Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2EJN
DownloadVisualize
BU of 2ejn by Molmil
Structural characterization of the tetrameric form of the major cat allergen fel D 1
分子名称: CALCIUM ION, Major allergen I polypeptide chain 1, chain 2
著者Kaiser, L, Velickovic, T.C, Badia-Martinez, D, Adedoyin, J, Thunberg, S, Hallen, D, Berndt, K, Gronlund, H, Gafvelin, G, van Hage, M, Achour, A.
登録日2007-03-19
公開日2007-04-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural characterization of the tetrameric form of the major cat allergen Fel d 1
J.Mol.Biol., 370, 2007
7CN4
DownloadVisualize
BU of 7cn4 by Molmil
Cryo-EM structure of bat RaTG13 spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Wang, X, Zhang, S, Qiao, S, Yu, J, Zeng, J, Tian, L.
登録日2020-07-30
公開日2021-03-03
最終更新日2021-03-24
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Bat and pangolin coronavirus spike glycoprotein structures provide insights into SARS-CoV-2 evolution.
Nat Commun, 12, 2021
2ELA
DownloadVisualize
BU of 2ela by Molmil
Crystal Structure of the PTB domain of human APPL1
分子名称: Adapter protein containing PH domain, PTB domain and leucine zipper motif 1
著者Li, J, Mao, X, Dong, L.Q, Liu, F, Tong, L.
登録日2007-03-27
公開日2007-05-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of the BAR-PH and PTB Domains of Human APPL1
Structure, 15, 2007
7UYY
DownloadVisualize
BU of 7uyy by Molmil
The crystal structure of the Pseudomonas aeruginosa aldehyde dehydrogenase encoded by the PA4189 gene in complex with NADH
分子名称: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Gonzalez-Segura, L, Juarez-Vazquez, A.L, Munoz-Clares, R.A.
登録日2022-05-07
公開日2023-02-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The uncharacterized Pseudomonas aeruginosa PA4189 is a novel and efficient aminoacetaldehyde dehydrogenase.
Biochem.J., 480, 2023
2OC8
DownloadVisualize
BU of 2oc8 by Molmil
Structure of Hepatitis C Viral NS3 protease domain complexed with NS4A peptide and ketoamide SCH503034
分子名称: BETA-MERCAPTOETHANOL, Hepatitis C virus, ZINC ION, ...
著者Prongay, A.J, Guo, Z, Yao, N, Fischmann, T, Strickland, C, Myers, J, Weber, P.C, Malcolm, B, Beyer, B.M, Ingram, R, Pichardo, J, Hong, Z, Prosise, W.W, Ramanathan, L, Taremi, S.S, Yarosh-Tomaine, T, Zhang, R, Senior, M, Yang, R.S, Arasappan, A, Bennett, F, Bogen, S.L, Chen, K, Jao, E, Liu, Y.T, Lovey, R.G, Saksena, A.K, Venkatraman, S, Girijavallabhan, V, Njoroge, F.G, Madison, V.
登録日2006-12-20
公開日2007-07-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Discovery of the HCV NS3/4A protease inhibitor (1R,5S)-N-[3-amino-1-(cyclobutylmethyl)-2,3-dioxopropyl]-3- [2(S)-[[[(1,1-dimethylethyl)amino]carbonyl]amino]-3,3-dimethyl-1-oxobutyl]- 6,6-dimethyl-3-azabicyclo[3.1.0]hexan-2(S)-carboxamide (Sch 503034) II. Key steps in structure-based optimization.
J.Med.Chem., 50, 2007
5KNL
DownloadVisualize
BU of 5knl by Molmil
Crystal structure of S. pombe ubiquitin E1 (Uba1) in complex with Ubc15 and ubiquitin
分子名称: SULFATE ION, Ubiquitin, Ubiquitin-activating enzyme E1 1, ...
著者Olsen, S.K, Lv, Z, Yuan, L, Williams, K.
登録日2016-06-28
公開日2017-02-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献S. pombe Uba1-Ubc15 Structure Reveals a Novel Regulatory Mechanism of Ubiquitin E2 Activity.
