 Omicron BA.2 subvariants, including BA.4 and BA.5.
Cell, 185, 2022
5XPF
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BU of 5xpf by Molmil
High-resolution X-ray structure of the T26H mutant of T4 lysozyme
分子名称: CHLORIDE ION, Endolysin, GLYCEROL, ...
著者Hiromoto, T, Kuroki, R.
登録日2017-06-01
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Neutron structure of the T26H mutant of T4 phage lysozyme provides insight into the catalytic activity of the mutant enzyme and how it differs from that of wild type.
Protein Sci., 26, 2017
5VA9
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BU of 5va9 by Molmil
Human pancreatic alpha amylase in complex with peptide inhibitor piHA-L5(d10Y)
分子名称: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase, ...
著者Caner, S, Brayer, G.D.
登録日2017-03-24
公開日2018-03-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Folding Then Binding vs Folding Through Binding in Macrocyclic Peptide Inhibitors of Human Pancreatic alpha-Amylase.
Acs Chem.Biol., 14, 2019
5U3A
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BU of 5u3a by Molmil
Ultra High Resolution Crystal Structure of Human Pancreatic Alpha Amylase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Caner, S, Brayer, G.D.
登録日2016-12-01
公開日2017-12-06
最終更新日2022-04-27
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Folding Then Binding vs Folding Through Binding in Macrocyclic Peptide Inhibitors of Human Pancreatic alpha-Amylase.
Acs Chem.Biol., 14, 2019
5UV5
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BU of 5uv5 by Molmil
Crystal Structure of a 2-Hydroxyisoquinoline-1,3-dione RNase H Active Site Inhibitor with Multiple Binding Modes to HIV Reverse Transcriptase
分子名称: 7-(furan-2-yl)-2-hydroxyisoquinoline-1,3(2H,4H)-dione, MANGANESE (II) ION, Reverse transcriptase/ribonuclease H, ...
著者Kirby, K.A, Sarafianos, S.G.
登録日2017-02-19
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A 2-Hydroxyisoquinoline-1,3-Dione Active-Site RNase H Inhibitor Binds in Multiple Modes to HIV-1 Reverse Transcriptase.
Antimicrob. Agents Chemother., 61, 2017
5WZY
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BU of 5wzy by Molmil
Crystal structure of the P2X4 receptor from zebrafish in the presence of CTP at 2.8 Angstroms
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYTIDINE-5'-TRIPHOSPHATE, GLYCEROL, ...
著者Kasuya, G, Hattori, M, Nureki, O.
登録日2017-01-19
公開日2017-04-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.799 Å)
主引用文献Structural insights into the nucleotide base specificity of P2X receptors
Sci Rep, 7, 2017
5GW9
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BU of 5gw9 by Molmil
Crystal structure of C163, a backbone circularized G-CSF
分子名称: Granulocyte colony-stimulating factor
著者Miyafusa, T, Honda, S.
登録日2016-09-09
公開日2017-09-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into the backbone-circularized granulocyte colony-stimulating factor containing a short connector.
Biochem. Biophys. Res. Commun., 500, 2018
5GMT
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BU of 5gmt by Molmil
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai
分子名称: Alginate lyase
著者Qin, H.-M, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2016-07-16
公開日2017-01-04
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structure and Polymannuronate Specificity of a Eukaryotic Member of Polysaccharide Lyase Family 14.
J. Biol. Chem., 292, 2017
3LH0
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BU of 3lh0 by Molmil
Crystal structure of the 53BP1 tandem tudor domain in complex with p53K372me2
分子名称: DIMETHYLATED p53 LYSINE 372 PEPTIDE, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Roy, S, Kutateladze, T.G.
登録日2010-01-21
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insight into p53 recognition by the 53BP1 tandem Tudor domain.
J.Mol.Biol., 398, 2010
3LM5
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BU of 3lm5 by Molmil
Crystal Structure of human Serine/Threonine Kinase 17B (STK17B) in complex with Quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, Serine/threonine-protein kinase 17B
著者Ugochukwu, E, Soundararajan, M, Rellos, P, Fedorov, O, Phillips, C, Wang, J, Hapka, E, Filippakopoulos, P, Chaikuad, A, Pike, A.C.W, Carpenter, L, Vollmar, M, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2010-01-29
公開日2010-03-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献A Chemical Probe for Dark Kinase STK17B Derives Its Potency and High Selectivity through a Unique P-Loop Conformation.
J.Med.Chem., 63, 2020
3LGF
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BU of 3lgf by Molmil
Crystal structure of the 53BP1 tandem tudor domain in complex with p53K370me2
分子名称: DIMETHYLATED p53 Lysine 370 PEPTIDE, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Roy, S, Kutateladze, T.G.
登録日2010-01-20
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insight into p53 recognition by the 53BP1 tandem Tudor domain.
J.Mol.Biol., 398, 2010
3LGL
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BU of 3lgl by Molmil
Crystal structure of the 53BP1 tandem tudor domain in complex with p53K382me2
分子名称: DIMETHYLATED p53 LYSINE 382 PEPTIDE, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Roy, S, Kutateladze, T.G.
登録日2010-01-20
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insight into p53 recognition by the 53BP1 tandem Tudor domain.
J.Mol.Biol., 398, 2010
3RM1
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BU of 3rm1 by Molmil
1.24 Angstrom X-ray structure of bovine TRTK12-Ca(2+)-S100B D63N
分子名称: CALCIUM ION, F-actin-capping protein subunit alpha-2, Protein S100-B
著者Liriano, M.A, Weber, D.J.
登録日2011-04-20
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N
To be Published
2NLI
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BU of 2nli by Molmil
Crystal Structure of the complex between L-lactate oxidase and a substrate analogue at 1.59 angstrom resolution
分子名称: FLAVIN MONONUCLEOTIDE, HYDROGEN PEROXIDE, LACTIC ACID, ...
著者Furuichi, M, Suzuki, N, Balasundaresan, D, Yoshida, Y, Minagawa, H, Watanabe, Y, Kaneko, H, Waga, I, Kumar, P.K.R, Mizuno, H.
登録日2006-10-20
公開日2007-10-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献X-ray structures of Aerococcus viridans lactate oxidase and its complex with D-lactate at pH 4.5 show an alpha-hydroxyacid oxidation mechanism
J.Mol.Biol., 378, 2008
3RLZ
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BU of 3rlz by Molmil
2.0 Angstrom X-ray structure of bovine Ca(2+)-S100B D63N
分子名称: CALCIUM ION, Protein S100-B
著者Liriano, M.A, Weber, D.J.
登録日2011-04-20
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N
To be Published

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