Mol. Cell, 65, 2017
7V2U
DownloadVisualize
BU of 7v2u by Molmil
The complex structure of SoBcmB and its product 2f
分子名称: (1S,5S,6S)-5-methyl-1-[(1S,2S)-2-methyl-1,2,3-tris(oxidanyl)propyl]-2-oxa-7,9-diazabicyclo[4.2.2]decane-8,10-dione, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-09
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.00009918 Å)
主引用文献The complex structure of SoBcmB and its product 2f
To Be Published
7V34
DownloadVisualize
BU of 7v34 by Molmil
The complex structure of soBcmB and its product 1d
分子名称: (3S,4S,5S,8S)-8-[(2S)-butan-2-yl]-3-methyl-3,4-bis(oxidanyl)-1-oxa-7,10-diazaspiro[4.5]decane-6,9-dione, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.000169 Å)
主引用文献The complex structure of SoBcmB and its side way product
To Be Published
7V36
DownloadVisualize
BU of 7v36 by Molmil
The complex structure of soBcmB and its intermediate product 2a
分子名称: (3Z,6S)-3-[(2R)-2-methyl-2,3-bis(oxidanyl)propylidene]-6-[(2S)-4-oxidanylbutan-2-yl]piperazine-2,5-dione, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96009171 Å)
主引用文献The complex structure of SoBcmB and its intermediate product
To Be Published
7V3N
DownloadVisualize
BU of 7v3n by Molmil
The complex structure of soBcmB-D307A and its natural precursor 2
分子名称: (3S,6S)-3-((R)-2,3-dihydroxy-2-methylpropyl)-6-((S)-4-hydroxybutan-2-yl)piperazine-2,5-dione, 2-OXOGLUTARIC ACID, FE (II) ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.850011 Å)
主引用文献The complex structure of SoBcmB mutant D307A and its substrate
To Be Published
1D31
DownloadVisualize
BU of 1d31 by Molmil
THE THREE-DIMENSIONAL STRUCTURES OF BULGE-CONTAINING DNA FRAGMENTS
分子名称: DNA (5'-D(*CP*GP*CP*AP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
著者Joshua-Tor, L, Frolow, F, Appella, E, Hope, H, Rabinovich, D, Sussman, J.L.
登録日1991-04-25
公開日1992-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Three-dimensional structures of bulge-containing DNA fragments.
J.Mol.Biol., 225, 1992
5KW2
DownloadVisualize
BU of 5kw2 by Molmil
The extra-helical binding site of GPR40 and the structural basis for allosteric agonism and incretin stimulation
分子名称: (3~{S})-3-cyclopropyl-3-[2-[1-[2-[2,2-dimethylpropyl-(6-methylpyridin-2-yl)carbamoyl]-5-methoxy-phenyl]piperidin-4-yl]-1-benzofuran-6-yl]propanoic acid, Free fatty acid receptor 1,Lysozyme,Free fatty acid receptor 1
著者Ho, J.D, Chau, B, Rodgers, L, Lu, F, Wilbur, K.L, Otto, K.A, Chen, Y, Song, M, Riley, J.P, Yang, H.-C, Reynolds, N.A, Kahl, S.D, Lewis, A.P, Groshong, C, Madsen, R.E, Conners, K, Linswala, J.P, Gheyi, T, Saflor, M.D, Lee, M.R, Benach, J, Baker, K.A, Montrose-Rafizadeh, C, Genin, M.J, Miller, A.R, Hamdouchi, C.
登録日2016-07-15
公開日2018-05-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structural basis for GPR40 allosteric agonism and incretin stimulation.
Nat Commun, 9, 2018
7V2X
DownloadVisualize
BU of 7v2x by Molmil
The complex structure of soBcmB and its substrate 1
分子名称: (3S,6S)-3-[(2S)-butan-2-yl]-6-[(2R)-2-methyl-2,3-bis(oxidanyl)propyl]piperazine-2,5-dion, 2-OXOGLUTARIC ACID, FE (II) ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08387423 Å)
主引用文献The crystal structure of SoBcmB and its side way substrate
To Be Published
7V3O
DownloadVisualize
BU of 7v3o by Molmil
The structure of Se-SoBcmB with Fe(II)and AKG
分子名称: 2-OXOGLUTARIC ACID, CHLORIDE ION, FE (II) ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
実験手法X-RAY DIFFRACTION (1.83004665 Å)
主引用文献The apo structure of SoBcmB with Fe(II)
To Be Published
7CMZ
DownloadVisualize
BU of 7cmz by Molmil
Crystal Structure of BRCT7/8 in Complex with the APS Motif of PHF8
分子名称: DNA topoisomerase 2-binding protein 1, Histone lysine demethylase PHF8, POTASSIUM ION, ...
著者Che, S.Y, Ma, S, Cao, C, Yao, Z, Shi, L, Yang, N.
登録日2020-07-29
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.695 Å)
主引用文献PHF8-promoted TOPBP1 demethylation drives ATR activation and preserves genome stability.
Sci Adv, 7, 2021
4RXF
DownloadVisualize
BU of 4rxf by Molmil
Fructose-6-phosphate aldolase Y131F from E.coli
分子名称: Fructose-6-phosphate aldolase 1, PHOSPHATE ION
著者Stellmacher, L, Sandalova, T, Leptihn, S, Schneider, G, Sprenger, G.A, Samland, A.K.
登録日2014-12-11
公開日2015-10-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Acid Base Catalyst Discriminates between a Fructose 6-Phosphate Aldolase and a Transaldolase
ChemCatChem, 2015
4WZV
DownloadVisualize
BU of 4wzv by Molmil
Crystal structure of a hydroxamate based inhibitor EN140 in complex with the MMP-9 catalytic domain
分子名称: (2R)-4-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-N-hydroxy-2-{[(4'-methoxybiphenyl-4-yl)sulfonyl](propan-2-yloxy)amino}butanamide, 1,2-ETHANEDIOL, AZIDE ION, ...
著者Stura, E.A, Vera, L, Cassar-Lajeunesse, E, Nuti, E, Dive, V, Rossello, A.
登録日2014-11-20
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献N-O-Isopropyl Sulfonamido-Based Hydroxamates as Matrix Metalloproteinase Inhibitors: Hit Selection and in Vivo Antiangiogenic Activity.
J.Med.Chem., 58, 2015
4WXO
DownloadVisualize
BU of 4wxo by Molmil
SadC (300-487) from Pseudomonas aeruginosa PAO1
分子名称: Uncharacterized protein
著者Liu, C, Liu, S, Gu, L.
登録日2014-11-14
公開日2015-11-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Crystal structure of SadC (300-487) from Pseudomonas aeruginosa PAO1
To Be Published
4X1Q
DownloadVisualize
BU of 4x1q by Molmil
The crystal structure of mupain-1 in complex with murinised human uPA at pH7.4
分子名称: Urokinase-type plasminogen activator, mupain-1
著者Jiang, L, Zhao, B, Xu, P, Andreasen, P, Huang, M.
登録日2014-11-25
公開日2015-03-25
最終更新日2015-11-04
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献A cyclic peptidic serine protease inhibitor: increasing affinity by increasing peptide flexibility.
Plos One, 9, 2014
4X0W
DownloadVisualize
BU of 4x0w by Molmil
The crystal structure of mupain-1-17 in complex with murinised human uPA
分子名称: SULFATE ION, Urokinase-type plasminogen activator, mupain-1-17, ...
著者Jiang, L, Zhao, B, Xu, P, Andreasen, P, Huang, M.
登録日2014-11-24
公開日2015-10-21
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Distinctive binding modes and inhibitory mechanisms of two peptidic inhibitors of urokinase-type plasminogen activator with isomeric P1 residues.
Int.J.Biochem.Cell Biol., 62, 2015
7TQ8
DownloadVisualize
BU of 7tq8 by Molmil
Structure of MERS 3CL protease in complex with the cyclopropane based inhibitor 14d
分子名称: (1R,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2S)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid, (1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2S)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid, Orf1a protein, ...
著者Liu, L, Lovell, S, Battaile, K.P, Nguyen, H.N, Chamandi, S.D, Picard, H.R, Madden, T.K, Thruman, H.A, Kim, Y, Groutas, W.C, Chang, K.O.
登録日2022-01-26
公開日2022-03-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Broad-Spectrum Cyclopropane-Based Inhibitors of Coronavirus 3C-like Proteases: Biochemical, Structural, and Virological Studies.
Acs Pharmacol Transl Sci, 6, 2023
7TZP
DownloadVisualize
BU of 7tzp by Molmil
Crystal Structure of Putataive Short-Chain Dehydrogenase/Reductase (FabG) from Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 in Complex with NADH
分子名称: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3-oxoacyl-ACP reductase, ...
著者Minasov, G, Shuvalova, L, Dubrovska, I, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-02-16
公開日2022-03-02
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
4X1P
DownloadVisualize
BU of 4x1p by Molmil
The crystal structure of mupain-1-17 in complex with murinised human uPA at pH4.6
分子名称: MUPAIN-1-17, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Jiang, L, Zhao, B, Xu, P, Andreasen, P, Huang, M.
登録日2014-11-25
公開日2015-10-21
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Distinctive binding modes and inhibitory mechanisms of two peptidic inhibitors of urokinase-type plasminogen activator with isomeric P1 residues.
Int.J.Biochem.Cell Biol., 62, 2015
7C9N
DownloadVisualize
BU of 7c9n by Molmil
Crystal structure of SETDB1 tudor domain in complexed with Compound 1.
分子名称: 3,5-dimethyl-2-[[(3R,5R)-1-methyl-5-phenyl-piperidin-3-yl]amino]pyrrolo[3,2-d]pyrimidin-4-one, Histone-lysine N-methyltransferase SETDB1
著者Guo, Y, Xiong, L, Mao, X, Yang, S.
登録日2020-06-06
公開日2021-04-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.472 Å)
主引用文献Structure-Guided Discovery of a Potent and Selective Cell-Active Inhibitor of SETDB1 Tudor Domain.
Angew.Chem.Int.Ed.Engl., 60, 2021
4X4O
DownloadVisualize
BU of 4x4o by Molmil
Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix and CTP
分子名称: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, G70A tRNA minihelix, ...
著者Kuhn, C.-D, Joshua-Tor, L.
登録日2014-12-03
公開日2015-02-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献On-Enzyme Refolding Permits Small RNA and tRNA Surveillance by the CCA-Adding Enzyme.
Cell, 160, 2015

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon